BDGP Sequence Production Resources |
Search the DGRC for GH04548
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 45 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11060-RA |
Protein status: | GH04548.pep: gold |
Preliminary Size: | 2389 |
Sequenced Size: | 2258 |
Gene | Date | Evidence |
---|---|---|
CG11060 | 2001-01-01 | Release 2 assignment |
CG11060 | 2001-10-10 | Blastp of sequenced clone |
CG11060 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11060 | 2008-04-29 | Release 5.5 accounting |
CG11060 | 2008-08-15 | Release 5.9 accounting |
CG11060 | 2008-12-18 | 5.12 accounting |
2258 bp (2258 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060622
> GH04548.complete ATTAAACCGAGCGCATCGAATCCAAAAAACATCAAAAAATGAGGCCCACG CAGCACTCCGTCATAAACTCCTTGGGGAAAAAGATTTCGAATCAAACTAT CAACGATTCGCACTCCAACAAACATAACTTCATGGATATGGAACAAGAGG AAAAGCAGCCTGAGCATATGTACATGGCCACCCAGACCGTGGAGGACATT CTTAATGAGGTCCTGTGCATGCAGAATTTCCAGCAAAAGCAGTCGGACAG CAACCTAGATCAGTTCTGCCACTCGGAGAGGTCCAGGGATCGGAAGCCGG GCGACGATTTGGACATGGACCCGCGACTGCGCAGCTGGAACCGCGTGCTG CAGGAGCGTAGGCGACTGCAGGATAGGATCGCTCGGCAGACGGGTAAGCG GGCCGAGGACGTGCTCTTCAATCGCTCGGCGACCATCGACGAGGCCAACA AGCGGATGATTCTGCGCGTCCTTGACACCGCAGACAGGTCACGACCTCTT GCTCGCCTCAAGGACAATGTGACCTTGAACTCCCTGAAGCCGCGCTGTGA TCCCCATCTCTGCCGCGAGATTAAGGAGCTGTACGCCGCGAAGCCGCAGT TGCAGGAGGTGGAGTTCGTCGGCCTGCCGCAGGTCACCCAAAAGGAGCTG GCTGCCACCCGCCTTCATTCCAACGAGATCGAGAGCCAGTGGCAGCGCTC CCAGGTCTTGAGCGAACGACTTGAGGACAAGAAGCACTCTATTCGACAGG TGCTTGACTTTGCGCCCGATCTAAATGGGCTGCAGGTCACGCCGGCCTTT GTGGGCTCGTCCACTAAGAATCTGCCGATCATCAAAATCGACGAAACTTC CTTGTCTAATATCTCCGGGAACTCCACTCCGGAAGAGGAGGAGGATTCGG AGTCCGATCTGCTGTCCATAGAGGGGGAGGTAAGCGATAGCTTTCAAGAG GCGGCACTCGAGGATATTACAAAGGGAATTGTCGAGAGTCAGGACATGGA TGACGTCAAGGACGTACAAGGTCTGATGATCAACGGGGTGATCCTTGATT ACCGCAATCCTGTCGGCGCCATAAGCAAAAGCATCAATATGCTGCTGCAA TGTGAACCATATGAGCGCGTGGTGAAGATACTTTTGGACATTCAGAATCT AAGTCCGAAGCTGGTGCACGTCTATTGGCTTAGTAAGAACCGCTTGCGTT CCGACCGGCTGCCCTTGAACTCCGAGATGGTCTTCGACCGCAGCGAGTTC ATCCTGGAGCCACAGGGTCGCCGCCTCATTCGTGTGATGTTCCAGCCGAA AAAGGTGGGCCTTTTCACGCAGCGATGGCACGTGAACTTCCAAAAATCGC CCTTCTGTGGCACCCGCCGCCTGGACGTCGTTCTCCAGGGTCAGTGCACC ATGCCCGTTCCGTTCCAGAGACGCCTCGAGGGTCACCGACAGGTGCCCCT AGATAAGCAGCAACAATTGCAGGCCCAGGGCCTTCTGCAAATGCAGGCCA GTCTGGCTCCCATTATCGAGAACCCTCGACCATTGTGTCCCTACCAAAGA CATCTTGACGAGCGCGAGGTCTTTAATGCCCAGAACTTCTCTTACCGATG CCAGCGATACGAGGATCTGGAGGCTCTCAAGGACTTATATCAACTGGCCA AGAAGCCTCGCGATAGACCCTGGGATTTAAGTATCGAGACCCTGCGTCAC TTTATTGGCAAGCAGGAGAGTCGCTTCCTGCGCGAGAATCTCCACAACAA ACTGGTTGCTTTGCTCCAGCCGATGAAGTGCAACAGGTGCTCAGCTTATC CCTTAATGGAACACAATACGGAGCGGGATAGATCCCGCTTCATTTACGTG CGTGGCACTATCGCCAGCAAAATCGACGAGTGGGAGGCAATGGTTTTTGG