BDGP Sequence Production Resources |
Search the DGRC for GH04269
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 42 |
Well: | 69 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3253-RA |
Protein status: | GH04269.pep: gold |
Preliminary Size: | 1590 |
Sequenced Size: | 1462 |
Gene | Date | Evidence |
---|---|---|
CG3253 | 2001-01-01 | Release 2 assignment |
CG3253 | 2001-07-04 | Blastp of sequenced clone |
CG3253 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3253 | 2008-04-29 | Release 5.5 accounting |
CG3253 | 2008-08-15 | Release 5.9 accounting |
CG3253 | 2008-12-18 | 5.12 accounting |
1462 bp (1462 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047534
> GH04269.complete TTATTAAGGTTGTGTTTTCCTGATAAATAACTGCATTGTGATACTCGATT GCTCGAATGATGTGCCACATATCAAACTGGAGTTCCCTGAAAATAGTGCT GGCCTTTCTCTCGGTCAACATCTTCTGGCTCCTGAAGGTGTATCCCCCGG CAGGAGATGGTGCGCAGAGGTGTCCGCCCACTCCCCAAAGTCCCGTGGCC GTAGAGTGTCCCTAGCATTCGGATATCGCCTATGCGCTGCTCCAGCCGCT TAACAACATGGACGGCTTCGTGGTCCCGAACAACTCCGCGTCTCTGGCCT TCGATAACATCAACTTGAGCTACGGCCGCTGGGACAACCAGCTGCTGTAC AGGATCAAAGACTTTGCTCTGCTAGGCGAGCAGTACGTAGACTCCTCGGA GGGCAGCTTGGTGTGCCTGGCCACCCAGACTTCAGTGGAGCGCCTCAACT CGCTTCCCCAGGTGGCAGCCAATTGGCAGGGCAAGATGTCCGTGGCCCTG TTTGCAGCTGGGCCCGAGGAGTTTGTAGTCCTGCAATACTTCGTTACCTA TATGCGCCTGTGCTTCGCAAACATACGCGAGAATGCCACCTTTCACTTGC TCACACCGAGGGACTTCGACAAGCTGCCCCGAGTAGCCGCACTTCCCCTT AACATGAGGGGCAAATTCGACTGCCAGTACCCGGATAGGACGCTCAAGGC CCTGCTCAAGTTCCGCTCCCTGAAGACCCTGCAGTGGCGACAGAGGAACA CCTATCCGCAGAACCACATGAGGAACCTGGCACGCAAGGGGTGCCAGACG AAGTACGTCTTTCTCACCGACATCGACATTGTTCCCAGCACCAACAGTGT GCCCCAGCTGAACCACTTCTTCAGGACAGCCAATTGCACGAAGAGTTGTG CCTACGTAATCCCCACATTTGAAATAGACGTTAGGGCTACGTTTCCCCGC TCCAAGAATGCGTTAGTGCGCCTGATAAGGAAAGGACTAGCTAGGCCTTT TCACGAAAAGGTCTTCATCTATAACCAATATGCCACTAATTTCTCCAAGT GGCTGTCCCCCAACACAAATGAAACGGAAGTATCCGTCAGCCATGTTGTA ACGAACTTTGAATTCCTGTATGAACCATTCTACATAGCAGTGGACAACGC ACCAGCGCACGACGAACGATTTCTGGGTTATGGGTTCACCAGGAACTCCC AGGTTTATGAGATGCACATTGCTGGCTATCAGTTCTACGTCCTTTCCCCT GTGTTTACCGGTCATTGGGGATTGCAGAGGAAGCAGGCCAGACCCGCTTG GCGGGAGCAACAGAATAATGCGAATCGCCGGAAGTTCGACGTTTTCAAAA GCGAAATATTCGTGCGGTACAAAAACGATCCACGCCTGCTGTTAAAGGCC AAAAAGAATCAAATCCTAGTAAAATAAATAAAATAGTTAAAATTAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3253-RA | 1963 | CG3253-RA | 345..1789 | 1..1445 | 7225 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20000848..20001836 | 62..1050 | 4810 | 99.1 | Plus |
chr2R | 21145070 | chr2R | 20002103..20002347 | 1200..1444 | 1225 | 100 | Plus |
chr2R | 21145070 | chr2R | 20001896..20002051 | 1049..1204 | 780 | 100 | Plus |
chr2R | 21145070 | chr2R | 20000730..20000791 | 1..62 | 295 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24114860..24115848 | 62..1050 | 4945 | 100 | Plus |
