BDGP Sequence Production Resources |
Search the DGRC for GH04180
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 41 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | CG16758-RB |
Protein status: | GH04180.pep: gold |
Sequenced Size: | 1556 |
Gene | Date | Evidence |
---|---|---|
CG16758 | 2003-01-01 | Sim4 clustering to Release 3 |
CG16758 | 2004-03-31 | Blastp of sequenced clone |
CG16758 | 2008-04-29 | Release 5.5 accounting |
CG16758 | 2008-08-15 | Release 5.9 accounting |
CG16758 | 2008-12-18 | 5.12 accounting |
1556 bp (1556 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012502
> GH04180.complete GTCGAGCAGGCAACAAACGTGAAGAAAGTGCACATAGTACCATACCACAT ATATGTGCATACCATATCATCGAGTTCTGGACGCGGTCATAAAATATCAT TTGTGAAACGTAACGAGATTACAAAAGGAATTCCAGTTCCAGATTTCTAA ATTAGTTTTGATTCGCGAAATAGAAAACGTGCACAGTTGATTTTATCATA ACTTGAAGCGCGAAATTCACATTTGCATAACCAGAAGAAGCGCGTCCGAG GCGATTATATAATTGCAGTGTATTTCGATTGAGCAAGAGCATCTCCAACT TCAGCTGCACAATGACGGGTTACAAGGTGGCCAATGGCAATGGACACAGC AATGGAAATGGAAACACGAAGGGAACAAATGGAACCAATGGACACAGCAA TGGACACAAGTCGGCGGACTACACCGCCCAGGAGAATCCCACCGGAAATG GAAAAATCCAATGCGAGCTTACGCACGAAGAGCTAAGAGCCCTTCGGGTT CTCAACGAAGACACGTATCCCTATGAGGTCATCGAGGAGATCGCCGACTT CATTACCAAGGGGTCCGGCATGCGCCCCAAGATCGGCATCATCTGCGGCT CTGGGCTAGGCTCATTGGCCGATATGATCCAGGACCCGAAGATCTTCGAG TATGAGAAGATCCCCAACTTCCCGGTATCTACAGTTGAGGGCCATGCCGG ACGACTGGTGGTCGGCACACTCGAGGGCGCCACTGTGATGGCGATGCAGG GCAGGTTCCACTTCTACGAGGGCTATCCGCTGGCCAAGTGCTCAATGCCG GTTCGCGTGATGAAGCTGTGCGGTGTGGAATACCTGTTCGCCACCAATGC GGCTGGTGGAATCAATCCACGGTTCGCGGTGGGCGACATCATGCTGATGC ATGACCATGTCAACATGCTGGGCTTTGCCGGAAATTCTCCGCTCCAGGGA CCCAATGACCCACGCTTCGGACCCCGCTTTCCCGCCCTGGTGAACTCGTA CAACAAGGACCTAATCAACAAGGCCATCGAGATCGCCAAGGCCATGGGCA TAGAGTCCAACATTCACGTCGGCGTATACTCCTGTCTGGGTGGTCCCAAC TACGAGACCATCGCCGAGCTGAAGGCCCTGCGCATGATGGGCGTGGATGC GGTGGGCATGTCCACCGTACATGAGGTCATCACTGCACGGCACTGCGACA TGAAGGTATTCGCCTTCAGCCTCATCACAAATAAGTGCGCCACCGAGTAC AGCGATAAGAAGGACGATGAGGCCAACCACGATGAGGTTATGGCTGTGGC CAAGAACAGGCAAAAGGCCTGCTGCGAACTGGTCTCCCGACTCATCCGGG AAATCCACTTGGCATCCGCTTAAGTAGCGAAGCGAAGAAGTAGCGTTGGA TTCTAAATTTAAAAATAGTTAATTCTCTGAGCTCGCATCTAAGACTCACA TGACACGGATTGTCCAAAATCTTACAGTATAGGCCTAGGGAATAGTTTAA CTAAATTATGTAAAATAAACTAGCTATATCACAATTTCAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16758-RB | 2506 | CG16758-RB | 301..1839 | 1..1539 | 7695 | 100 | Plus |
CG16758.a | 3016 | CG16758.a | 811..2349 | 1..1539 | 7695 | 100 | Plus |
CG16758-RD | 2434 | CG16758-RD | 740..1767 | 512..1539 | 5140 | 100 | Plus |
CG16758-RD | 2434 | CG16758-RD | 301..742 | 1..442 | 2210 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 2499201..2499979 | 1288..510 | 3880 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 2502655..2503096 | 442..1 | 2165 | 99.3 | Minus |
chr3L | 24539361 | chr3L | 2498884..2499137 | 1538..1285 | 1270 | 100 | Minus |
chr3L | 24539361 | chr3L | 2500580..2500653 | 516..443 | 370 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 2499689..2500467 | 1288..510 | 3880 | 99.9 | Minus |
3L | 28110227 | 3L | 2503143..2503584 | 442..1 | 2210 | 100 | Minus |
