BDGP Sequence Production Resources |
Search the DGRC for GH04653
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 46 |
Well: | 53 |
Vector: | pOT2 |
Associated Gene/Transcript | king-tubby-RA |
Protein status: | GH04653.pep: wuzgold |
Preliminary Size: | 1867 |
Sequenced Size: | 1878 |
Gene | Date | Evidence |
---|---|---|
CG9398 | 2001-01-01 | Release 2 assignment |
CG9398 | 2001-10-10 | Blastp of sequenced clone |
CG9398 | 2003-01-01 | Sim4 clustering to Release 3 |
king-tubby | 2008-04-29 | Release 5.5 accounting |
king-tubby | 2008-08-15 | Release 5.9 accounting |
king-tubby | 2008-12-18 | 5.12 accounting |
1878 bp (1878 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060625
> GH04653.complete TCAGTGCACTTGAAATCGCAATTATTTGATTTATTATCTTATTACCTTAG GTGCGCCAGCTGATGGAGGCCTACATCCGGCAGAAGAGAGCCTCGCCGGG AATGGTCCAGGCCAGCGATTTGCAGATCAATCGACCCATGTCCGGGATGC GCAGCAACAGCCGGGAGCTGCACGCCTACGACGGACCCATGCAGTTCATC AGTTCGCCCCAAAATCCGGACCAGATACTCACCAACGGCAGTCCCGGCGG CATCAATCCGGTTGCCATGAACACGAGTCGCAATCACTCGAATAACATGC GCAGCCTAAGCACCATCAACCAGGAGGCTGATCTCATAGAGGAGATCTCA TCGCACGAGTTGGAGGACGAGGAGAGCAGTCCGGTGACGGTGATTGAGCA GCACCAGCAGTCAGCCTCGCACAGCGCCAACTCGACGCAATCGCAGAAAC CACGTGCCCGCCAGCATTCCTTTAGCGACAATCTGGACGAGGATGACTAC ACCAATCGCAATGTGGCCGGTGCTGCTCCAGTGCGTCCCGCCGGCATGGC CTCATCGCCGTACAAGGACGCAACGCTGGACGGCAGCAGCAACGGGACGG GGAACGGAACTGGCGGCGAGTCCGAGGGAGATGTCATCGGCAATATCGAC CAGTTCGTGATGCAACCAGCGCCACAGGGAGTGCTCTACAAGTGCCGCAT TACGCGGGACAGGAAGGGCATGGACCGCGGCCTCTTTCCCATCTACTACT TGCATCTGGAACGTGACTACGGCAAGAAGATATTTCTGCTGGGAGGTCGC AAACGCAAGAAGAGCAAGACATCCAACTACATTGTCAGCTGCGATCCCAC GGATTTGTCTCGCAATGCCGATGGCTTCTGTGGCAAACTGCGCTCTAATG TCTTTGGCACATCCTTCACGGTCTTTGACAACGGCAACAAGGAGAGCACA GAGAGTCCTCGACTCGACTTGGCCGTCATCATTTATGACACCAACATTTT GGGATTCAAGGGGCCACGCAACATGACTGTTATACTGCCCGGCATGACTG AGGACGATCAGCGTGTCAAGATCAGTTCGGCGGATCCCAAACAGCAGGGC ATCCTTGACCTATGGAAAATGAAGAACATGGACAACATCGTGGAGCTGCA CAATAAGACGCCAGTGTGGAACGATGAAACCCAATCGTATGTGCTCAACT TTCATGGGCGCGTCACCCAGGCGTCGGTGAAGAACTTTCAGTTGGTCCAC GACTCCGATCCGGAGTACATAGTAATGCAGTTCGGCCGCACCTCGGAGGA CGTCTTCACCATGGACTATCGCTATCCCCTGTGCGCCATGCAGGCATTCG CCATTGCCCTCAGTAGTTTCGATGGCAAAATAGCCTGCGAGTGAGCTGGC TGGGATCCTCGGGTTGGCCCGTTGCCTTATGTACAGCTGATTATCTGGAG TGCGGATCAAGTCGCTCCGGGCGGATCATTGTTGAAATTATTATCGGAAA TCTAGTCACTCGAAGTCGGGTTTTGGTAGACCATCGTTGAAATGAGTAAT GTAGTTAGTAGCTACTCGTATCGCGTATCATTGTATAACGTATATTCAGA ATGTGCTCACCGATTTTATAAGAAATTATTTAGGACAGGTCCTACAACTT TGTAAATCTAAATGTGCCCCTTTTAGCGATAAGTTCACTTGTAAGCGATT CGAAGTCAAGGTCATTTAAAGTAATATCAGTTTTATAATCAGCATATAGC AACAAATCAAGGACTAATGTAAACTATTTAAAATGCCACTACTATTAGTC GGTAAGAGAGCACTACTAACTTGTACTAAGCTCTAAATAAATACAAACAG CTATTGATCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17009413..17010147 | 1123..1859 | 3530 | 98.9 | Plus |
chr2R | 21145070 | chr2R | 17008445..17008915 | 327..797 | 2310 | 99.4 | Plus |
chr2R | 21145070 | chr2R | 17008074..17008348 | 53..327 | 1360 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 17008969..17009162 | 794..987 | 910 | 97.9 | Plus |
chr2R | 21145070 | chr2R | 17009219..17009356 | 987..1124 | 675 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 17007943..17007994 | 2..53 | 260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21122968..21123710 | 1123..1865 | 3715 | 100 | Plus |
2R | 25286936 | 2R | 21122000..21122470 | 327..797 | 2355 | 100 | Plus |
2R | 25286936 | 2R | 21121629..21121903 | 53..327 | 1375 | 100 | Plus |
2R | 25286936 | 2R | 21122524..21122717 | 794..987 | 970 | 100 | Plus |
2R | 25286936 | 2R | 21122774..21122911 | 987..1124 | 690 | 100 | Plus |