2R | 25286936 | 2R | 24116115..24116360 | 1200..1445 | 1230 | 100 | Plus |
2R | 25286936 | 2R | 24115908..24116063 | 1049..1204 | 780 | 100 | Plus |
2R | 25286936 | 2R | 24114742..24114803 | 1..62 | 310 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24116059..24117047 | 62..1050 | 4945 | 100 | Plus |
2R | 25260384 | 2R | 24117314..24117559 | 1200..1445 | 1230 | 100 | Plus |
2R | 25260384 | 2R | 24117107..24117262 | 1049..1204 | 780 | 100 | Plus |
2R | 25260384 | 2R | 24115941..24116002 | 1..62 | 310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20000730..20000791 | 1..62 | 98 | -> | Plus |
chr2R | 20000849..20001834 | 63..1048 | 99 | -> | Plus |
chr2R | 20001896..20002049 | 1049..1202 | 100 | -> | Plus |
chr2R | 20002106..20002347 | 1203..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3253-RA | 1..1170 | 258..1427 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3253-RA | 1..1170 | 258..1427 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3253-RA | 1..1170 | 258..1427 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3253-RA | 1..1170 | 258..1427 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3253-RA | 1..1170 | 258..1427 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3253-RA | 76..1519 | 1..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3253-RA | 76..1519 | 1..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3253-RA | 90..1533 | 1..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3253-RA | 76..1519 | 1..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3253-RA | 90..1533 | 1..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24114742..24114803 | 1..62 | 100 | -> | Plus |
2R | 24114861..24115846 | 63..1048 | 100 | -> | Plus |
2R | 24115908..24116061 | 1049..1202 | 100 | -> | Plus |
2R | 24116118..24116359 | 1203..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24114742..24114803 | 1..62 | 100 | -> | Plus |
2R | 24114861..24115846 | 63..1048 | 100 | -> | Plus |
2R | 24115908..24116061 | 1049..1202 | 100 | -> | Plus |
2R | 24116118..24116359 | 1203..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24114742..24114803 | 1..62 | 100 | -> | Plus |
2R | 24114861..24115846 | 63..1048 | 100 | -> | Plus |
2R | 24115908..24116061 | 1049..1202 | 100 | -> | Plus |
2R | 24116118..24116359 | 1203..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20003431..20003584 | 1049..1202 | 100 | -> | Plus |
arm_2R | 20003641..20003882 | 1203..1444 | 100 | Plus | |
arm_2R | 20002265..20002326 | 1..62 | 100 | -> | Plus |
arm_2R | 20002384..20003369 | 63..1048 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24116078..24117063 | 63..1048 | 100 | -> | Plus |
