BDGP Sequence Production Resources |
Search the DGRC for GH04680
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 46 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5150-RA |
Protein status: | GH04680.pep: gold |
Preliminary Size: | 1858 |
Sequenced Size: | 1792 |
Gene | Date | Evidence |
---|---|---|
CG5150 | 2001-01-01 | Release 2 assignment |
CG5150 | 2001-10-10 | Blastp of sequenced clone |
CG5150 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5150 | 2008-04-29 | Release 5.5 accounting |
CG5150 | 2008-08-15 | Release 5.9 accounting |
CG5150 | 2008-12-18 | 5.12 accounting |
1792 bp (1792 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060626
> GH04680.complete CACGGTGAAAGTATCTCGAAAATGCTGAGTCTTAAGTTCTGGATTCGCCT CGGTCTGCTGACCGTCGTTTGGGGTGCAGCGGTTCCTGGAAGAGCCCCCG TGGACGAGGAGCGAATGCATCCACATCTGCCCACTAGTCCCAGGCTGCGT ACGATTTCCGGCGAGGAAACCCAGGAGTTCTGGCACTCGGCCAGCAAAAA ACTCATCCGCGAAAAGTTGGAGTTCGTGAGGAACACCAAGAAGGCCAAGA ACATTATACTGTTTTTGGGCGATGGCATGGGACTGGCTACTCTGGCTGCT GCCAGGAGTTACATTGGAGGCGAGGAGTTGAAGCTCTCCTTCGAAGAATT CCCCTTTACCGGACTATCGAAAACCTATTCGGTGGACAAAATAGTCCCCG ATAGCGCCTGTACCTCAACCTCATATCTCTGCGGAGTGAAGGCGAACTAC GGAACCATCGGCGTAAATGCGCATGTGAAGCGAGGCGACTGTGCGGCGAT GGCCAATGAAACGAACCATGTCTTCTCCCTGGGTAAATGGGCCATGGATG CGGGCAAAGCTGCTGGACTAGTGACCACCACCCGAGTGACCCACGCCTCG CCATCCGGAGTCTACGCCCATGTCGCCGATCGTGAATGGGAGAATAACGC TGTTCTCGAGGAGGCCTGCGGTGAGTTGTCAGATGGACTCCAGGACATAG CTGTCCAGTTGATTCACGGCGAGGTGGGCAGCAAACTCAAGGTCATGCTG GGTGGAGGCAAGCGAAGCTTCTATAGTCCGGAACACTACGACAAGGGCCG GCGCACTGATGGTCGTAATCTCGTCGAGGAATTCGAAGCCTTGGACGCGG GCAACACCTTTGTGAAAACGCAGAAGAAGCTGCTCAATGTGAACGCCACT GAAACCGGTAGATTGTTGGGCCTGTTCAGCAAGAGCCACATGCACTATCA TCTGGAGCAACTGGCCGATCCGGACAACAATGAGCCCACCTTGGAGGAGA TGACACAGAAGGCCATTGAAGTGCTGGAAACCGAAGAGCAGGGATACTTC CTTTTCGTTGAAGGAGGTAAAATCGACATCAGCCACCACGAAACAATGGC ACGAATTGCTTTGGATGAGACCGCTGAACTCTCGAAGGCGGTGAAGAAGG CTAGGGAGATGACCAACCCGGAGGAGACCCTCATTGTGGTGACCTCGGAT CACTCGCACACCTTCAGCGTTTCGGGATATCAACCACGAGGAAGCGACAT CTTTGGAGCTGCCAAGGCGAATGGCAAGGATGGCAAACCGTATCTGGCCT TGAGCTATGCCAACGGCAAGAGTTTCCAGGACTACTACAATACGGAGACC CACGAGCGCGTGGATCCCACCAGTCTGCCCACAATCGGAGACTTCGATCA GCTCTTCCCCGCGATGGTGCCCCTTGAATCGGAGACCCATGGCGGCGAGG ATGTGGGTGTCTTCGCCTCGGGACCCTGGGCACATCTCTTCACTGGCGTC TACGAACAGAACACCATTCCTCACATGATGGCATTCGCTGCCTGTGTGGG CGATGGACTAACCGCTTGCGATTAGGAATCCCAATCCGGCGATGATTGAC GGACAGAAGGACTCTTAATTAGCGCATCCACTAGACGATTCTCACGTACG CTTTATCGTTTTAAATGAATACTCAACATTTGACAGGTGCTGGAACACGC GGCTCTCGAGAAAAGAAATTCGATCGGGGATTACTAAAATCAATACTTCA ATAAACGTTTTCCTATCAATGTTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 5588137..5589909 | 1..1773 | 8835 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 16829132..16829241 | 1553..1444 | 220 | 80 | Minus |
chr3R | 27901430 | chr3R | 16830186..16830292 | 644..538 | 220 | 80.4 | Minus |
chr3L | 24539361 | chr3L | 5585860..5585923 | 1212..1149 | 185 | 85.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 5595565..5597343 | 1..1779 | 8895 | 100 | Plus |
3R | 32079331 | 3R | 21005271..21005380 | 1553..1444 | 220 | 80 | Minus |
