BDGP Sequence Production Resources |
Search the DGRC for GH04560
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 45 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | CG18815-RA |
Protein status: | GH04560.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1238 |
Gene | Date | Evidence |
---|---|---|
CG18815 | 2001-01-01 | Release 2 assignment |
CG18815 | 2002-03-19 | Blastp of sequenced clone |
CG18815 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18815 | 2008-04-29 | Release 5.5 accounting |
CG18815 | 2008-08-15 | Release 5.9 accounting |
CG18815 | 2008-12-18 | 5.12 accounting |
1238 bp (1238 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094672
> GH04560.complete AACGCAGCTGCATGAATTGTCGTAGTTGAGCGAATTTAAACAAATTAACA CAATACTTGTGGTATTACCTGAAATCCGCTGACACCGAAAAAAGCGACGA AAGCAGCGCCAAGTCGCCGAATCGCAGAGTACCTGGAATAGGAATAGTGC GTCCCCAGTAGAGGCTAAACTGAACAGCAGACATGGCTGCGCCGGTCATT GTCGAGGCCACGGTCAAGCAAACCGCCACGCTGATCTTCATGCACGGCCT GGGTGATACGGGTCATGGCTGGAGCAGTGCCCTAGCCGCCATCCGCCCAC CTTTCATGAAAGTCATCTGCCCCACGGCGCCCACACAGCCCGTTTCGCTG AACGCCGGCTTCCGCATGCCGTCGTGGTTTGACCTGAAGACGCTGGACAT CGGTGGGCCCGAGGACGAGCCGGGCATCCAGTCGGCGCGTGATAGTGTGC ACGGTATGATCCAGAAGGAGATTAGCGCTGGGATTCCGGCCAATCGCATT GTCCTGGGCGGATTCTCGCAGGGCGGAGCCTTGGCACTGTACTCGGCACT CACGTACGATCAGCCGCTGGCCGGCGTGGTGGCCCTATCCTGTTGGCTGC CGCTGCACAAGCAGTTCCCAGGCGCCAAGGTGAACAGCGATGATGTGCCG ATTTTCCAGGCGCATGGCGACTACGATCCCGTGGTGCCGTACAAATTCGG CCAGCTGAGCGCCAGCCTGCTCAAGTCGTTCATGAAGAATGTGACGTTCA AGACGTACAGTGGACTATCGCACTCGTCGTCCGACGACGAAATGGATGAC GTCAAGGACATCATCAGTAAATGGGTAAACTAACTTCCACTGAACCATAG CACTCTTAGAACGTACGAAAGCCCCCGACCCAGCCCGTTGCATTCCAACT ATTCACGCAATATGGAGCGCAGTAAGAGAGTCACACTGAGAGTTATACGA GTAGGCTCTCTCGTAGCCCAATTATGGAAATTATCACTGAAAAATCAATT CGAAAAGCAATCAATTATTATACACACACGGTAGCTATACCTAATTAAAT GCCAAAATACAAGCAATTTGCGAGGGAAATTCTCCAGCGCGAGACGTTTC AGAGTATAGAAGCAACTGACTTTGATATTTCTTCGCTGCTAATTATTTCG GTTTACTTATTTGGGACTTGTTCGTATTTAAATTGAAATTAATAAAGTTA TATAATCAAAGAACAACTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18815-RA | 1437 | CG18815-RA | 64..1287 | 1..1224 | 6105 | 99.9 | Plus |
CG18815-RB | 1261 | CG18815-RB | 106..1260 | 70..1224 | 5760 | 99.9 | Plus |
CG18815-RC | 1260 | CG18815-RC | 107..1259 | 72..1224 | 5750 | 99.9 | Plus |
CG18815-RB | 1261 | CG18815-RB | 47..107 | 1..61 | 305 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11619871..11620416 | 262..807 | 2685 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 11620490..11620903 | 805..1218 | 2070 | 100 | Plus |
chr3L | 24539361 | chr3L | 11619249..11619412 | 71..234 | 805 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 11618973..11619043 | 1..71 | 355 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11628960..11629505 | 262..807 | 2730 | 100 | Plus |
3L | 28110227 | 3L | 11629579..11629998 | 805..1224 | 2085 | 99.8 | Plus |
3L | 28110227 | 3L | 11628342..11628505 | 71..234 | 805 | 99.4 | Plus |
3L | 28110227 | 3L | 11628066..11628136 | 1..71 | 355 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11622060..11622605 | 262..807 | 2730 | 100 | Plus |
3L | 28103327 | 3L | 11622679..11623098 | 805..1224 | 2085 | 99.7 | Plus |
