BDGP Sequence Production Resources |
Search the DGRC for GH04113
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 41 |
Well: | 13 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1809-RA |
Protein status: | GH04113.pep: gold |
Preliminary Size: | 1708 |
Sequenced Size: | 1679 |
Gene | Date | Evidence |
---|---|---|
CG1809 | 2001-01-01 | Release 2 assignment |
CG1809 | 2001-09-19 | Blastp of sequenced clone |
CG1809 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1809 | 2008-04-29 | Release 5.5 accounting |
CG1809 | 2008-08-15 | Release 5.9 accounting |
CG1809 | 2008-12-18 | 5.12 accounting |
1679 bp (1679 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058289
> GH04113.complete CTGACCTCCACACCACGCCTGGGATTAGCTGAAAATGGCCAGGAGATTCA TTCTGTTGCTCGTCTTAGCTGTCTGCCTGAGCGGAAGTGCCAGCGGACAA AGAGACCACCCTCGTGGGCGTTCCTTTGATGCCGAATCGCATCCGATCAA GTATGCAGAGGAGCAGCAGACCCAGTACTGGGTGGATAAGGCCCAGGCGA AGCTGTTATCGAAGCTGGCCGAGCAGGAGTCCGCGACCACAAACAAGGCG AAGAACGTGATTCTGTTCCTGGGCGATGGAATGTCCGTTCACACGGTCAC GGCCACCAGGAATCTGCTAGGCGACAGTGCGGAGCAGGTGTACTTTGAGG GATTTCCCTACACTGGCTTGTCCAAGACCTACTGCGTAAACCGCCAGGTG GCCGATTCTGCTTGCACGGCCACCGCCTATTTGGGCGGTGTGAAGGCGAA CTATGGAACGATTGGCGTTAACGCCAATGTGTCCAGGTACAGCTGTGATG GCGCCGCCAACGAGGAGGATCGGGTGCTCAGCATCGCGCATTGGGCACAG GCGGCTGGCAAGGATGCAGGTCTGGTGACTACAGCCCGGGTAACTCATGC ATCCCCAGCTGGTGTTTATGCCCACATCGCGGATCGCAATTGGGAGAACG ACTGGGAGGTGGCCAACAGGGAGTGCGATCCCGAGCAGACCATCGATATT GCCCGTCAGCTCGTGGAGCAGCCTGTGGGTCAGCAGCTGAAGGTAATCCT TGGAGGCGGTCGCAAGAACTTCATCGACGCAACGGTAAATGATGAGGAGG GTTATCCCGGCAAGCGTACCGACGGTCGTCACTTAATCCGCAGTTGGTTG GATCAGAAGAAGGAGGCCAATGTCTCAGCCAAATACGTGTGGAGTCGCAA GGGACTCAGTCTGGTGGATCTCGAGAATACGGACTACCTATTGGGTCTCT TTGCCAATGATCATCTGCCGTACAACGGTGATCGGGACAGGAAACGTAGT CAGTTGGCGGATCCTTCGCTGAGTGAGCTCACGGAGGCTGCCATCACGGT GTTGAGCCGCAATGACAAGGGATTCTTTCTCTTCGTCGAGGGTGCTCGTA TCGACATGGCCCACCACGATACCTTCGCCAAGAGATCCCTCGAGGATACC GCCGAGTTTGCGAGGGCTGTCCAGAAGGCTCGCGAACTTACCTCCGAGGA TGACACACTGATCGTGGTGACCGCTGATCATGCTCATGTTATGTCCATCA ATGGTTATCCTTATCGTGACCAGGAGATCACCGGATTGGCTCAACTGGCG GATGATAATCTGCCCTATACGATTTTGTCCTATGCCAATGGACCTGGCTA CTACTCCGGCTACAATCGCGCTGAGGGACGTGCCCTTCTAAAGGAGAAGT TGGTTGCGGACTCAGACTATCAGTATCCCACGCTGGCGCCCTTGGACGCA GAAACCCACGGAGGAGATGATGTGGCGGTGTATGCCTCGGGACCCTATGC CCAGTACTTCAGTGGCAACTACGAGCAAAGCAATATTCCGGCGCTGATGG CCAGAGCAGCGGGTATCGGGCCCTATGCCTAGGATTTGGCTGATTTTCTT GGCGCATGTAAAACTCCTCTCGCTGAGATGGAATAATTAAAATGCATCAT TGCTAAACGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5449742..5450900 | 103..1261 | 5795 | 100 | Plus |
chr2R | 21145070 | chr2R | 5450969..5451366 | 1262..1659 | 1990 | 100 | Plus |