3R | 32079331 | 3R | 21006325..21006431 | 644..538 | 220 | 80.4 | Minus |
3L | 28110227 | 3L | 5593288..5593351 | 1212..1149 | 185 | 85.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 5588665..5590443 | 1..1779 | 8895 | 100 | Plus |
3R | 31820162 | 3R | 20747156..20747262 | 644..538 | 220 | 80.3 | Minus |
3R | 31820162 | 3R | 20746102..20746211 | 1553..1444 | 220 | 80 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 5588137..5589909 | 1..1773 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5150-RA | 1..1554 | 22..1575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5150-RA | 1..1554 | 22..1575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5150-RA | 1..1554 | 22..1575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5150-RA | 1..1554 | 22..1575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5150-RA | 1..1554 | 22..1575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5150-RA | 20..1792 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5150-RA | 20..1792 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5150-RA | 24..1796 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5150-RA | 20..1792 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5150-RA | 24..1796 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5595565..5597337 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5595565..5597337 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5595565..5597337 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 5588665..5590437 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5588665..5590437 | 1..1773 | 100 | Plus |
Translation from 1 to 1574
> GH04680.hyp HGESISKMLSLKFWIRLGLLTVVWGAAVPGRAPVDEERMHPHLPTSPRLR TISGEETQEFWHSASKKLIREKLEFVRNTKKAKNIILFLGDGMGLATLAA ARSYIGGEELKLSFEEFPFTGLSKTYSVDKIVPDSACTSTSYLCGVKANY GTIGVNAHVKRGDCAAMANETNHVFSLGKWAMDAGKAAGLVTTTRVTHAS PSGVYAHVADREWENNAVLEEACGELSDGLQDIAVQLIHGEVGSKLKVML GGGKRSFYSPEHYDKGRRTDGRNLVEEFEALDAGNTFVKTQKKLLNVNAT ETGRLLGLFSKSHMHYHLEQLADPDNNEPTLEEMTQKAIEVLETEEQGYF LFVEGGKIDISHHETMARIALDETAELSKAVKKAREMTNPEETLIVVTSD HSHTFSVSGYQPRGSDIFGAAKANGKDGKPYLALSYANGKSFQDYYNTET HERVDPTSLPTIGDFDQLFPAMVPLESETHGGEDVGVFASGPWAHLFTGV YEQNTIPHMMAFAACVGDGLTACD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5150-PB | 517 | CG5150-PB | 1..517 | 8..524 | 2710 | 100 | Plus |
CG5150-PA | 517 | CG5150-PA | 1..517 | 8..524 | 2710 | 100 | Plus |
CG10827-PA | 522 | CG10827-PA | 20..521 | 24..523 | 1516 | 56.3 | Plus |
CG10592-PA | 524 | CG10592-PA | 27..514 | 36..517 | 1124 | 48.1 | Plus |
CG8147-PA | 546 | CG8147-PA | 61..532 | 53..518 | 1118 | 50 | Plus |
Translation from 21 to 1574
> GH04680.pep MLSLKFWIRLGLLTVVWGAAVPGRAPVDEERMHPHLPTSPRLRTISGEET QEFWHSASKKLIREKLEFVRNTKKAKNIILFLGDGMGLATLAAARSYIGG EELKLSFEEFPFTGLSKTYSVDKIVPDSACTSTSYLCGVKANYGTIGVNA HVKRGDCAAMANETNHVFSLGKWAMDAGKAAGLVTTTRVTHASPSGVYAH VADREWENNAVLEEACGELSDGLQDIAVQLIHGEVGSKLKVMLGGGKRSF YSPEHYDKGRRTDGRNLVEEFEALDAGNTFVKTQKKLLNVNATETGRLLG LFSKSHMHYHLEQLADPDNNEPTLEEMTQKAIEVLETEEQGYFLFVEGGK IDISHHETMARIALDETAELSKAVKKAREMTNPEETLIVVTSDHSHTFSV SGYQPRGSDIFGAAKANGKDGKPYLALSYANGKSFQDYYNTETHERVDPT SLPTIGDFDQLFPAMVPLESETHGGEDVGVFASGPWAHLFTGVYEQNTIP HMMAFAACVGDGLTACD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23984-PA | 517 | GF23984-PA | 1..517 | 1..517 | 2638 | 93.4 | Plus |