2R | 24117125..24117278 | 1049..1202 | 100 | -> | Plus |
2R | 24117335..24117576 | 1203..1444 | 100 | Plus | |
2R | 24115959..24116020 | 1..62 | 100 | -> | Plus |
Translation from 257 to 1426
> GH04269.pep MDGFVVPNNSASLAFDNINLSYGRWDNQLLYRIKDFALLGEQYVDSSEGS LVCLATQTSVERLNSLPQVAANWQGKMSVALFAAGPEEFVVLQYFVTYMR LCFANIRENATFHLLTPRDFDKLPRVAALPLNMRGKFDCQYPDRTLKALL KFRSLKTLQWRQRNTYPQNHMRNLARKGCQTKYVFLTDIDIVPSTNSVPQ LNHFFRTANCTKSCAYVIPTFEIDVRATFPRSKNALVRLIRKGLARPFHE KVFIYNQYATNFSKWLSPNTNETEVSVSHVVTNFEFLYEPFYIAVDNAPA HDERFLGYGFTRNSQVYEMHIAGYQFYVLSPVFTGHWGLQRKQARPAWRE QQNNANRRKFDVFKSEIFVRYKNDPRLLLKAKKNQILVK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11373-PA | 377 | GF11373-PA | 1..377 | 13..389 | 1889 | 90.2 | Plus |
Dana\GF15654-PA | 411 | GF15654-PA | 19..385 | 10..352 | 256 | 25 | Plus |
Dana\GF14302-PA | 574 | GF14302-PA | 187..556 | 2..389 | 235 | 24.1 | Plus |
Dana\GF14309-PA | 398 | GF14309-PA | 103..388 | 38..309 | 176 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22943-PA | 389 | GG22943-PA | 1..389 | 1..389 | 2047 | 96.9 | Plus |
Dere\GG10238-PA | 407 | GG10238-PA | 45..391 | 27..367 | 257 | 25.1 | Plus |
Dere\GG24282-PA | 548 | GG24282-PA | 162..530 | 3..389 | 224 | 24.4 | Plus |
Dere\GG24286-PA | 470 | GG24286-PA | 117..441 | 38..351 | 217 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20168-PA | 208 | GH20168-PA | 1..207 | 171..377 | 940 | 82.1 | Plus |
Dgri\GH10688-PA | 542 | GH10688-PA | 182..524 | 27..389 | 234 | 24.5 | Plus |
Dgri\GH10695-PA | 449 | GH10695-PA | 93..441 | 38..371 | 196 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3253-PB | 389 | CG3253-PB | 1..389 | 1..389 | 2061 | 100 | Plus |
CG3253-PA | 389 | CG3253-PA | 1..389 | 1..389 | 2061 | 100 | Plus |
CG15483-PA | 407 | CG15483-PA | 50..363 | 34..336 | 254 | 25.9 | Plus |
CG11149-PE | 475 | CG11149-PE | 143..430 | 64..336 | 207 | 27.1 | Plus |
CG11149-PD | 475 | CG11149-PD | 143..430 | 64..336 | 207 | 27.1 | Plus |
CG11149-PC | 475 | CG11149-PC | 143..430 | 64..336 | 207 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18863-PA | 385 | GI18863-PA | 6..385 | 1..380 | 1561 | 72.4 | Plus |
Dmoj\GI11204-PA | 532 | GI11204-PA | 172..514 | 27..389 | 232 | 24.2 | Plus |
Dmoj\GI11232-PA | 458 | GI11232-PA | 128..454 | 64..385 | 219 | 26.4 | Plus |
Dmoj\GI21341-PA | 390 | GI21341-PA | 47..358 | 43..347 | 191 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11668-PA | 312 | GL11668-PA | 6..189 | 1..184 | 775 | 80.4 | Plus |
Dper\GL11668-PA | 312 | GL11668-PA | 186..312 | 263..389 | 643 | 89.8 | Plus |
Dper\GL26639-PA | 471 | GL26639-PA | 127..467 | 52..384 | 225 | 27.8 | Plus |
Dper\GL19727-PA | 637 | GL19727-PA | 283..620 | 41..372 | 211 | 22.4 | Plus |