GCTGGATGAACAGTTCTTTAAGCTGGAGCTCCTCCACTATCTAGGGGAGA ATTCTTCTCTTCCCGTCGCCTCAGAGCTAGGCCAGAAGAATCGCCAGCAG GGTCCAGATGAAAACGAAGAAATTCAGATCGTGGAGAAAGTCTCGAAGAG AGTCAAGGCAAGCAAGTACCTCAAGGACTCTCTCTATATGCACACCTACA GTCTGCTCTGTGATGCTGCCGAGGACATAGTCTCCGTCATCGAAAGCACC GCTGATTAGCATTCACAACACCCTTTCCCAGTTTTGGTCATATTTTTTTT AAGTGGCAACACCCAAATAAAATAAAAAAGCATTTATTATAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11060-RA | 2310 | CG11060-RA | 73..2310 | 1..2238 | 11190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3063351..3064495 | 1..1145 | 100 | -> | Plus |
chr2R | 3064589..3065683 | 1146..2240 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11060-RA | 1..2121 | 39..2159 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11060-RA | 1..2121 | 39..2159 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11060-RA | 1..2121 | 39..2159 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11060-RA | 1..2121 | 39..2159 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11060-RA | 1..2121 | 39..2159 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11060-RA | 73..2310 | 1..2238 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11060-RA | 73..2310 | 1..2238 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11060-RA | 73..2312 | 1..2240 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11060-RA | 73..2310 | 1..2238 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11060-RA | 73..2312 | 1..2240 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7175958..7177102 | 1..1145 | 100 | -> | Plus |
2R | 7177196..7178290 | 1146..2240 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7175958..7177102 | 1..1145 | 100 | -> | Plus |
2R | 7177196..7178290 | 1146..2240 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7175958..7177102 | 1..1145 | 100 | -> | Plus |
2R | 7177196..7178290 | 1146..2240 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3063463..3064607 | 1..1145 | 100 | -> | Plus |
arm_2R | 3064701..3065795 | 1146..2240 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7177157..7178301 | 1..1145 | 100 | -> | Plus |
2R | 7178395..7179489 | 1146..2240 | 100 | Plus |
Translation from 38 to 2158
> GH04548.pep MRPTQHSVINSLGKKISNQTINDSHSNKHNFMDMEQEEKQPEHMYMATQT VEDILNEVLCMQNFQQKQSDSNLDQFCHSERSRDRKPGDDLDMDPRLRSW NRVLQERRRLQDRIARQTGKRAEDVLFNRSATIDEANKRMILRVLDTADR SRPLARLKDNVTLNSLKPRCDPHLCREIKELYAAKPQLQEVEFVGLPQVT QKELAATRLHSNEIESQWQRSQVLSERLEDKKHSIRQVLDFAPDLNGLQV TPAFVGSSTKNLPIIKIDETSLSNISGNSTPEEEEDSESDLLSIEGEVSD SFQEAALEDITKGIVESQDMDDVKDVQGLMINGVILDYRNPVGAISKSIN MLLQCEPYERVVKILLDIQNLSPKLVHVYWLSKNRLRSDRLPLNSEMVFD RSEFILEPQGRRLIRVMFQPKKVGLFTQRWHVNFQKSPFCGTRRLDVVLQ GQCTMPVPFQRRLEGHRQVPLDKQQQLQAQGLLQMQASLAPIIENPRPLC PYQRHLDEREVFNAQNFSYRCQRYEDLEALKDLYQLAKKPRDRPWDLSIE TLRHFIGKQESRFLRENLHNKLVALLQPMKCNRCSAYPLMEHNTERDRSR FIYVRGTIASKIDEWEAMVFGLDEQFFKLELLHYLGENSSLPVASELGQK NRQQGPDENEEIQIVEKVSKRVKASKYLKDSLYMHTYSLLCDAAEDIVSV IESTAD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12240-PA | 738 | GF12240-PA | 8..736 | 11..705 | 1955 | 54 | Plus |