3L | 28103327 | 3L | 11621442..11621605 | 71..234 | 805 | 99.3 | Plus |
3L | 28103327 | 3L | 11621166..11621236 | 1..71 | 355 | 100 | Plus |
3L | 28103327 | 3L | 11621662..11621694 | 230..262 | 165 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker | 7256 | Stalker STALKER 7256bp | 6704..6823 | 943..1061 | 120 | 57.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11618973..11619043 | 1..71 | 100 | -> | Plus |
chr3L | 11619250..11619408 | 72..230 | 100 | -> | Plus |
chr3L | 11619470..11619501 | 231..262 | 96 | -> | Plus |
chr3L | 11619872..11620415 | 263..806 | 99 | -> | Plus |
chr3L | 11620492..11620903 | 807..1218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18815-RC | 1..651 | 183..833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18815-RC | 1..651 | 183..833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18815-RA | 1..651 | 183..833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18815-RC | 1..651 | 183..833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18815-RA | 1..651 | 183..833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18815-RA | 1..1214 | 5..1218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18815-RA | 1..1214 | 5..1218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18815-RA | 30..1247 | 1..1218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18815-RA | 1..1214 | 5..1218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18815-RA | 30..1247 | 1..1218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11628066..11628136 | 1..71 | 100 | -> | Plus |
3L | 11628343..11628501 | 72..230 | 100 | -> | Plus |
3L | 11628563..11628594 | 231..262 | 100 | -> | Plus |
3L | 11628961..11629504 | 263..806 | 100 | -> | Plus |
3L | 11629581..11629992 | 807..1218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11628066..11628136 | 1..71 | 100 | -> | Plus |
3L | 11628343..11628501 | 72..230 | 100 | -> | Plus |
3L | 11628563..11628594 | 231..262 | 100 | -> | Plus |
3L | 11628961..11629504 | 263..806 | 100 | -> | Plus |
3L | 11629581..11629992 | 807..1218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11628066..11628136 | 1..71 | 100 | -> | Plus |
3L | 11628343..11628501 | 72..230 | 100 | -> | Plus |
3L | 11628563..11628594 | 231..262 | 100 | -> | Plus |
3L | 11628961..11629504 | 263..806 | 100 | -> | Plus |
3L | 11629581..11629992 | 807..1218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11621166..11621236 | 1..71 | 100 | -> | Plus |
arm_3L | 11621443..11621601 | 72..230 | 100 | -> | Plus |
arm_3L | 11621663..11621694 | 231..262 | 100 | -> | Plus |
arm_3L | 11622061..11622604 | 263..806 | 100 | -> | Plus |
arm_3L | 11622681..11623092 | 807..1218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11622061..11622604 | 263..806 | 100 | -> | Plus |
3L | 11622681..11623092 | 807..1218 | 100 | Plus | |
3L | 11621166..11621236 | 1..71 | 100 | -> | Plus |
3L | 11621443..11621601 | 72..230 | 100 | -> | Plus |
3L | 11621663..11621694 | 231..262 | 100 | -> | Plus |
Translation from 182 to 832
