BDGP Sequence Production Resources |
Search the DGRC for GH04442
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 44 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6405-RA |
Protein status: | GH04442.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1354 |
Gene | Date | Evidence |
---|---|---|
CG6405 | 2001-01-01 | Release 2 assignment |
CG6405 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6405 | 2003-01-15 | Blastp of sequenced clone |
CG6405 | 2008-04-29 | Release 5.5 accounting |
CG6405 | 2008-08-15 | Release 5.9 accounting |
CG6405 | 2008-12-18 | 5.12 accounting |
1354 bp (1354 high quality bases) assembled on 2003-01-15
GenBank Submission: AY060619
> GH04442.complete GAAAACAAATATAAGGGACTAAAATAAAATAATAATGTTTCGTCGTGGAA AACTATCCTTTCTAAACACCAAAGATGACCGTGTTAAAATAATAAACGAG CGCATAAACATAACAGAAAGGCATCTAATGGAGATGTGCTCTTCGTTTGC TTTGGTAACGCGGAAAATGGCCAAATATCGGGACTCCTTTGATGAGTTGG CCAAGAGTGTGAAGAGCTACGCCGACGACGAGGAAATCAACGAGAGTCTC TGTCAGGGACTGAAGAGCTTCACCAACGCGGTTACCATAATGGGTGATTA CATGGACATCAATGTACACCGATTGGAACACAAGATTGTCAACGAGTTGG CGCAATTCGAGCAGCTTTGCAAGTCCACAAGGGACAATCTTCGACTGGCT GTCATAGCGCGGGATAAGGAGGTACTACGTCAGCGCCAGATGCTTGAGCT CAAGTCAAAGTTTTCTGCGAACAATAGTGCCGCCGATTCGGAGCTGTTTA AGGCCAAAATGGAGGTGCAGCGCACAAACAAGGAGATAGACGACATTATT GGCAACTTCGAGCAGCGGAAGTTGCGCGACTTAAAGCAGATAATCAGCGA TTTTATACTGATCGCCATGAAACAGCACACCAAGGCATTGGAGATACTCA GCGCAAGCTACTATGATATTGGAACCATTGATGAGCGCGACGATTTCATT GAGTTTCAGAAACTCATGAAGACCAAAGAAGAGCTGGCTTCCAGGAAAAC TGCACTCAAAAAGGGACTGCGCTCCCAGTCGATGGATAGCTTGGAGCACG AGCACCTGGTCAGTCCGCTCAAGAGGCGCCCGAAGTTGTCCAGGAGCAAT AGGAATCTGACGGGAGCCGGAATCAATCATGGAAGTAAAACAGAACCCGA AGATGAAACCGACGAGCAGGATGAAGAGGAAGATGATGAAGATGAGGAAA CCGAGCAAAGTGGCGAAGAGGACGAGGAATCTGGAACGGCAACGGATGAC GAGAGGGAACCCACGCAGCCGGGCAACCAGGTTCCTCCGCGGGAGAATGT TTTTGGGGCCAAGATCCGATCTGCCAGCAAGGATATAGCCACGCCATCGA CCAGTGCCAGTGCCACTTCTGCTCCTTCGAAGCCCAGCAGACAAACGGTC AAACATCCATTCAAGGCGGTGGCCTCCACCCATGTAAGGCTGCAGAAGCA GTTCCACGTGCCCCAGCACTAGCACTCAAATTATGACCAGTAGTAGAGTT CCTAGAGCTCACATCAGTATTGCAGGCACATTCTGGAATCGTAGCAAGAG CTTAAATAAAATTGAATTAGGAACATAAAAAAAAAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6405-RA | 1395 | CG6405-RA | 17..1343 | 1..1327 | 6635 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 12424156..12424627 | 476..947 | 2300 | 99.2 | Plus |
chr2L | 23010047 | chr2L | 12424682..12425063 | 945..1326 | 1910 | 100 | Plus |
chr2L | 23010047 | chr2L | 12423521..12423694 | 1..174 | 870 | 100 | Plus |
chr2L | 23010047 | chr2L | 12423746..12423905 | 175..334 | 785 | 99.4 | Plus |
chr2L | 23010047 | chr2L | 12423958..12424100 | 333..475 | 715 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12425539..12426010 | 476..947 | 2360 | 100 | Plus |
2L | 23513712 | 2L | 12426059..12426441 | 945..1327 | 1915 | 100 | Plus |
2L | 23513712 | 2L | 12424904..12425077 | 1..174 | 870 | 100 | Plus |
2L | 23513712 | 2L | 12425129..12425288 | 175..334 | 800 | 100 | Plus |
2L | 23513712 | 2L | 12425341..12425483 | 333..475 | 715 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12425539..12426010 | 476..947 | 2360 | 100 | Plus |
2L | 23513712 | 2L | 12426059..12426441 | 945..1327 | 1915 | 100 | Plus |
2L | 23513712 | 2L | 12424904..12425077 | 1..174 | 870 | 100 | Plus |
2L | 23513712 | 2L | 12425129..12425288 | 175..334 | 800 | 100 | Plus |
2L | 23513712 | 2L | 12425341..12425483 | 333..475 | 715 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 5235..5281 | 47..1 | 118 | 72.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 12423521..12423694 | 1..174 | 100 | -> | Plus |
chr2L | 12423746..12423905 | 175..334 | 99 | -> | Plus |
chr2L | 12423960..12424100 | 335..475 | 100 | -> | Plus |
chr2L | 12424156..12424626 | 476..946 | 99 | -> | Plus |
chr2L | 12424684..12425063 | 947..1326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6405-RA | 1..1188 | 35..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6405-RA | 1..1188 | 35..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6405-RA | 1..1188 | 35..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6405-RA | 1..1188 | 35..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6405-RA | 1..1188 | 35..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6405-RA | 1..1326 | 1..1326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6405-RA | 1..1326 | 1..1326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6405-RA | 1..1326 | 1..1326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6405-RA | 1..1326 | 1..1326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6405-RA | 1..1326 | 1..1326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12425343..12425483 | 335..475 | 100 | -> | Plus |
