BDGP Sequence Production Resources |
Search the DGRC for GH04236
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 42 |
Well: | 36 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7971-RB |
Protein status: | GH04236.pep: gold |
Preliminary Size: | 1391 |
Sequenced Size: | 1209 |
Gene | Date | Evidence |
---|---|---|
CG7971 | 2001-01-01 | Release 2 assignment |
CG7971 | 2002-12-11 | Blastp of sequenced clone |
CG7971 | 2008-04-29 | Release 5.5 accounting |
CG7971 | 2008-08-15 | Release 5.9 accounting |
CG7971 | 2008-12-18 | 5.12 accounting |
1209 bp (1209 high quality bases) assembled on 2002-12-11
GenBank Submission: BT003620
> GH04236.complete ATTATTTTGAGTGAAAGACATCCGCATGTCCGGGCAAGCGGACTGAAATC TAAGCACTCCTTAGCTAATTTAACAATCTAGATAGGTGAAACATCATCCA TATTTAAGCCTTTTTTGAGCTAATCAAGCTAGTCTTAAAGACGCACCCCG GAGGAAATTAAGTCGCAGGTGGACTCCTTCCGCCAGAAGTTGATGGGACA GGGCAAAACAGATCTGGCCAAAGATGAATTCGGACGCGTAGCTGCTCGCG ACACCCATCAAATAGCCGAGGCTCAACAGCAGAAGAACGCCAGGCTGCGC GAGGCCTTCAACATATCCGAGTACTTTGTCGAGGGCAGCAGCTTCGACGG TGATCGCAAGGCGAAGGAGGACCTGGCCAAAAGCGTGGCTCTCCAAAAGG AACTGGACGCCCAGCGCGAGAGCCTGGCAGCGGCGGCAGCTGCCGCAGCA GCCGGCAAGGACAAGGAGACCGGGAAGCGGTATGCCCTAGTGCGTACTCC TTCCCGCGAACGGGATCGCGATGCTGGCGATGCGGCAGCCAATGGCGACG AACGCGATCATGTCTCCAAGACGGACAAGAAGAAGCGCAAGAAGCGCGCC AGAGAGAGTTCGGCCAGTCCTGAGCGCAAGAAGAAGAAGAAGTCGAAGAA GCACAAGAAAGAGAGGTAAGAGTCCTGGCCGGAATCCGAAACTTGAAACC CTCGACAATCGTAGCTTTGTGTTTGTTTCCTTTGCTCTTTCTTTGGACTC TACAGTCATGACTTTTGATTTGTTCCTTATCGTACATAGTAAACTGTAAA CACGTGCGCTTAGAGCGTGAAAACCAATGATACTATGTAACTATCAATCA ACTGCTTAATACATTTTGTTTTTCGTCTCTACTCCTTCTTTTACATTGCA TTTGAAACCACAAAAGGGACTCATATGAGAAAGAAAGTAAAAAGAAGCGA AAAGCCACGTACAAATGACTCACACTTAGTTTTAACAAAGCTAACACTAT TCAACAAGCTATAAGAACCAATCCAATCAAGTGAAATGTTTCAAATGCCT TTCTGCAATATATACTTTCGATATCCTAACACTTGCCAAGACAATCTTTT ATTTGAATCCGTGTGCAGCGAGAGTGAGTAGAGTGATCAGGGATCTAAGT ACGTATGGGTTCTCCACTAGCCAACAACAGCGACAGCAACCACAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1660174..1660743 | 1176..607 | 2850 | 100 | Minus |
chr3L | 24539361 | chr3L | 1660803..1661168 | 608..243 | 1815 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 1663643..1663782 | 140..1 | 670 | 98.6 | Minus |
chr3L | 24539361 | chr3L | 1663473..1663580 | 242..135 | 510 | 98.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1660598..1661167 | 1176..607 | 2850 | 100 | Minus |
3L | 28110227 | 3L | 1661227..1661592 | 608..243 | 1830 | 100 | Minus |
3L | 28110227 | 3L | 1664090..1664229 | 140..1 | 700 | 100 | Minus |
3L | 28110227 | 3L | 1663920..1664027 | 242..135 | 525 | 99.1 | Minus |
2L | 23513712 | 2L | 14358321..14358360 | 1169..1208 | 200 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1660598..1661167 | 1176..607 | 2850 | 100 | Minus |
3L | 28103327 | 3L | 1661227..1661592 | 608..243 | 1830 | 100 | Minus |
3L | 28103327 | 3L | 1664090..1664229 | 140..1 | 700 | 100 | Minus |
3L | 28103327 | 3L | 1663920..1664027 | 242..135 | 525 | 99 | Minus |
2L | 23513712 | 2L | 14358321..14358360 | 1169..1208 | 200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1660174..1660741 | 609..1176 | 92 | <- | Minus |
chr3L | 1660803..1661168 | 243..608 | 99 | <- | Minus |
chr3L | 1663473..1663574 | 141..242 | 99 | <- | Minus |
chr3L | 1663643..1663782 | 1..140 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7971-RC | 239..770 | 140..674 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7971-RC | 239..770 | 140..674 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7971-RC | 239..770 | 140..674 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7971-RC | 239..770 | 140..674 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7971-RC | 239..770 | 140..674 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7971-RB | 1..1173 | 4..1176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7971-RB | 1..1173 | 4..1176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7971-RB | 13..1187 | 1..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7971-RB | 1..1173 | 4..1176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7971-RB | 13..1187 | 1..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1660598..1661165 | 609..1176 | 100 | <- | Minus |