chr2R | 21145070 | chr2R | 5449160..5449263 | 1..104 | 520 | 100 | Plus |
chr3R | 27901430 | chr3R | 5321195..5321278 | 373..456 | 210 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9562247..9563405 | 103..1261 | 5795 | 100 | Plus |
2R | 25286936 | 2R | 9563474..9563873 | 1262..1661 | 2000 | 100 | Plus |
2R | 25286936 | 2R | 9561665..9561768 | 1..104 | 520 | 100 | Plus |
3R | 32079331 | 3R | 9495347..9495436 | 373..462 | 225 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9563446..9564604 | 103..1261 | 5795 | 100 | Plus |
2R | 25260384 | 2R | 9564673..9565072 | 1262..1661 | 2000 | 100 | Plus |
2R | 25260384 | 2R | 9562864..9562967 | 1..104 | 520 | 100 | Plus |
3R | 31820162 | 3R | 9236200..9236267 | 395..462 | 220 | 88.2 | Plus |
3L | 28103327 | 3L | 5587316..5587371 | 306..251 | 175 | 87.5 | Minus |
3L | 28103327 | 3L | 5586977..5587086 | 651..542 | 175 | 77.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5449160..5449263 | 1..104 | 100 | -> | Plus |
chr2R | 5449744..5450900 | 105..1261 | 100 | -> | Plus |
chr2R | 5450969..5451366 | 1262..1659 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1809-RA | 1..1548 | 35..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1809-RA | 1..1548 | 35..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1809-RA | 1..1548 | 35..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1809-RA | 1..1548 | 35..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1809-RA | 1..1548 | 35..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1809-RA | 17..1675 | 1..1659 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1809-RA | 17..1675 | 1..1659 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1809-RA | 28..1686 | 1..1659 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1809-RA | 17..1675 | 1..1659 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1809-RA | 28..1686 | 1..1659 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9561665..9561768 | 1..104 | 100 | -> | Plus |
2R | 9563474..9563871 | 1262..1659 | 100 | Plus | |
2R | 9562249..9563405 | 105..1261 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9561665..9561768 | 1..104 | 100 | -> | Plus |
2R | 9563474..9563871 | 1262..1659 | 100 | Plus | |
2R | 9562249..9563405 | 105..1261 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9561665..9561768 | 1..104 | 100 | -> | Plus |
2R | 9563474..9563871 | 1262..1659 | 100 | Plus | |
2R | 9562249..9563405 | 105..1261 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5450979..5451376 | 1262..1659 | 100 | Plus | |
arm_2R | 5449170..5449273 | 1..104 | 100 | -> | Plus |
