BDGP Sequence Production Resources |
Search the DGRC for GH04763
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 47 |
Well: | 63 |
Vector: | pOT2 |
Associated Gene/Transcript | DCP1-RA |
Protein status: | GH04763.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1216 |
Gene | Date | Evidence |
---|---|---|
CG11183 | 2001-01-01 | Release 2 assignment |
CG11183 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11183 | 2005-03-18 | Blastp of sequenced clone |
Dcp1 | 2008-04-29 | Release 5.5 accounting |
Dcp1 | 2008-08-15 | Release 5.9 accounting |
Dcp1 | 2008-12-18 | 5.12 accounting |
1216 bp (1216 high quality bases) assembled on 2005-03-18
GenBank Submission: BT021964
> GH04763.complete CAATTCGCAATAGCACAGCCAAAACTGAAGATTACATACAATTTACAATG GCCGACGAGAGCATCACGCGAATGAACCTGGCGGCCATCAAGAAGATCGA CCCGTACGCCAAGGAGATCGTGGATTCGTCCTCGCACGTCGCCTTCTACA CGTTCAACTCGTCGCAGAACGAGTGGGAAAAGACCGATGTGGAGGGAGCC TTCTTCATATACCACCGCAACGCGGAGCCCTTTCACAGCATCTTCATCAA CAACCGACTGAACACCACGTCCTTCGTGGAGCCCATCACCGGCAGCCTGG AGCTGCAGTCGCAGCCGCCGTTCCTGCTCTACCGCAACGAGCGCTCGCGC ATCCGCGGCTTCTGGTTCTACAACAGCGAGGAGTGCGACCGCATCAGCGG CTTGGTGAACGGGCTGCTCAAGTCCAAGGATCAGGGAACGAATGGCCAGG CCCAGCGTCACGTCTCCGCGCCCCAGCAGCCAAAGCAGGACAGCAGCCAG CCGGCCAGCATATTCAACATGCTGACCAAGGCCCAGAAGGACTACAATGC CCAGGTGAGCGGCGGGCAGCCGAAGACGCCTTCGGCGGAGAACGTAACGG CCGGCAATGTGTTGAAGTTCTTCGAATCGGCCAAGCAGGCCACGGCAGAG TCACTGTTCCACCGCGTCCAGCCGCTCTCCGTGGACCAGCTGGAGAAACA GCAGCGGGCAGCCACGCCTGGCGAGGATCTGTTGCCCCCGGCAGGCAGGG ACAATCACGAGAGCCGGCTGTCGCCCTTCCAGAAGATGCAGCAGCTTAAC ATTCAGCTCCTGAGCGACCTGAAGATCGGTAAAAGCTACGCTACGGCTCA ATCTCCGACAGTCGCCCCGTCCTCGTCGGCGCTGATGGCCAACGACGATG CCGGCAAGTGCTTGCGGAGACTGCTGGCTGGCGACAAGCCCGGGCCGGCC CTCATGCCGCCCACCATGTTCGACGCGCCCAACAACGGCAATCCGGAGCC ACAGCAGCCACAGCAGCCACAGCAGCCACTGCTGAACTCGACGCAGTTCG TCCAGGCCTTCACGTACCTTATCCAGAACGATAAGGAGTTTGCCAACAAG CTGCACAAGGCCTACCTGAACGGCTGTTCCAATCTACTGCTGGACTCCAG CTCCACATATCAATAAACAGAAATATTCAACATTTCCGAAAAAAAAAAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19775095..19776282 | 1188..1 | 5940 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23889050..23890239 | 1190..1 | 5950 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23890249..23891438 | 1190..1 | 5950 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19775095..19776282 | 1..1188 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dcp1-RB | 1..1119 | 48..1166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dcp1-RA | 1..1119 | 48..1166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dcp1-RA | 1..1119 | 48..1166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
DCP1-RA | 1..1119 | 48..1166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dcp1-RA | 27..1214 | 1..1188 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dcp1-RA | 27..1214 | 1..1188 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dcp1-RA | 38..1225 | 1..1188 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dcp1-RA | 27..1214 | 1..1188 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
DCP1-RA | 38..1225 | 1..1188 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23889052..23890239 | 1..1188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23889052..23890239 | 1..1188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23889052..23890239 | 1..1188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19776575..19777762 | 1..1188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23890269..23891456 | 1..1188 | 100 | Minus |
Translation from 2 to 1165
> GH04763.hyp IRNSTAKTEDYIQFTMADESITRMNLAAIKKIDPYAKEIVDSSSHVAFYT FNSSQNEWEKTDVEGAFFIYHRNAEPFHSIFINNRLNTTSFVEPITGSLE LQSQPPFLLYRNERSRIRGFWFYNSEECDRISGLVNGLLKSKDQGTNGQA QRHVSAPQQPKQDSSQPASIFNMLTKAQKDYNAQVSGGQPKTPSAENVTA GNVLKFFESAKQATAESLFHRVQPLSVDQLEKQQRAATPGEDLLPPAGRD NHESRLSPFQKMQQLNIQLLSDLKIGKSYATAQSPTVAPSSSALMANDDA GKCLRRLLAGDKPGPALMPPTMFDAPNNGNPEPQQPQQPQQPLLNSTQFV QAFTYLIQNDKEFANKLHKAYLNGCSNLLLDSSSTYQ*
Translation from 47 to 1165
> GH04763.pep MADESITRMNLAAIKKIDPYAKEIVDSSSHVAFYTFNSSQNEWEKTDVEG AFFIYHRNAEPFHSIFINNRLNTTSFVEPITGSLELQSQPPFLLYRNERS RIRGFWFYNSEECDRISGLVNGLLKSKDQGTNGQAQRHVSAPQQPKQDSS QPASIFNMLTKAQKDYNAQVSGGQPKTPSAENVTAGNVLKFFESAKQATA ESLFHRVQPLSVDQLEKQQRAATPGEDLLPPAGRDNHESRLSPFQKMQQL NIQLLSDLKIGKSYATAQSPTVAPSSSALMANDDAGKCLRRLLAGDKPGP ALMPPTMFDAPNNGNPEPQQPQQPQQPLLNSTQFVQAFTYLIQNDKEFAN KLHKAYLNGCSNLLLDSSSTYQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12057-PA | 357 | GF12057-PA | 1..357 | 1..372 | 1407 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19983-PA | 363 | GG19983-PA | 1..363 | 1..372 | 1878 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21691-PA | 374 | GH21691-PA | 1..374 | 1..372 | 1162 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
DCP1-PB | 372 | CG11183-PB | 1..372 | 1..372 | 1931 | 100 | Plus |
DCP1-PA | 372 | CG11183-PA | 1..372 | 1..372 | 1931 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18845-PA | 372 | GI18845-PA | 1..372 | 1..372 | 1211 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10921-PA | 343 | GL10921-PA | 1..336 | 1..357 | 1236 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10823-PA | 343 | GA10823-PA | 1..336 | 1..357 | 1240 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15497-PA | 366 | GM15497-PA | 1..366 | 1..372 | 1903 | 96.8 | Plus |
Dsec\GM13666-PA | 82 | GM13666-PA | 1..82 | 1..82 | 419 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25000-PA | 366 | GD25000-PA | 1..366 | 1..372 | 1914 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21878-PA | 363 | GJ21878-PA | 1..363 | 1..372 | 1190 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15859-PA | 380 | GK15859-PA | 1..380 | 1..372 | 1301 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11516-PA | 367 | GE11516-PA | 1..367 | 1..372 | 1870 | 95.2 | Plus |