> GH04560.hyp MAAPVIVEATVKQTATLIFMHGLGDTGHGWSSALAAIRPPFMKVICPTAP TQPVSLNAGFRMPSWFDLKTLDIGGPEDEPGIQSARDSVHGMIQKEISAG IPANRIVLGGFSQGGALALYSALTYDQPLAGVVALSCWLPLHKQFPGAKV NSDDVPIFQAHGDYDPVVPYKFGQLSASLLKSFMKNVTFKTYSGLSHSSS DDEMDDVKDIISKWVN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18815-PC | 216 | CG18815-PC | 1..216 | 1..216 | 1134 | 100 | Plus |
CG18815-PB | 216 | CG18815-PB | 1..216 | 1..216 | 1134 | 100 | Plus |
CG18815-PA | 216 | CG18815-PA | 1..216 | 1..216 | 1134 | 100 | Plus |
CG18815-PD | 221 | CG18815-PD | 1..214 | 1..214 | 1124 | 100 | Plus |
CG18815-PE | 232 | CG18815-PE | 1..214 | 1..214 | 1124 | 100 | Plus |
Translation from 182 to 832
> GH04560.pep MAAPVIVEATVKQTATLIFMHGLGDTGHGWSSALAAIRPPFMKVICPTAP TQPVSLNAGFRMPSWFDLKTLDIGGPEDEPGIQSARDSVHGMIQKEISAG IPANRIVLGGFSQGGALALYSALTYDQPLAGVVALSCWLPLHKQFPGAKV NSDDVPIFQAHGDYDPVVPYKFGQLSASLLKSFMKNVTFKTYSGLSHSSS DDEMDDVKDIISKWVN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25278-PA | 216 | GF25278-PA | 1..216 | 1..216 | 1128 | 98.1 | Plus |
Dana\GF17085-PA | 235 | GF17085-PA | 8..220 | 7..215 | 281 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15517-PA | 216 | GG15517-PA | 1..216 | 1..216 | 1132 | 98.6 | Plus |
Dere\GG17261-PA | 235 | GG17261-PA | 4..220 | 3..211 | 268 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14861-PA | 216 | GH14861-PA | 1..216 | 1..216 | 1083 | 93.1 | Plus |
Dgri\GH19562-PA | 232 | GH19562-PA | 8..218 | 12..212 | 247 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18815-PC | 216 | CG18815-PC | 1..216 | 1..216 | 1134 | 100 | Plus |
CG18815-PB | 216 | CG18815-PB | 1..216 | 1..216 | 1134 | 100 | Plus |
CG18815-PA | 216 | CG18815-PA | 1..216 | 1..216 | 1134 | 100 | Plus |
CG18815-PD | 221 | CG18815-PD | 1..214 | 1..214 | 1124 | 100 | Plus |
CG18815-PE | 232 | CG18815-PE | 1..214 | 1..214 | 1124 | 100 | Plus |
CG6567-PB | 235 | CG6567-PB | 8..220 | 7..211 | 267 | 34.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13712-PA | 216 | GI13712-PA | 1..216 | 1..216 | 1092 | 94 | Plus |
Dmoj\GI15223-PA | 216 | GI15223-PA | 3..211 | 9..211 | 270 | 32.1 | Plus |
Dmoj\GI23857-PA | 232 | GI23857-PA | 8..219 | 12..213 | 257 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16272-PA | 216 | GL16272-PA | 1..216 | 1..216 | 1113 | 96.3 | Plus |
Dper\GL21926-PA | 214 | GL21926-PA | 4..199 | 3..190 | 273 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15093-PA | 216 | GA15093-PA | 1..216 | 1..216 | 1113 | 96.3 | Plus |
Dpse\GA19689-PA | 235 | GA19689-PA | 4..220 | 3..211 | 282 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25286-PA | 216 | GM25286-PA | 1..216 | 1..216 | 1139 | 99.5 | Plus |
Dsec\GM26145-PA | 235 | GM26145-PA | 4..222 | 3..213 | 263 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14317-PA | 216 | GD14317-PA | 1..216 | 1..216 | 1139 | 99.5 | Plus |
Dsim\GD20698-PA | 235 | GD20698-PA | 4..222 | 3..213 | 268 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14054-PA | 216 | GJ14054-PA | 1..216 | 1..216 | 1091 | 93.1 | Plus |
Dvir\GJ10571-PA | 232 | GJ10571-PA | 8..219 | 12..213 | 273 | 33 | Plus |
Dvir\GJ17261-PA | 217 | GJ17261-PA | 7..214 | 12..213 | 254 | 32.7 | Plus |