3L | 1661227..1661592 | 243..608 | 100 | <- | Minus |
3L | 1663920..1664021 | 141..242 | 100 | <- | Minus |
3L | 1664090..1664229 | 1..140 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1660598..1661165 | 609..1176 | 100 | <- | Minus |
3L | 1661227..1661592 | 243..608 | 100 | <- | Minus |
3L | 1663920..1664021 | 141..242 | 100 | <- | Minus |
3L | 1664090..1664229 | 1..140 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1660598..1661165 | 609..1176 | 100 | <- | Minus |
3L | 1661227..1661592 | 243..608 | 100 | <- | Minus |
3L | 1663920..1664021 | 141..242 | 100 | <- | Minus |
3L | 1664090..1664229 | 1..140 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1660598..1661165 | 609..1176 | 100 | <- | Minus |
arm_3L | 1661227..1661592 | 243..608 | 100 | <- | Minus |
arm_3L | 1663920..1664021 | 141..242 | 100 | <- | Minus |
arm_3L | 1664090..1664229 | 1..140 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1664090..1664229 | 1..140 | 100 | Minus | |
3L | 1660598..1661165 | 609..1176 | 100 | <- | Minus |
3L | 1661227..1661592 | 243..608 | 100 | <- | Minus |
3L | 1663920..1664021 | 141..242 | 100 | <- | Minus |
Translation from 192 to 668
> GH04236.pep MGQGKTDLAKDEFGRVAARDTHQIAEAQQQKNARLREAFNISEYFVEGSS FDGDRKAKEDLAKSVALQKELDAQRESLAAAAAAAAAGKDKETGKRYALV RTPSRERDRDAGDAAANGDERDHVSKTDKKKRKKRARESSASPERKKKKK SKKHKKER*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24975-PA | 1051 | GF24975-PA | 98..241 | 1..144 | 516 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14576-PA | 1051 | GG14576-PA | 98..237 | 1..143 | 623 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15516-PA | 1158 | GH15516-PA | 98..245 | 1..144 | 563 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7971-PB | 158 | CG7971-PB | 1..158 | 1..158 | 785 | 100 | Plus |
CG7971-PH | 174 | CG7971-PH | 1..158 | 1..158 | 785 | 100 | Plus |
CG7971-PG | 1062 | CG7971-PG | 98..254 | 1..157 | 780 | 100 | Plus |
CG7971-PA | 1062 | CG7971-PA | 98..254 | 1..157 | 780 | 100 | Plus |
CG7971-PC | 1107 | CG7971-PC | 98..254 | 1..157 | 780 | 100 | Plus |
CG7971-PF | 1655 | CG7971-PF | 339..479 | 17..157 | 694 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16794-PA | 1128 | GI16794-PA | 98..252 | 1..144 | 575 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23474-PA | 1099 | GA23474-PA | 98..244 | 1..143 | 523 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14188-PA | 725 | GM14188-PA | 98..254 | 1..157 | 791 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13454-PA | 1066 | GD13454-PA | 98..254 | 1..157 | 798 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12538-PA | 1083 | GJ12538-PA | 98..243 | 1..144 | 496 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17071-PA | 1358 | GK17071-PA | 370..519 | 1..143 | 395 | 68.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20934-PA | 1080 | GE20934-PA | 98..241 | 1..143 | 631 | 96.5 | Plus |
Translation from 192 to 668
> GH04236.hyp MGQGKTDLAKDEFGRVAARDTHQIAEAQQQKNARLREAFNISEYFVEGSS FDGDRKAKEDLAKSVALQKELDAQRESLAAAAAAAAAGKDKETGKRYALV RTPSRERDRDAGDAAANGDERDHVSKTDKKKRKKRARESSASPERKKKKK SKKHKKER*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7971-PB | 158 | CG7971-PB | 1..158 | 1..158 | 785 | 100 | Plus |
CG7971-PH | 174 | CG7971-PH | 1..158 | 1..158 | 785 | 100 | Plus |
CG7971-PG | 1062 | CG7971-PG | 98..254 | 1..157 | 780 | 100 | Plus |
CG7971-PA | 1062 | CG7971-PA | 98..254 | 1..157 | 780 | 100 | Plus |
CG7971-PC | 1107 | CG7971-PC | 98..254 | 1..157 | 780 | 100 | Plus |