BDGP Sequence Production Resources |
Search the DGRC for GH04238
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 42 |
Well: | 38 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5597-RA |
Protein status: | GH04238.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 915 |
Gene | Date | Evidence |
---|---|---|
CG5597 | 2001-01-01 | Release 2 assignment |
CG5597 | 2002-05-17 | Blastp of sequenced clone |
CG5597 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5597 | 2008-04-29 | Release 5.5 accounting |
CG5597 | 2008-08-15 | Release 5.9 accounting |
CG5597 | 2008-12-18 | 5.12 accounting |
915 bp (915 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118734
> GH04238.complete CCGAGCGGACCGCTGAGTTAGGATCGGTTGAGAAGTCTGGCATACGAGTG GAAGTGGAAGTGTAGATAGGATAGTGACCGTTATGGATACCCTGCTGATC GCCATTCTGGCCATCGGACTGCTCCACAGAGATGCGCTATGCTATCCCAC GAGGGATGAGTCCGAGGACAAGATTATAGTCCTTCAGAACGAGGAGATGG AGCCCACGATCCTGGACTGCGACTACGAGGTGGAGGAGAGCCCGAAGTTC ATCACCGTCAAATGGTACAGAGACGACAAGTCCATATACCAGTGGATCTT CGGAACACCTCCATATGCCATCCCCGAGTTCAGGAACGAGATTGACAGCA CCTATGAGAGCTCCACGGAGCCGAGCAAGCAGTACAGCTCGCTGGCTTTG ATCAACCCCACGATCGCCACCACCGGCGACTACAAGTGCGTGGTGCAGAC CTCGCTGAACACCTTCTCCAGCCACCAGAGGGTTCAGGTCATAGACCTGA GGAACTACACCCTGGAGCTGTCCCACAAGACGATCCACAATGAGACGCAG CTGAACTGCACCGTGACGAACGTGTATCCCAGGCCCACCATCACGATAAT ATCCAACGACATGGACGTGGTGAAGCGGGAGCCCATGGTGTACGAGAACG AGGAGGGATACTTCGATGGCAGCGCCGTGGTGGCGGCCTACGACACCGAC GACGATCCCGATGCCTACCAGTGCGTGGTGTCCTTCGAGGGATACGGCAA GAACCTGACCACGGTGGCCACGTCCGCGGCGGCGGGCAGGAGCCACGTCG ACTTCAGCCTGTGGCTGTTTTGTTTTCTGTACTACCTGCTCTGCAAGCTG AAGGTATTGGCCTAAATAAAAGCGTTGTTATTTATTGTTACTAAATTAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19774524..19774820 | 601..897 | 1485 | 100 | Plus |
chr2R | 21145070 | chr2R | 19774168..19774445 | 323..600 | 1390 | 100 | Plus |
chr2R | 21145070 | chr2R | 19773915..19774107 | 130..322 | 965 | 100 | Plus |
chr2R | 21145070 | chr2R | 19773039..19773169 | 1..131 | 655 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23888481..23888779 | 601..899 | 1495 | 100 | Plus |
2R | 25286936 | 2R | 23888125..23888402 | 323..600 | 1390 | 100 | Plus |
2R | 25286936 | 2R | 23887872..23888064 | 130..322 | 965 | 100 | Plus |
2R | 25286936 | 2R | 23886996..23887126 | 1..131 | 655 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23889680..23889978 | 601..899 | 1495 | 100 | Plus |
2R | 25260384 | 2R | 23889324..23889601 | 323..600 | 1390 | 100 | Plus |
2R | 25260384 | 2R | 23889071..23889263 | 130..322 | 965 | 100 | Plus |
2R | 25260384 | 2R | 23888195..23888325 | 1..131 | 655 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19773039..19773169 | 1..131 | 100 | -> | Plus |
chr2R | 19773917..19774107 | 132..322 | 100 | -> | Plus |
chr2R | 19774168..19774445 | 323..600 | 100 | -> | Plus |
chr2R | 19774524..19774820 | 601..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5597-RA | 1..783 | 83..865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5597-RA | 1..783 | 83..865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5597-RA | 1..783 | 83..865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5597-RA | 1..783 | 83..865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5597-RA | 1..783 | 83..865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5597-RA | 23..919 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5597-RA | 23..919 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5597-RA | 24..920 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5597-RA | 23..919 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5597-RA | 24..920 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23886996..23887126 | 1..131 | 100 | -> | Plus |
2R | 23887874..23888064 | 132..322 | 100 | -> | Plus |
2R | 23888125..23888402 | 323..600 | 100 | -> | Plus |