3L | 28110227 | 3L | 2499371..2499625 | 1539..1285 | 1275 | 100 | Minus |
3L | 28110227 | 3L | 2501068..2501141 | 516..443 | 370 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 2499689..2500467 | 1288..510 | 3880 | 99.8 | Minus |
3L | 28103327 | 3L | 2503143..2503584 | 442..1 | 2210 | 100 | Minus |
3L | 28103327 | 3L | 2499371..2499625 | 1539..1285 | 1275 | 100 | Minus |
3L | 28103327 | 3L | 2501068..2501141 | 516..443 | 370 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2498884..2499135 | 1287..1538 | 100 | <- | Minus |
chr3L | 2499203..2499974 | 515..1286 | 100 | <- | Minus |
chr3L | 2500582..2500653 | 443..514 | 100 | <- | Minus |
chr3L | 2502655..2503096 | 1..442 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RB | 1..1062 | 312..1373 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RB | 1..1062 | 312..1373 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RB | 1..1062 | 312..1373 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RB | 1..1062 | 312..1373 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RB | 1..1062 | 312..1373 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RB | 1..1538 | 1..1538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RB | 1..1538 | 1..1538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RB | 23..1560 | 1..1538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RB | 1..1538 | 1..1538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RB | 23..1560 | 1..1538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2501070..2501141 | 443..514 | 100 | <- | Minus |
3L | 2499372..2499623 | 1287..1538 | 100 | <- | Minus |
3L | 2499691..2500462 | 515..1286 | 100 | <- | Minus |
3L | 2503143..2503584 | 1..442 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2501070..2501141 | 443..514 | 100 | <- | Minus |
3L | 2499372..2499623 | 1287..1538 | 100 | <- | Minus |
3L | 2499691..2500462 | 515..1286 | 100 | <- | Minus |
3L | 2503143..2503584 | 1..442 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2501070..2501141 | 443..514 | 100 | <- | Minus |
3L | 2499372..2499623 | 1287..1538 | 100 | <- | Minus |
3L | 2499691..2500462 | 515..1286 | 100 | <- | Minus |
3L | 2503143..2503584 | 1..442 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2499372..2499623 | 1287..1538 | 100 | <- | Minus |
arm_3L | 2499691..2500462 | 515..1286 | 100 | <- | Minus |
arm_3L | 2501070..2501141 | 443..514 | 100 | <- | Minus |
arm_3L | 2503143..2503584 | 1..442 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2499372..2499623 | 1287..1538 | 100 | <- | Minus |
3L | 2499691..2500462 | 515..1286 | 100 | <- | Minus |
3L | 2501070..2501141 | 443..514 | 100 | <- | Minus |
3L | 2503143..2503584 | 1..442 | 100 | Minus |
Translation from 311 to 1372
> GH04180.pep MTGYKVANGNGHSNGNGNTKGTNGTNGHSNGHKSADYTAQENPTGNGKIQ CELTHEELRALRVLNEDTYPYEVIEEIADFITKGSGMRPKIGIICGSGLG SLADMIQDPKIFEYEKIPNFPVSTVEGHAGRLVVGTLEGATVMAMQGRFH FYEGYPLAKCSMPVRVMKLCGVEYLFATNAAGGINPRFAVGDIMLMHDHV NMLGFAGNSPLQGPNDPRFGPRFPALVNSYNKDLINKAIEIAKAMGIESN IHVGVYSCLGGPNYETIAELKALRMMGVDAVGMSTVHEVITARHCDMKVF AFSLITNKCATEYSDKKDDEANHDEVMAVAKNRQKACCELVSRLIREIHL ASA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24862-PA | 418 | GF24862-PA | 111..417 | 47..353 | 1559 | 92.8 | Plus |