Dper\GL19115-PA | 240 | GL19115-PA | 70..222 | 212..389 | 145 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16964-PA | 506 | GA16964-PA | 6..375 | 1..370 | 1706 | 85.4 | Plus |
Dpse\GA21591-PA | 561 | GA21591-PA | 174..543 | 2..389 | 238 | 24.6 | Plus |
Dpse\GA10796-PA | 471 | GA10796-PA | 127..467 | 52..384 | 229 | 28.4 | Plus |
Dpse\GA13763-PA | 411 | GA13763-PA | 57..394 | 41..372 | 207 | 22 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18308-PA | 408 | GM18308-PA | 53..408 | 1..389 | 1826 | 89.2 | Plus |
Dsec\GM25976-PA | 407 | GM25976-PA | 50..390 | 34..358 | 240 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15463-PA | 389 | GD15463-PA | 1..389 | 1..389 | 2064 | 97.7 | Plus |
Dsim\GD22631-PA | 544 | GD22631-PA | 158..526 | 3..389 | 227 | 24.6 | Plus |
Dsim\GD22096-PA | 335 | GD22096-PA | 46..327 | 34..305 | 217 | 25.3 | Plus |
Dsim\GD14937-PA | 335 | GD14937-PA | 5..322 | 66..376 | 204 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20432-PA | 208 | GJ20432-PA | 1..207 | 171..377 | 928 | 80.2 | Plus |
Dvir\GJ18327-PA | 547 | GJ18327-PA | 187..529 | 27..389 | 233 | 24.5 | Plus |
Dvir\GJ12303-PA | 461 | GJ12303-PA | 130..458 | 64..384 | 209 | 26.9 | Plus |
Dvir\GJ11128-PA | 396 | GJ11128-PA | 53..352 | 43..336 | 198 | 24 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21937-PA | 378 | GK21937-PA | 1..378 | 8..389 | 1621 | 75.5 | Plus |
Dwil\GK15424-PA | 482 | GK15424-PA | 150..451 | 64..349 | 230 | 27 | Plus |
Dwil\GK15419-PA | 551 | GK15419-PA | 191..533 | 27..389 | 230 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14380-PA | 389 | GE14380-PA | 1..389 | 1..389 | 2043 | 96.4 | Plus |
Dyak\GE12044-PA | 407 | GE12044-PA | 50..384 | 34..356 | 266 | 26.1 | Plus |
Dyak\GE18978-PA | 549 | GE18978-PA | 188..531 | 25..389 | 224 | 24.7 | Plus |
Dyak\GE18982-PA | 469 | GE18982-PA | 116..440 | 38..351 | 216 | 26 | Plus |
Translation from 257 to 1426
> GH04269.hyp MDGFVVPNNSASLAFDNINLSYGRWDNQLLYRIKDFALLGEQYVDSSEGS LVCLATQTSVERLNSLPQVAANWQGKMSVALFAAGPEEFVVLQYFVTYMR LCFANIRENATFHLLTPRDFDKLPRVAALPLNMRGKFDCQYPDRTLKALL KFRSLKTLQWRQRNTYPQNHMRNLARKGCQTKYVFLTDIDIVPSTNSVPQ LNHFFRTANCTKSCAYVIPTFEIDVRATFPRSKNALVRLIRKGLARPFHE KVFIYNQYATNFSKWLSPNTNETEVSVSHVVTNFEFLYEPFYIAVDNAPA HDERFLGYGFTRNSQVYEMHIAGYQFYVLSPVFTGHWGLQRKQARPAWRE QQNNANRRKFDVFKSEIFVRYKNDPRLLLKAKKNQILVK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3253-PB | 389 | CG3253-PB | 1..389 | 1..389 | 2061 | 100 | Plus |
CG3253-PA | 389 | CG3253-PA | 1..389 | 1..389 | 2061 | 100 | Plus |
CG15483-PA | 407 | CG15483-PA | 50..363 | 34..336 | 254 | 25.9 | Plus |
CG11149-PE | 475 | CG11149-PE | 143..430 | 64..336 | 207 | 27.1 | Plus |
CG11149-PD | 475 | CG11149-PD | 143..430 | 64..336 | 207 | 27.1 | Plus |