2R | 23888481..23888777 | 601..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23886996..23887126 | 1..131 | 100 | -> | Plus |
2R | 23887874..23888064 | 132..322 | 100 | -> | Plus |
2R | 23888125..23888402 | 323..600 | 100 | -> | Plus |
2R | 23888481..23888777 | 601..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23886996..23887126 | 1..131 | 100 | -> | Plus |
2R | 23887874..23888064 | 132..322 | 100 | -> | Plus |
2R | 23888125..23888402 | 323..600 | 100 | -> | Plus |
2R | 23888481..23888777 | 601..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19774519..19774649 | 1..131 | 100 | -> | Plus |
arm_2R | 19775397..19775587 | 132..322 | 100 | -> | Plus |
arm_2R | 19775648..19775925 | 323..600 | 100 | -> | Plus |
arm_2R | 19776004..19776300 | 601..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23889342..23889619 | 323..600 | 100 | -> | Plus |
2R | 23889698..23889994 | 601..897 | 100 | Plus | |
2R | 23888213..23888343 | 1..131 | 100 | -> | Plus |
2R | 23889091..23889281 | 132..322 | 100 | -> | Plus |
Translation from 82 to 864
> GH04238.hyp MDTLLIAILAIGLLHRDALCYPTRDESEDKIIVLQNEEMEPTILDCDYEV EESPKFITVKWYRDDKSIYQWIFGTPPYAIPEFRNEIDSTYESSTEPSKQ YSSLALINPTIATTGDYKCVVQTSLNTFSSHQRVQVIDLRNYTLELSHKT IHNETQLNCTVTNVYPRPTITIISNDMDVVKREPMVYENEEGYFDGSAVV AAYDTDDDPDAYQCVVSFEGYGKNLTTVATSAAAGRSHVDFSLWLFCFLY YLLCKLKVLA*
Translation from 82 to 864
> GH04238.pep MDTLLIAILAIGLLHRDALCYPTRDESEDKIIVLQNEEMEPTILDCDYEV EESPKFITVKWYRDDKSIYQWIFGTPPYAIPEFRNEIDSTYESSTEPSKQ YSSLALINPTIATTGDYKCVVQTSLNTFSSHQRVQVIDLRNYTLELSHKT IHNETQLNCTVTNVYPRPTITIISNDMDVVKREPMVYENEEGYFDGSAVV AAYDTDDDPDAYQCVVSFEGYGKNLTTVATSAAAGRSHVDFSLWLFCFLY YLLCKLKVLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12870-PA | 261 | GF12870-PA | 1..260 | 1..259 | 1005 | 69.6 | Plus |
Dana\GF13550-PA | 262 | GF13550-PA | 39..178 | 35..175 | 184 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22897-PA | 260 | GG22897-PA | 1..259 | 1..259 | 1282 | 91.9 | Plus |
Dere\GG22809-PA | 263 | GG22809-PA | 39..177 | 33..173 | 171 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21689-PA | 235 | GH21689-PA | 6..232 | 20..241 | 562 | 49.3 | Plus |
Dgri\GH21798-PA | 263 | GH21798-PA | 41..177 | 35..173 | 184 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5597-PA | 260 | CG5597-PA | 1..260 | 1..260 | 1373 | 100 | Plus |
CG13532-PA | 263 | CG13532-PA | 39..177 | 33..173 | 168 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18843-PA | 260 | GI18843-PA | 18..260 | 19..260 | 699 | 56.1 | Plus |
Dmoj\GI20547-PA | 263 | GI20547-PA | 41..177 | 35..173 | 186 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11173-PA | 260 | GL11173-PA | 1..259 | 1..259 | 960 | 67.3 | Plus |
Dper\GL10131-PA | 261 | GL10131-PA | 39..187 | 35..183 | 192 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18997-PA | 260 | GA18997-PA | 1..259 | 1..259 | 960 | 67.3 | Plus |
Dpse\GA12347-PA | 261 | GA12347-PA | 39..187 | 35..183 | 192 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16057-PA | 260 | GM16057-PA | 1..260 | 1..260 | 1376 | 98.8 | Plus |
Dsec\GM13667-PA | 135 | GM13667-PA | 1..135 | 39..173 | 713 | 98.5 | Plus |
Dsec\GM15966-PA | 263 | GM15966-PA | 39..177 | 33..173 | 171 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11805-PA | 260 | GD11805-PA | 1..260 | 1..260 | 1372 | 98.8 | Plus |
Dsim\GD11718-PA | 263 | GD11718-PA | 39..177 | 33..173 | 171 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21874-PA | 258 | GJ21874-PA | 13..257 | 16..259 | 738 | 56.5 | Plus |
Dvir\GJ22400-PA | 263 | GJ22400-PA | 41..177 | 35..173 | 184 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15917-PA | 582 | GK15917-PA | 328..577 | 8..252 | 829 | 61.7 | Plus |
Dwil\GK15667-PA | 374 | GK15667-PA | 191..354 | 18..181 | 621 | 67.1 | Plus |
Dwil\GK20788-PA | 261 | GK20788-PA | 42..175 | 38..173 | 186 | 31.4 | Plus |