Dana\GF11825-PA | 337 | GF11825-PA | 45..327 | 69..349 | 624 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14512-PA | 351 | GG14512-PA | 1..350 | 1..352 | 1821 | 96.9 | Plus |
Dere\GG20005-PA | 338 | GG20005-PA | 45..336 | 69..350 | 629 | 42.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15756-PA | 390 | GH15756-PA | 1..387 | 1..349 | 1527 | 76.3 | Plus |
Dgri\GH20577-PA | 323 | GH20577-PA | 46..320 | 69..349 | 715 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16758-PB | 353 | CG16758-PB | 1..353 | 1..353 | 1866 | 100 | Plus |
CG16758-PH | 396 | CG16758-PH | 1..396 | 1..353 | 1812 | 89.1 | Plus |
CG16758-PD | 329 | CG16758-PD | 1..329 | 1..353 | 1706 | 93.2 | Plus |
CG16758-PG | 372 | CG16758-PG | 1..372 | 1..353 | 1702 | 89 | Plus |
CG16758-PF | 328 | CG16758-PF | 44..328 | 69..353 | 1494 | 100 | Plus |
CG16758-PE | 321 | CG16758-PE | 37..321 | 69..353 | 1494 | 100 | Plus |
CG18128-PA | 339 | CG18128-PA | 45..337 | 69..350 | 626 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12534-PA | 392 | GI12534-PA | 1..389 | 1..349 | 1516 | 74.8 | Plus |
Dmoj\GI19771-PA | 323 | GI19771-PA | 44..320 | 67..349 | 654 | 43 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17590-PA | 330 | GL17590-PA | 44..327 | 67..349 | 734 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14131-PA | 396 | GA14131-PA | 1..396 | 1..352 | 1535 | 75.3 | Plus |
Dpse\GA14805-PA | 333 | GA14805-PA | 44..330 | 67..349 | 722 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14117-PA | 396 | GM14117-PA | 1..396 | 1..353 | 1819 | 88.1 | Plus |
Dsec\GM15517-PA | 339 | GM15517-PA | 45..337 | 69..350 | 628 | 42.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13387-PA | 396 | GD13387-PA | 1..396 | 1..353 | 1815 | 87.9 | Plus |
Dsim\GD25021-PA | 339 | GD25021-PA | 45..337 | 69..350 | 638 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16051-PA | 408 | GJ16051-PA | 102..408 | 46..352 | 1525 | 90.9 | Plus |
Dvir\GJ18292-PA | 325 | GJ18292-PA | 48..322 | 69..349 | 756 | 52.1 | Plus |
Translation from 311 to 1372
> GH04180.hyp MTGYKVANGNGHSNGNGNTKGTNGTNGHSNGHKSADYTAQENPTGNGKIQ CELTHEELRALRVLNEDTYPYEVIEEIADFITKGSGMRPKIGIICGSGLG SLADMIQDPKIFEYEKIPNFPVSTVEGHAGRLVVGTLEGATVMAMQGRFH FYEGYPLAKCSMPVRVMKLCGVEYLFATNAAGGINPRFAVGDIMLMHDHV NMLGFAGNSPLQGPNDPRFGPRFPALVNSYNKDLINKAIEIAKAMGIESN IHVGVYSCLGGPNYETIAELKALRMMGVDAVGMSTVHEVITARHCDMKVF AFSLITNKCATEYSDKKDDEANHDEVMAVAKNRQKACCELVSRLIREIHL ASA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16758-PB | 353 | CG16758-PB | 1..353 | 1..353 | 1866 | 100 | Plus |
CG16758-PH | 396 | CG16758-PH | 1..396 | 1..353 | 1812 | 89.1 | Plus |
CG16758-PD | 329 | CG16758-PD | 1..329 | 1..353 | 1706 | 93.2 | Plus |
CG16758-PG | 372 | CG16758-PG | 1..372 | 1..353 | 1702 | 89 | Plus |
CG16758-PE | 321 | CG16758-PE | 37..321 | 69..353 | 1494 | 100 | Plus |