Dana\GF17005-PA | 524 | GF17005-PA | 11..522 | 8..516 | 1487 | 54.3 | Plus |
Dana\GF17006-PA | 464 | GF17006-PA | 5..462 | 2..516 | 1209 | 47.1 | Plus |
Dana\GF17216-PA | 543 | GF17216-PA | 5..535 | 4..517 | 1165 | 47.3 | Plus |
Dana\GF23560-PA | 523 | GF23560-PA | 1..514 | 1..517 | 1164 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15276-PA | 517 | GG15276-PA | 1..517 | 1..517 | 2676 | 96.3 | Plus |
Dere\GG15026-PA | 522 | GG15026-PA | 20..521 | 17..516 | 1542 | 56.9 | Plus |
Dere\GG14123-PA | 524 | GG14123-PA | 27..514 | 29..510 | 1158 | 48.5 | Plus |
Dere\GG16809-PA | 546 | GG16809-PA | 38..532 | 23..511 | 1134 | 48 | Plus |
Dere\GG13235-PA | 529 | GG13235-PA | 31..514 | 42..517 | 1130 | 47.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15197-PA | 525 | GH15197-PA | 19..525 | 15..517 | 2218 | 82.1 | Plus |
Dgri\GH19241-PA | 526 | GH19241-PA | 36..521 | 32..516 | 1487 | 56.9 | Plus |
Dgri\GH18436-PA | 542 | GH18436-PA | 8..532 | 10..516 | 1178 | 47.9 | Plus |
Dgri\GH15376-PA | 523 | GH15376-PA | 29..511 | 42..517 | 1155 | 49.4 | Plus |
Dgri\GH16243-PA | 525 | GH16243-PA | 16..515 | 10..510 | 1151 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Alp9-PB | 517 | CG5150-PB | 1..517 | 1..517 | 2710 | 100 | Plus |
Alp9-PA | 517 | CG5150-PA | 1..517 | 1..517 | 2710 | 100 | Plus |
Alp5-PA | 522 | CG10827-PA | 20..521 | 17..516 | 1516 | 56.3 | Plus |
Alp10-PA | 524 | CG10592-PA | 27..514 | 29..510 | 1124 | 48.1 | Plus |
phu-PA | 546 | CG8147-PA | 61..532 | 46..511 | 1118 | 50 | Plus |
Alp1-PA | 523 | CG5656-PA | 31..514 | 42..517 | 1110 | 47.7 | Plus |
Alp1-PB | 530 | CG5656-PB | 31..521 | 42..517 | 1093 | 47 | Plus |
Alp6-PA | 515 | CG1809-PA | 43..512 | 48..510 | 1041 | 46.5 | Plus |
Alp8-PB | 533 | CG3264-PB | 59..532 | 48..517 | 992 | 44.1 | Plus |
Alp8-PA | 533 | CG3264-PA | 59..532 | 48..517 | 992 | 44.1 | Plus |
Alp7-PA | 543 | CG3292-PA | 65..540 | 48..517 | 967 | 44.6 | Plus |
Alp2-PA | 538 | CG3290-PA | 60..531 | 48..516 | 955 | 42.6 | Plus |
Alp11-PA | 483 | CG8105-PA | 42..474 | 54..517 | 838 | 41.5 | Plus |
Alp4-PA | 596 | CG1462-PA | 52..541 | 49..510 | 823 | 38.9 | Plus |
Alp12-PE | 596 | CG16771-PE | 109..579 | 51..510 | 786 | 38.5 | Plus |
Alp12-PD | 596 | CG16771-PD | 109..579 | 51..510 | 786 | 38.5 | Plus |
Alp12-PC | 596 | CG16771-PC | 109..579 | 51..510 | 786 | 38.5 | Plus |
Alp12-PB | 596 | CG16771-PB | 109..579 | 51..510 | 786 | 38.5 | Plus |
Alp12-PA | 596 | CG16771-PA | 109..579 | 51..510 | 786 | 38.5 | Plus |
Alp4-PB | 502 | CG1462-PB | 1..447 | 86..510 | 747 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12135-PA | 526 | GI12135-PA | 19..526 | 15..517 | 2095 | 78.2 | Plus |
Dmoj\GI22009-PA | 526 | GI22009-PA | 9..520 | 8..516 | 1547 | 57.1 | Plus |
Dmoj\GI24012-PA | 547 | GI24012-PA | 1..536 | 2..516 | 1167 | 45.8 | Plus |