arm_2R | 5449754..5450910 | 105..1261 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9562864..9562967 | 1..104 | 100 | -> | Plus |
2R | 9563448..9564604 | 105..1261 | 100 | -> | Plus |
2R | 9564673..9565070 | 1262..1659 | 100 | Plus |
Translation from 34 to 1581
> GH04113.pep MARRFILLLVLAVCLSGSASGQRDHPRGRSFDAESHPIKYAEEQQTQYWV DKAQAKLLSKLAEQESATTNKAKNVILFLGDGMSVHTVTATRNLLGDSAE QVYFEGFPYTGLSKTYCVNRQVADSACTATAYLGGVKANYGTIGVNANVS RYSCDGAANEEDRVLSIAHWAQAAGKDAGLVTTARVTHASPAGVYAHIAD RNWENDWEVANRECDPEQTIDIARQLVEQPVGQQLKVILGGGRKNFIDAT VNDEEGYPGKRTDGRHLIRSWLDQKKEANVSAKYVWSRKGLSLVDLENTD YLLGLFANDHLPYNGDRDRKRSQLADPSLSELTEAAITVLSRNDKGFFLF VEGARIDMAHHDTFAKRSLEDTAEFARAVQKARELTSEDDTLIVVTADHA HVMSINGYPYRDQEITGLAQLADDNLPYTILSYANGPGYYSGYNRAEGRA LLKEKLVADSDYQYPTLAPLDAETHGGDDVAVYASGPYAQYFSGNYEQSN IPALMARAAGIGPYA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12475-PA | 516 | GF12475-PA | 1..516 | 1..515 | 2349 | 84.9 | Plus |
Dana\GF10455-PA | 525 | GF10455-PA | 11..519 | 8..515 | 1558 | 58.8 | Plus |
Dana\GF17216-PA | 543 | GF17216-PA | 6..528 | 4..512 | 1238 | 50.3 | Plus |
Dana\GF23560-PA | 523 | GF23560-PA | 5..508 | 4..513 | 1129 | 48.4 | Plus |
Dana\GF23984-PA | 517 | GF23984-PA | 5..510 | 3..512 | 1081 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24085-PA | 515 | GG24085-PA | 1..515 | 1..515 | 2671 | 96.3 | Plus |
Dere\GG14123-PA | 524 | GG14123-PA | 1..517 | 1..515 | 1515 | 56.6 | Plus |
Dere\GG16809-PA | 546 | GG16809-PA | 62..530 | 42..511 | 1215 | 52.8 | Plus |
Dere\GG13235-PA | 529 | GG13235-PA | 3..508 | 2..513 | 1136 | 48 | Plus |
Dere\GG15026-PA | 522 | GG15026-PA | 57..515 | 43..512 | 1108 | 49.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19931-PA | 524 | GH19931-PA | 10..520 | 6..515 | 1827 | 68.8 | Plus |
Dgri\GH16243-PA | 525 | GH16243-PA | 36..518 | 25..515 | 1479 | 58.2 | Plus |
Dgri\GH18436-PA | 542 | GH18436-PA | 58..525 | 43..511 | 1226 | 53.1 | Plus |
Dgri\GH15376-PA | 523 | GH15376-PA | 34..505 | 42..513 | 1154 | 51.7 | Plus |
Dgri\GH15197-PA | 525 | GH15197-PA | 20..518 | 10..512 | 1102 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Alp6-PA | 515 | CG1809-PA | 1..515 | 1..515 | 2679 | 100 | Plus |
Alp10-PA | 524 | CG10592-PA | 11..517 | 5..515 | 1488 | 57.9 | Plus |
phu-PA | 546 | CG8147-PA | 1..528 | 1..509 | 1187 | 49.4 | Plus |
Alp1-PA | 523 | CG5656-PA | 3..508 | 2..513 | 1101 | 47.8 | Plus |
Alp5-PA | 522 | CG10827-PA | 57..515 | 43..512 | 1093 | 50.1 | Plus |
Alp1-PB | 530 | CG5656-PB | 3..515 | 2..513 | 1084 | 47.2 | Plus |
Alp9-PB | 517 | CG5150-PB | 48..510 | 43..512 | 1041 | 46.5 | Plus |
Alp9-PA | 517 | CG5150-PA | 48..510 | 43..512 | 1041 | 46.5 | Plus |
