BDGP Sequence Production Resources |
Search the DGRC for GH04281
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 42 |
Well: | 81 |
Vector: | pOT2 |
Associated Gene/Transcript | CycJ-RB |
Protein status: | GH04281.pep: gold |
Preliminary Size: | 1608 |
Sequenced Size: | 1503 |
Gene | Date | Evidence |
---|---|---|
CG10308 | 2001-01-01 | Release 2 assignment |
CG10308 | 2001-09-19 | Blastp of sequenced clone |
CG10308 | 2003-01-01 | Sim4 clustering to Release 3 |
CycJ | 2008-04-29 | Release 5.5 accounting |
CycJ | 2008-08-15 | Release 5.9 accounting |
CycJ | 2008-12-18 | 5.12 accounting |
1503 bp (1503 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058290
> GH04281.complete CGGAACCGTTGTAGCGCCATGTTTGCGCTCCTTTTGTTTTCTCCTTCATT TGTTTTGCTTTTTTCCGCCGTTAAGTTCTTGCCTTAAAATCGGTGATTTA AGGCATTGCATTCAATTTCGATACAATGGAGCAGAAAGTGGCTGCCGAGC AGAACATCTTCGTCGTCGACCGCAAATTGAAGAAAACTTGCCCGCAAGCA GATGTCGAGCGCCTGGCTAAGACGCACTGGCTCACCGACTATGCCCGGGA TATATTTTTGACCATGAGGGAGCAAGAACTCAGCCGTCGGCCTTTGTTTT ACCTTTCGCCGCAGCTGAACGAGCGCCGAAGAATGCTGCAGTTGCTCAAA CTGGCGACCAGCGCCCACAAGCTTAGTCGCTGTGCTTTGCACCTGGCCGT CTACTATATGGATCGCTTTGTTGATTACTACAAAATCCGTCCGGACAAAT TGCTCCTGGTGGCCATCACTTGTCTTCATATAGCTGCGCAGATCGAAAAC ACGGATGCGTTTATTCCGCGCTACAGCGAAATGAACCGATTGGTCAAGAA CGCCTATACGGCATTCGAGTACAAGGCTGTGGAAAGGAAGATCCTGTGCT TCCTGAACTTCGAGCTAATACGTCCCACCACCGCCAGTTTTGTGGAGCTC TTCGCCTGCAGTTTTCTCACTCGCTCCGATTTCAAGAACTACATCGAGAT GTTGGATGAGTACGAGCGGAACCATCACACCCAGCCGTACCAGCGATATA TAAGCTTCGAAGAGATGCTGTCCATTTTGGCGCAGTTGCTCCTTCGCATG GCGGATTATACATTGTACAATTTGCCAACGATCTGCCATCCCTTTTGGCT GCCGCCTGCATTGCTGCAGTTCGCCAGGTCAGCGGGGTCAGGCGCTGGTC GGAGTACCTAGTTGGACTGACCTCCTATACTGAGGCGAATGTCGAGCCGT ACATGAACGTTCTGACCGACTATTATTATTACCATGTTATTCAGACCGAC TACGGTAGTCCCTCTGTTCAGACCAACCAGAGTTTAGCCAGTCCCGATTC CGGATTCGAGGAGTCCTTCACTGAGAACACAAACCTGGTGGTCTCCGATG AAGTGGTCACAGTAGAGACCTACAACATAATTACCGTGCAGCTGCAGGAT CCATCTCCACATTCATCGACTTTCCTTCCCAAAGAGCAAACGAATTTGAA GCGATCGCGCTTTGAAGACGATACCGAAAACCAGCACCCATTGAAACACG CCAAAGTGGAGAGTGTAGCCAAAGATTAGTAAAAGGGAAAAACGAAACTA TTACCATTTGGAGGAAATCCAAATAGCTTAGAAGTGAAATGACATCCATA ACGTAGATATGGTCTTGTTCAATTGAGTTGAACCTCACCCATATAATAAT CGTGATGTTATGCTTTAATATATATGTATTTAATATATATTTGAAATTAT CTTATAAACTTATAAATACAATATGTCAAAAACTCAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3466859..3467524 | 820..1485 | 3240 | 99.1 | Plus |
chr3L | 24539361 | chr3L | 3466375..3466798 | 396..819 | 2075 | 99.3 | Plus |
chr3L | 24539361 | chr3L | 3465840..3466048 | 1..209 | 1045 | 100 | Plus |
chr3L | 24539361 | chr3L | 3466110..3466298 | 208..396 | 945 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 3467433..3468106 | 820..1493 | 3355 | 99.9 | Plus |
3L | 28110227 | 3L | 3466949..3467372 | 396..819 | 2120 | 100 | Plus |
3L | 28110227 | 3L | 3466414..3466622 | 1..209 | 1045 | 100 | Plus |
3L | 28110227 | 3L | 3466684..3466872 | 208..396 | 945 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 3467433..3468106 | 820..1493 | 3355 | 99.8 | Plus |
3L | 28103327 | 3L | 3466949..3467372 | 396..819 | 2120 | 100 | Plus |
3L | 28103327 | 3L | 3466414..3466622 | 1..209 | 1045 | 100 | Plus |
3L | 28103327 | 3L | 3466684..3466872 | 208..396 | 945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3465840..3466048 | 1..209 | 100 | -> | Plus |
chr3L | 3466112..3466298 | 210..396 | 100 | -> | Plus |
chr3L | 3466376..3466798 | 397..819 | 99 | -> | Plus |
chr3L | 3466859..3467452 | 820..1413 | 98 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycJ-RA | 1..1161 | 126..1279 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycJ-RA | 1..1161 | 126..1279 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycJ-RA | 1..1161 | 126..1279 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycJ-RA | 1..1161 | 126..1279 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycJ-RA | 1..1161 | 126..1279 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycJ-RB | 1..1485 | 1..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycJ-RB | 1..1485 | 1..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycJ-RB | 1..1471 | 15..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycJ-RB | 1..1485 | 1..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycJ-RB | 1..1471 | 15..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3466414..3466622 | 1..209 | 100 | -> | Plus |