Dana\GF12241-PA | 760 | GF12241-PA | 75..755 | 34..704 | 770 | 29.6 | Plus |
Dana\GF12701-PA | 727 | GF12701-PA | 69..724 | 47..704 | 642 | 29.4 | Plus |
Dana\GF12700-PA | 535 | GF12700-PA | 181..531 | 313..706 | 285 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23264-PA | 704 | GG23264-PA | 1..704 | 1..706 | 3145 | 87.3 | Plus |
Dere\GG23265-PA | 747 | GG23265-PA | 82..742 | 51..704 | 781 | 31.8 | Plus |
Dere\GG23267-PA | 710 | GG23267-PA | 93..707 | 89..704 | 722 | 30.2 | Plus |
Dere\GG23266-PA | 542 | GG23266-PA | 204..540 | 328..705 | 380 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21520-PA | 736 | GH21520-PA | 77..733 | 14..704 | 1154 | 38.5 | Plus |
Dgri\GH21521-PA | 704 | GH21521-PA | 33..699 | 34..704 | 800 | 30.8 | Plus |
Dgri\GH21523-PA | 693 | GH21523-PA | 18..690 | 13..704 | 723 | 30.5 | Plus |
Dgri\GH21522-PA | 508 | GH21522-PA | 156..505 | 328..704 | 447 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11060-PA | 706 | CG11060-PA | 1..706 | 1..706 | 3649 | 100 | Plus |
CG33140-PA | 720 | CG33140-PA | 59..715 | 51..704 | 781 | 31.3 | Plus |
CG30384-PA | 708 | CG30384-PA | 66..705 | 49..704 | 762 | 29.7 | Plus |
CG30385-PA | 536 | CG30385-PA | 194..533 | 328..704 | 358 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19490-PA | 689 | GI19490-PA | 93..686 | 95..704 | 1112 | 40.6 | Plus |
Dmoj\GI19491-PA | 740 | GI19491-PA | 66..735 | 48..704 | 764 | 31.1 | Plus |
Dmoj\GI19493-PA | 672 | GI19493-PA | 54..669 | 51..704 | 727 | 29.5 | Plus |
Dmoj\GI19492-PA | 563 | GI19492-PA | 47..560 | 88..704 | 422 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26004-PA | 819 | GL26004-PA | 154..814 | 49..704 | 805 | 32.4 | Plus |
Dper\GL13788-PA | 696 | GL13788-PA | 52..693 | 47..704 | 704 | 29.6 | Plus |
Dper\GL24846-PA | 874 | GL24846-PA | 29..474 | 46..534 | 392 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25232-PA | 768 | GA25232-PA | 103..765 | 49..706 | 802 | 32.1 | Plus |
Dpse\GA26794-PA | 709 | GA26794-PA | 52..706 | 47..704 | 694 | 30 | Plus |
Dpse\GA23528-PA | 644 | GA23528-PA | 29..644 | 46..705 | 562 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20935-PA | 706 | GM20935-PA | 1..706 | 1..706 | 3677 | 97 | Plus |
Dsec\GM20939-PA | 708 | GM20939-PA | 61..707 | 47..706 | 757 | 29.7 | Plus |