2L | 12424904..12425077 | 1..174 | 100 | -> | Plus |
2L | 12425129..12425288 | 175..334 | 100 | -> | Plus |
2L | 12425539..12426009 | 476..946 | 100 | -> | Plus |
2L | 12426061..12426440 | 947..1326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12425343..12425483 | 335..475 | 100 | -> | Plus |
2L | 12424904..12425077 | 1..174 | 100 | -> | Plus |
2L | 12425129..12425288 | 175..334 | 100 | -> | Plus |
2L | 12425539..12426009 | 476..946 | 100 | -> | Plus |
2L | 12426061..12426440 | 947..1326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12425343..12425483 | 335..475 | 100 | -> | Plus |
2L | 12424904..12425077 | 1..174 | 100 | -> | Plus |
2L | 12425129..12425288 | 175..334 | 100 | -> | Plus |
2L | 12425539..12426009 | 476..946 | 100 | -> | Plus |
2L | 12426061..12426440 | 947..1326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 12424904..12425077 | 1..174 | 100 | -> | Plus |
arm_2L | 12425129..12425288 | 175..334 | 100 | -> | Plus |
arm_2L | 12425343..12425483 | 335..475 | 100 | -> | Plus |
arm_2L | 12425539..12426009 | 476..946 | 100 | -> | Plus |
arm_2L | 12426061..12426440 | 947..1326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12425539..12426009 | 476..946 | 100 | -> | Plus |
2L | 12426061..12426440 | 947..1326 | 100 | Plus | |
2L | 12424904..12425077 | 1..174 | 100 | -> | Plus |
2L | 12425129..12425288 | 175..334 | 100 | -> | Plus |
2L | 12425343..12425483 | 335..475 | 100 | -> | Plus |
Translation from 34 to 1221
> GH04442.hyp MFRRGKLSFLNTKDDRVKIINERINITERHLMEMCSSFALVTRKMAKYRD SFDELAKSVKSYADDEEINESLCQGLKSFTNAVTIMGDYMDINVHRLEHK IVNELAQFEQLCKSTRDNLRLAVIARDKEVLRQRQMLELKSKFSANNSAA DSELFKAKMEVQRTNKEIDDIIGNFEQRKLRDLKQIISDFILIAMKQHTK ALEILSASYYDIGTIDERDDFIEFQKLMKTKEELASRKTALKKGLRSQSM DSLEHEHLVSPLKRRPKLSRSNRNLTGAGINHGSKTEPEDETDEQDEEED DEDEETEQSGEEDEESGTATDDEREPTQPGNQVPPRENVFGAKIRSASKD IATPSTSASATSAPSKPSRQTVKHPFKAVASTHVRLQKQFHVPQH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6405-PA | 395 | CG6405-PA | 1..395 | 1..395 | 1997 | 100 | Plus |
Translation from 34 to 1221
> GH04442.pep MFRRGKLSFLNTKDDRVKIINERINITERHLMEMCSSFALVTRKMAKYRD SFDELAKSVKSYADDEEINESLCQGLKSFTNAVTIMGDYMDINVHRLEHK IVNELAQFEQLCKSTRDNLRLAVIARDKEVLRQRQMLELKSKFSANNSAA DSELFKAKMEVQRTNKEIDDIIGNFEQRKLRDLKQIISDFILIAMKQHTK ALEILSASYYDIGTIDERDDFIEFQKLMKTKEELASRKTALKKGLRSQSM DSLEHEHLVSPLKRRPKLSRSNRNLTGAGINHGSKTEPEDETDEQDEEED DEDEETEQSGEEDEESGTATDDEREPTQPGNQVPPRENVFGAKIRSASKD IATPSTSASATSAPSKPSRQTVKHPFKAVASTHVRLQKQFHVPQH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14195-PA | 399 | GF14195-PA | 1..399 | 1..395 | 1617 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23783-PA | 351 | GG23783-PA | 1..351 | 45..395 | 1575 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11648-PA | 407 | GH11648-PA | 1..407 | 1..395 | 1445 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6405-PA | 395 | CG6405-PA | 1..395 | 1..395 | 1997 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17950-PA | 411 | GI17950-PA | 1..383 | 1..389 | 1341 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18626-PA | 396 | GL18626-PA | 1..396 | 1..395 | 1589 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19567-PA | 398 | GA19567-PA | 1..398 | 1..395 | 1562 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26816-PA | 353 | GM26816-PA | 1..299 | 45..343 | 1377 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23836-PA | 327 | GD23836-PA | 1..327 | 45..395 | 1575 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17721-PA | 418 | GJ17721-PA | 1..388 | 1..388 | 1372 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15496-PA | 413 | GK15496-PA | 1..412 | 1..394 | 1455 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18587-PA | 350 | GE18587-PA | 1..350 | 45..395 | 1587 | 92.9 | Plus |