Dmoj\GI13179-PA | 525 | GI13179-PA | 23..516 | 22..510 | 1152 | 47.6 | Plus |
Dmoj\GI12980-PA | 503 | GI12980-PA | 10..494 | 42..517 | 1136 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23248-PA | 525 | GL23248-PA | 10..523 | 8..516 | 1586 | 57.9 | Plus |
Dper\GL12007-PA | 538 | GL12007-PA | 16..528 | 12..510 | 1136 | 46.6 | Plus |
Dper\GL17170-PA | 520 | GL17170-PA | 4..513 | 9..510 | 1113 | 46.8 | Plus |
Dper\GL12298-PA | 214 | GL12298-PA | 1..209 | 307..516 | 1017 | 89.5 | Plus |
Dper\GL16939-PA | 542 | GL16939-PA | 64..539 | 48..517 | 993 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18693-PA | 522 | GA18693-PA | 3..517 | 2..516 | 2396 | 86.2 | Plus |
Dpse\GA10582-PA | 525 | GA10582-PA | 10..523 | 8..516 | 1588 | 57.9 | Plus |
Dpse\GA24639-PA | 521 | GA24639-PA | 29..512 | 42..517 | 1174 | 49.8 | Plus |
Dpse\GA20850-PA | 543 | GA20850-PA | 1..527 | 8..509 | 1145 | 47.2 | Plus |
Dpse\GA10422-PA | 537 | GA10422-PA | 16..528 | 12..510 | 1132 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14710-PA | 517 | GM14710-PA | 1..517 | 1..517 | 2710 | 97.5 | Plus |
Dsec\GM15118-PA | 522 | GM15118-PA | 20..521 | 17..516 | 1535 | 56.9 | Plus |
Dsec\GM13909-PA | 524 | GM13909-PA | 27..514 | 29..510 | 1146 | 48.3 | Plus |
Dsec\GM23808-PA | 546 | GM23808-PA | 38..532 | 23..511 | 1145 | 48.2 | Plus |
Dsec\GM22140-PA | 523 | GM22140-PA | 31..514 | 42..517 | 1143 | 48.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13892-PA | 511 | GD13892-PA | 1..511 | 1..517 | 2676 | 96.9 | Plus |
Dsim\GD20021-PA | 521 | GD20021-PA | 20..520 | 17..516 | 1467 | 55.5 | Plus |
Dsim\GD13186-PA | 524 | GD13186-PA | 27..514 | 29..510 | 1147 | 48.3 | Plus |
Dsim\GD18617-PA | 546 | GD18617-PA | 38..532 | 23..511 | 1142 | 48.2 | Plus |
Dsim\GD25137-PA | 533 | GD25137-PA | 63..532 | 52..517 | 999 | 44.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13410-PA | 526 | GJ13410-PA | 10..526 | 6..517 | 2162 | 79 | Plus |
Dvir\GJ10462-PA | 520 | GJ10462-PA | 9..517 | 8..516 | 1549 | 57.4 | Plus |
Dvir\GJ23643-PA | 545 | GJ23643-PA | 1..535 | 2..516 | 1166 | 46.1 | Plus |
Dvir\GJ11955-PA | 528 | GJ11955-PA | 34..519 | 29..510 | 1156 | 49.1 | Plus |
Dvir\GJ13123-PA | 521 | GJ13123-PA | 30..512 | 42..517 | 1149 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17300-PA | 524 | GK17300-PA | 22..524 | 19..517 | 2172 | 81.9 | Plus |
Dwil\GK11139-PA | 529 | GK11139-PA | 39..521 | 32..516 | 1435 | 54.9 | Plus |
Dwil\GK10963-PA | 547 | GK10963-PA | 61..537 | 48..516 | 1190 | 50.1 | Plus |
Dwil\GK16879-PA | 530 | GK16879-PA | 34..521 | 31..510 | 1141 | 48.3 | Plus |
Dwil\GK16996-PA | 534 | GK16996-PA | 46..525 | 46..517 | 1138 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21498-PA | 517 | GE21498-PA | 1..517 | 1..517 | 2673 | 95.9 | Plus |
Dyak\GE25027-PA | 522 | GE25027-PA | 20..521 | 17..516 | 1522 | 56.4 | Plus |
Dyak\GE20547-PA | 524 | GE20547-PA | 22..514 | 26..510 | 1144 | 47.8 | Plus |
Dyak\GE25953-PA | 548 | GE25953-PA | 65..534 | 48..511 | 1141 | 49.3 | Plus |
Dyak\GE22974-PA | 523 | GE22974-PA | 31..514 | 42..517 | 1134 | 47.6 | Plus |