Alp8-PB | 533 | CG3264-PB | 6..525 | 3..512 | 908 | 39.7 | Plus |
Alp8-PA | 533 | CG3264-PA | 6..525 | 3..512 | 908 | 39.7 | Plus |
Alp2-PA | 538 | CG3290-PA | 37..525 | 20..512 | 897 | 40.3 | Plus |
Alp7-PA | 543 | CG3292-PA | 64..533 | 42..512 | 864 | 41.5 | Plus |
Alp12-PE | 596 | CG16771-PE | 70..581 | 5..514 | 824 | 38 | Plus |
Alp12-PD | 596 | CG16771-PD | 70..581 | 5..514 | 824 | 38 | Plus |
Alp12-PC | 596 | CG16771-PC | 70..581 | 5..514 | 824 | 38 | Plus |
Alp12-PB | 596 | CG16771-PB | 70..581 | 5..514 | 824 | 38 | Plus |
Alp12-PA | 596 | CG16771-PA | 70..581 | 5..514 | 824 | 38 | Plus |
Alp4-PA | 596 | CG1462-PA | 47..542 | 39..513 | 800 | 38.6 | Plus |
Alp4-PB | 502 | CG1462-PB | 1..448 | 83..513 | 737 | 39.1 | Plus |
Alp11-PA | 483 | CG8105-PA | 31..467 | 38..512 | 721 | 37.4 | Plus |
Alp13-PB | 479 | CG5361-PB | 30..364 | 6..352 | 212 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19888-PA | 524 | GI19888-PA | 8..520 | 5..515 | 1826 | 66.9 | Plus |
Dmoj\GI13179-PA | 525 | GI13179-PA | 37..519 | 25..515 | 1540 | 60.6 | Plus |
Dmoj\GI24012-PA | 547 | GI24012-PA | 61..529 | 43..511 | 1203 | 52.4 | Plus |
Dmoj\GI12980-PA | 503 | GI12980-PA | 14..488 | 41..513 | 1110 | 49.6 | Plus |
Dmoj\GI12135-PA | 526 | GI12135-PA | 56..519 | 43..512 | 1110 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17170-PA | 520 | GL17170-PA | 1..515 | 1..514 | 2165 | 78.9 | Plus |
Dper\GL12007-PA | 538 | GL12007-PA | 1..530 | 1..514 | 1466 | 56.6 | Plus |
Dper\GL23248-PA | 525 | GL23248-PA | 59..517 | 43..512 | 1097 | 49.5 | Plus |
Dper\GL16938-PA | 533 | GL16938-PA | 35..523 | 20..512 | 935 | 42.5 | Plus |
Dper\GL13610-PA | 392 | GL13610-PA | 56..392 | 37..380 | 892 | 53.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14786-PA | 520 | GA14786-PA | 1..516 | 1..515 | 2177 | 79.3 | Plus |
Dpse\GA10422-PA | 537 | GA10422-PA | 1..531 | 1..515 | 1478 | 56.7 | Plus |
Dpse\GA20850-PA | 543 | GA20850-PA | 55..527 | 37..511 | 1244 | 53.9 | Plus |
Dpse\GA24639-PA | 521 | GA24639-PA | 34..506 | 42..513 | 1105 | 48.7 | Plus |
Dpse\GA10582-PA | 525 | GA10582-PA | 59..517 | 43..512 | 1102 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21133-PA | 515 | GM21133-PA | 1..515 | 1..515 | 2701 | 98.1 | Plus |
Dsec\GM13909-PA | 524 | GM13909-PA | 11..517 | 5..515 | 1536 | 58.3 | Plus |
Dsec\GM23808-PA | 546 | GM23808-PA | 61..528 | 41..509 | 1212 | 52.7 | Plus |
Dsec\GM22140-PA | 523 | GM22140-PA | 3..508 | 2..513 | 1130 | 48 | Plus |
Dsec\GM15118-PA | 522 | GM15118-PA | 35..515 | 22..512 | 1115 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13186-PA | 524 | GD13186-PA | 11..517 | 5..515 | 1537 | 58.3 | Plus |