2R | 25286936 | 2R | 21121497..21121549 | 1..53 | 265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21124167..21124909 | 1123..1865 | 3715 | 100 | Plus |
2R | 25260384 | 2R | 21123199..21123669 | 327..797 | 2355 | 100 | Plus |
2R | 25260384 | 2R | 21122828..21123102 | 53..327 | 1375 | 100 | Plus |
2R | 25260384 | 2R | 21123723..21123916 | 794..987 | 970 | 100 | Plus |
2R | 25260384 | 2R | 21123973..21124110 | 987..1124 | 690 | 100 | Plus |
2R | 25260384 | 2R | 21122696..21122748 | 1..53 | 265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17007942..17007994 | 1..53 | 98 | -> | Plus |
chr2R | 17008075..17008348 | 54..327 | 99 | -> | Plus |
chr2R | 17008446..17008913 | 328..795 | 99 | -> | Plus |
chr2R | 17008971..17009161 | 796..986 | 97 | -> | Plus |
chr2R | 17009219..17009356 | 987..1124 | 99 | -> | Plus |
chr2R | 17009415..17010147 | 1125..1859 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
king-tubby-RB | 38..1383 | 49..1394 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
king-tubby-RB | 38..1383 | 49..1394 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ktub-RB | 38..1383 | 49..1394 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
king-tubby-RB | 38..1383 | 49..1394 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ktub-RB | 38..1383 | 49..1394 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
king-tubby-RA | 1..1859 | 1..1859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
king-tubby-RA | 1..1859 | 1..1859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ktub-RB | 686..2496 | 49..1859 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
king-tubby-RA | 1..1859 | 1..1859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ktub-RB | 686..2496 | 49..1859 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21122774..21122911 | 987..1124 | 100 | -> | Plus |
2R | 21121497..21121549 | 1..53 | 100 | -> | Plus |
2R | 21121630..21121903 | 54..327 | 100 | -> | Plus |
2R | 21122001..21122468 | 328..795 | 100 | -> | Plus |
2R | 21122526..21122716 | 796..986 | 100 | -> | Plus |
2R | 21122970..21123704 | 1125..1859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21122774..21122911 | 987..1124 | 100 | -> | Plus |
2R | 21121497..21121549 | 1..53 | 100 | -> | Plus |
2R | 21121630..21121903 | 54..327 | 100 | -> | Plus |
2R | 21122001..21122468 | 328..795 | 100 | -> | Plus |
2R | 21122526..21122716 | 796..986 | 100 | -> | Plus |
2R | 21122970..21123704 | 1125..1859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21122774..21122911 | 987..1124 | 100 | -> | Plus |
2R | 21121497..21121549 | 1..53 | 100 | -> | Plus |
2R | 21121630..21121903 | 54..327 | 100 | -> | Plus |
2R | 21122001..21122468 | 328..795 | 100 | -> | Plus |
2R | 21122526..21122716 | 796..986 | 100 | -> | Plus |
2R | 21122970..21123704 | 1125..1859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17009002..17009054 | 1..53 | 100 | -> | Plus |
arm_2R | 17009135..17009408 | 54..327 | 100 | -> | Plus |
arm_2R | 17009506..17009973 | 328..795 | 100 | -> | Plus |
arm_2R | 17010031..17010221 | 796..986 | 100 | -> | Plus |
arm_2R | 17010279..17010416 | 987..1124 | 100 | -> | Plus |
arm_2R | 17010475..17011209 | 1125..1859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21122829..21123102 | 54..327 | 100 | -> | Plus |
2R | 21123200..21123667 | 328..795 | 100 | -> | Plus |
2R | 21123725..21123915 | 796..986 | 100 | -> | Plus |
2R | 21123973..21124110 | 987..1124 | 100 | -> | Plus |
2R | 21124169..21124903 | 1125..1859 | 100 | Plus | |
2R | 21122696..21122748 | 1..53 | 100 | -> | Plus |