3L | 3466686..3466872 | 210..396 | 100 | -> | Plus |
3L | 3466950..3467372 | 397..819 | 100 | -> | Plus |
3L | 3467433..3468098 | 820..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3466414..3466622 | 1..209 | 100 | -> | Plus |
3L | 3466686..3466872 | 210..396 | 100 | -> | Plus |
3L | 3466950..3467372 | 397..819 | 100 | -> | Plus |
3L | 3467433..3468098 | 820..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3466414..3466622 | 1..209 | 100 | -> | Plus |
3L | 3466686..3466872 | 210..396 | 100 | -> | Plus |
3L | 3466950..3467372 | 397..819 | 100 | -> | Plus |
3L | 3467433..3468098 | 820..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3466414..3466622 | 1..209 | 100 | -> | Plus |
arm_3L | 3466686..3466872 | 210..396 | 100 | -> | Plus |
arm_3L | 3466950..3467372 | 397..819 | 100 | -> | Plus |
arm_3L | 3467433..3468098 | 820..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3466414..3466622 | 1..209 | 100 | -> | Plus |
3L | 3466686..3466872 | 210..396 | 100 | -> | Plus |
3L | 3466950..3467372 | 397..819 | 100 | -> | Plus |
3L | 3467433..3468098 | 820..1485 | 100 | Plus |
Translation from 125 to 910
> GH04281.pep MEQKVAAEQNIFVVDRKLKKTCPQADVERLAKTHWLTDYARDIFLTMREQ ELSRRPLFYLSPQLNERRRMLQLLKLATSAHKLSRCALHLAVYYMDRFVD YYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAFEYK AVERKILCFLNFELIRPTTASFVELFACSFLTRSDFKNYIEMLDEYERNH HTQPYQRYISFEEMLSILAQLLLRMADYTLYNLPTICHPFWLPPALLQFA RSAGSGAGRST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24212-PA | 409 | GF24212-PA | 5..243 | 6..247 | 838 | 66.3 | Plus |
Dana\GF24509-PA | 466 | GF24509-PA | 180..341 | 17..178 | 147 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15144-PA | 264 | GG15144-PA | 1..261 | 1..261 | 1265 | 90.4 | Plus |
Dere\GG13881-PA | 491 | GG13881-PA | 185..346 | 17..178 | 157 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16117-PA | 378 | GH16117-PA | 23..242 | 26..247 | 573 | 50.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CycJ-PB | 261 | CG10308-PB | 1..261 | 1..261 | 1356 | 100 | Plus |
CycJ-PA | 386 | CG10308-PA | 1..231 | 1..231 | 1191 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12383-PA | 367 | GI12383-PA | 3..238 | 4..247 | 659 | 55.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13251-PA | 725 | GL13251-PA | 279..481 | 29..230 | 603 | 57.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28605-PA | 452 | GA28605-PA | 7..230 | 8..230 | 608 | 54 | Plus |
Dpse\GA28604-PA | 447 | GA28604-PA | 1..203 | 29..230 | 595 | 57.6 | Plus |
Dpse\GA27863-PA | 215 | GA27863-PA | 1..203 | 29..230 | 584 | 57.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14576-PA | 387 | GM14576-PA | 1..231 | 1..231 | 1155 | 94.4 | Plus |
Dsec\GM24703-PA | 490 | GM24703-PA | 183..344 | 17..178 | 152 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13768-PA | 159 | GD13768-PA | 1..150 | 1..150 | 738 | 93.3 | Plus |
Dsim\GD13769-PA | 194 | GD13769-PA | 1..40 | 192..231 | 192 | 92.5 | Plus |
Dsim\GD12771-PA | 490 | GD12771-PA | 183..344 | 17..178 | 151 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12272-PA | 370 | GJ12272-PA | 3..225 | 4..230 | 717 | 60.8 | Plus |
Dvir\GJ14140-PA | 238 | GJ14140-PA | 1..93 | 136..230 | 296 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20516-PA | 458 | GK20516-PA | 7..241 | 9..250 | 645 | 52.4 | Plus |
Translation from 125 to 910
> GH04281.hyp MEQKVAAEQNIFVVDRKLKKTCPQADVERLAKTHWLTDYARDIFLTMREQ ELSRRPLFYLSPQLNERRRMLQLLKLATSAHKLSRCALHLAVYYMDRFVD YYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAFEYK AVERKILCFLNFELIRPTTASFVELFACSFLTRSDFKNYIEMLDEYERNH HTQPYQRYISFEEMLSILAQLLLRMADYTLYNLPTICHPFWLPPALLQFA RSAGSGAGRST*