Dsim\GD18617-PA | 546 | GD18617-PA | 1..528 | 1..509 | 1215 | 49.3 | Plus |
Dsim\GD20021-PA | 521 | GD20021-PA | 35..514 | 22..512 | 1049 | 47.3 | Plus |
Dsim\GD13892-PA | 511 | GD13892-PA | 48..504 | 43..512 | 1017 | 45.8 | Plus |
Dsim\GD25137-PA | 533 | GD25137-PA | 46..525 | 30..512 | 885 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15058-PA | 524 | GJ15058-PA | 24..520 | 22..515 | 1846 | 70.4 | Plus |
Dvir\GJ11955-PA | 528 | GJ11955-PA | 15..522 | 6..515 | 1545 | 59.1 | Plus |
Dvir\GJ23643-PA | 545 | GJ23643-PA | 61..528 | 43..511 | 1237 | 53.8 | Plus |
Dvir\GJ10462-PA | 520 | GJ10462-PA | 53..511 | 43..512 | 1140 | 51.3 | Plus |
Dvir\GJ13123-PA | 521 | GJ13123-PA | 41..506 | 48..513 | 1124 | 51.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21822-PA | 520 | GK21822-PA | 19..516 | 18..515 | 1761 | 67.9 | Plus |
Dwil\GK16879-PA | 530 | GK16879-PA | 10..524 | 7..515 | 1524 | 57.8 | Plus |
Dwil\GK10963-PA | 547 | GK10963-PA | 60..530 | 42..511 | 1225 | 52.4 | Plus |
Dwil\GK11139-PA | 529 | GK11139-PA | 58..515 | 43..512 | 1115 | 49.9 | Plus |
Dwil\GK16996-PA | 534 | GK16996-PA | 52..519 | 47..513 | 1114 | 50.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19286-PA | 515 | GE19286-PA | 1..515 | 1..515 | 2643 | 95 | Plus |
Dyak\GE20547-PA | 524 | GE20547-PA | 10..517 | 5..515 | 1553 | 59.1 | Plus |
Dyak\GE25953-PA | 548 | GE25953-PA | 64..532 | 42..511 | 1205 | 52.4 | Plus |
Dyak\GE22974-PA | 523 | GE22974-PA | 3..508 | 2..513 | 1129 | 47.8 | Plus |
Dyak\GE22333-PA | 523 | GE22333-PA | 3..508 | 2..513 | 1125 | 47.6 | Plus |
Translation from 34 to 1581
> GH04113.hyp MARRFILLLVLAVCLSGSASGQRDHPRGRSFDAESHPIKYAEEQQTQYWV DKAQAKLLSKLAEQESATTNKAKNVILFLGDGMSVHTVTATRNLLGDSAE QVYFEGFPYTGLSKTYCVNRQVADSACTATAYLGGVKANYGTIGVNANVS RYSCDGAANEEDRVLSIAHWAQAAGKDAGLVTTARVTHASPAGVYAHIAD RNWENDWEVANRECDPEQTIDIARQLVEQPVGQQLKVILGGGRKNFIDAT VNDEEGYPGKRTDGRHLIRSWLDQKKEANVSAKYVWSRKGLSLVDLENTD YLLGLFANDHLPYNGDRDRKRSQLADPSLSELTEAAITVLSRNDKGFFLF VEGARIDMAHHDTFAKRSLEDTAEFARAVQKARELTSEDDTLIVVTADHA HVMSINGYPYRDQEITGLAQLADDNLPYTILSYANGPGYYSGYNRAEGRA LLKEKLVADSDYQYPTLAPLDAETHGGDDVAVYASGPYAQYFSGNYEQSN IPALMARAAGIGPYA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1809-PA | 515 | CG1809-PA | 1..515 | 1..515 | 2679 | 100 | Plus |
CG10592-PA | 524 | CG10592-PA | 11..517 | 5..515 | 1488 | 57.9 | Plus |
CG8147-PA | 546 | CG8147-PA | 1..528 | 1..509 | 1187 | 49.4 | Plus |
CG5656-PA | 523 | CG5656-PA | 3..508 | 2..513 | 1101 | 47.8 | Plus |
CG10827-PA | 522 | CG10827-PA | 57..515 | 43..512 | 1093 | 50.1 | Plus |