Translation from 62 to 1393
> GH04653.hyp MEAYIRQKRASPGMVQASDLQINRPMSGMRSNSRELHAYDGPMQFISSPQ NPDQILTNGSPGGINPVAMNTSRNHSNNMRSLSTINQEADLIEEISSHEL EDEESSPVTVIEQHQQSASHSANSTQSQKPRARQHSFSDNLDEDDYTNRN VAGAAPVRPAGMASSPYKDATLDGSSNGTGNGTGGESEGDVIGNIDQFVM QPAPQGVLYKCRITRDRKGMDRGLFPIYYLHLERDYGKKIFLLGGRKRKK SKTSNYIVSCDPTDLSRNADGFCGKLRSNVFGTSFTVFDNGNKESTESPR LDLAVIIYDTNILGFKGPRNMTVILPGMTEDDQRVKISSADPKQQGILDL WKMKNMDNIVELHNKTPVWNDETQSYVLNFHGRVTQASVKNFQLVHDSDP EYIVMQFGRTSEDVFTMDYRYPLCAMQAFAIALSSFDGKIACE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ktub-PB | 460 | CG9398-PB | 18..460 | 1..443 | 2319 | 100 | Plus |
ktub-PC | 469 | CG9398-PC | 18..469 | 1..443 | 2299 | 98 | Plus |
Tusp-PG | 1430 | CG5586-PG | 1354..1424 | 362..435 | 195 | 50 | Plus |
Tusp-PE | 1432 | CG5586-PE | 1356..1426 | 362..435 | 195 | 50 | Plus |
Tusp-PD | 1432 | CG5586-PD | 1356..1426 | 362..435 | 195 | 50 | Plus |
Translation from 62 to 1393
> GH04653.pep MEAYIRQKRASPGMVQASDLQINRPMSGMRSNSRELHAYDGPMQFISSPQ NPDQILTNGSPGGINPVAMNTSRNHSNNMRSLSTINQEADLIEEISSHEL EDEESSPVTVIEQHQQSASHSANSTQSQKPRARQHSFSDNLDEDDYTNRN VAGAAPVRPAGMASSPYKDATLDGSSNGTGNGTGGESEGDVIGNIDQFVM QPAPQGVLYKCRITRDRKGMDRGLFPIYYLHLERDYGKKIFLLGGRKRKK SKTSNYIVSCDPTDLSRNADGFCGKLRSNVFGTSFTVFDNGNKESTESPR LDLAVIIYDTNILGFKGPRNMTVILPGMTEDDQRVKISSADPKQQGILDL WKMKNMDNIVELHNKTPVWNDETQSYVLNFHGRVTQASVKNFQLVHDSDP EYIVMQFGRTSEDVFTMDYRYPLCAMQAFAIALSSFDGKIACE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11934-PA | 449 | GF11934-PA | 9..449 | 1..443 | 2311 | 96.6 | Plus |
Dana\GF16293-PA | 1419 | GF16293-PA | 1343..1418 | 362..440 | 206 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22088-PA | 448 | GG22088-PA | 6..448 | 1..443 | 2387 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20719-PA | 447 | GH20719-PA | 8..447 | 1..443 | 1931 | 85.7 | Plus |
Dgri\GH19263-PA | 1442 | GH19263-PA | 1366..1441 | 362..440 | 206 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ktub-PB | 460 | CG9398-PB | 18..460 | 1..443 | 2319 | 100 | Plus |
ktub-PC | 469 | CG9398-PC | 18..469 | 1..443 | 2299 | 98 | Plus |
Tusp-PG | 1430 | CG5586-PG | 1354..1424 | 362..435 | 195 | 50 | Plus |
Tusp-PE | 1432 | CG5586-PE | 1356..1426 | 362..435 | 195 | 50 | Plus |
Tusp-PD | 1432 | CG5586-PD | 1356..1426 | 362..435 | 195 | 50 | Plus |
Tusp-PF | 1433 | CG5586-PF | 1357..1427 | 362..435 | 195 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20804-PA | 453 | GI20804-PA | 9..453 | 1..443 | 1941 | 86.2 | Plus |
Dmoj\GI22014-PA | 1479 | GI22014-PA | 1403..1478 | 362..440 | 205 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10151-PA | 459 | GL10151-PA | 18..459 | 1..443 | 2184 | 91.9 | Plus |
Dper\GL13703-PA | 1446 | GL13703-PA | 1370..1445 | 362..440 | 205 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21760-PB | 456 | GA21760-PB | 15..456 | 1..443 | 2178 | 91.9 | Plus |
Dpse\GA18988-PA | 1470 | GA18988-PA | 1394..1469 | 362..440 | 205 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15805-PA | 443 | GM15805-PA | 1..443 | 1..443 | 2384 | 99.5 | Plus |
Dsec\GM16345-PA | 1401 | GM16345-PA | 1325..1400 | 362..440 | 206 | 46.8 | Plus |
Dsec\GM23252-PA | 77 | GM23252-PA | 1..71 | 362..435 | 200 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11564-PA | 443 | GD11564-PA | 1..443 | 1..443 | 2398 | 100 | Plus |
Dsim\GD21342-PA | 1157 | GD21342-PA | 1081..1156 | 362..440 | 207 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20537-PA | 455 | GJ20537-PA | 12..455 | 1..443 | 1929 | 85.7 | Plus |
Dvir\GJ10464-PA | 1458 | GJ10464-PA | 1382..1457 | 362..440 | 205 | 46.8 | Plus |