Dsec\GM20937-PA | 539 | GM20937-PA | 172..534 | 360..704 | 472 | 32.7 | Plus |
Dsec\GM20938-PA | 536 | GM20938-PA | 194..534 | 328..705 | 364 | 28.6 | Plus |
Dsec\GM20936-PA | 195 | GM20936-PA | 59..194 | 51..193 | 188 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10461-PA | 706 | GD10461-PA | 1..706 | 1..706 | 3671 | 96.6 | Plus |
Dsim\GD10462-PA | 717 | GD10462-PA | 56..712 | 51..704 | 756 | 30.7 | Plus |
Dsim\GD10465-PA | 679 | GD10465-PA | 64..605 | 47..606 | 587 | 28.2 | Plus |
Dsim\GD10464-PA | 222 | GD10464-PA | 3..220 | 449..705 | 254 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15152-PA | 738 | GJ15152-PA | 74..737 | 8..706 | 1178 | 38.2 | Plus |
Dvir\GJ15153-PA | 713 | GJ15153-PA | 62..708 | 51..704 | 815 | 31.9 | Plus |
Dvir\GJ15156-PA | 707 | GJ15156-PA | 85..704 | 89..704 | 730 | 30.5 | Plus |
Dvir\GJ15155-PA | 597 | GJ15155-PA | 33..594 | 75..704 | 480 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21792-PA | 693 | GK21792-PA | 65..691 | 67..705 | 1196 | 41.7 | Plus |
Dwil\GK19405-PA | 713 | GK19405-PA | 93..710 | 93..704 | 877 | 34 | Plus |
Dwil\GK21794-PA | 718 | GK21794-PA | 38..713 | 40..704 | 809 | 33 | Plus |
Dwil\GK19404-PA | 598 | GK19404-PA | 41..595 | 87..704 | 540 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19112-PA | 706 | GE19112-PA | 1..706 | 1..706 | 3233 | 89.2 | Plus |
Dyak\GE19113-PA | 748 | GE19113-PA | 82..743 | 51..704 | 761 | 31.1 | Plus |
Dyak\GE19115-PA | 707 | GE19115-PA | 59..704 | 47..704 | 738 | 30.2 | Plus |
Dyak\GE19114-PA | 542 | GE19114-PA | 165..540 | 292..705 | 387 | 28.1 | Plus |
Translation from 38 to 2158
> GH04548.hyp MRPTQHSVINSLGKKISNQTINDSHSNKHNFMDMEQEEKQPEHMYMATQT VEDILNEVLCMQNFQQKQSDSNLDQFCHSERSRDRKPGDDLDMDPRLRSW NRVLQERRRLQDRIARQTGKRAEDVLFNRSATIDEANKRMILRVLDTADR SRPLARLKDNVTLNSLKPRCDPHLCREIKELYAAKPQLQEVEFVGLPQVT QKELAATRLHSNEIESQWQRSQVLSERLEDKKHSIRQVLDFAPDLNGLQV TPAFVGSSTKNLPIIKIDETSLSNISGNSTPEEEEDSESDLLSIEGEVSD SFQEAALEDITKGIVESQDMDDVKDVQGLMINGVILDYRNPVGAISKSIN MLLQCEPYERVVKILLDIQNLSPKLVHVYWLSKNRLRSDRLPLNSEMVFD RSEFILEPQGRRLIRVMFQPKKVGLFTQRWHVNFQKSPFCGTRRLDVVLQ GQCTMPVPFQRRLEGHRQVPLDKQQQLQAQGLLQMQASLAPIIENPRPLC PYQRHLDEREVFNAQNFSYRCQRYEDLEALKDLYQLAKKPRDRPWDLSIE TLRHFIGKQESRFLRENLHNKLVALLQPMKCNRCSAYPLMEHNTERDRSR FIYVRGTIASKIDEWEAMVFGLDEQFFKLELLHYLGENSSLPVASELGQK NRQQGPDENEEIQIVEKVSKRVKASKYLKDSLYMHTYSLLCDAAEDIVSV IESTAD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11060-PA | 706 | CG11060-PA | 1..706 | 1..706 | 3649 | 100 | Plus |
CG33140-PA | 720 | CG33140-PA | 59..715 | 51..704 | 781 | 31.3 | Plus |
CG30384-PA | 708 | CG30384-PA | 66..705 | 49..704 | 762 | 29.7 | Plus |
CG30385-PA | 536 | CG30385-PA | 194..533 | 328..704 | 358 | 28.4 | Plus |