Clone GH04784 Report

Search the DGRC for GH04784

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:47
Well:84
Vector:pOT2
Associated Gene/TranscriptCG7582-RA
Protein status:GH04784.pep: gold
Sequenced Size:2292

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7582 2003-01-01 Sim4 clustering to Release 3
CG7582 2008-04-29 Release 5.5 accounting
RpS6 2008-08-15 Release 5.9 accounting
CG7582 2008-08-15 Release 5.9 accounting
CG7582 2008-12-18 5.12 accounting
RpS6 2008-12-18 5.12 accounting

Clone Sequence Records

GH04784.complete Sequence

2292 bp (2292 high quality bases) assembled on 2005-10-06

GenBank Submission: BT023909

> GH04784.complete
TTGGCCGACCGTGCGCAACGTGTTCTTTTTCCATTGTTTTCATTTTCGGG
GGGGCACTGTATAGTTTTGTTTATTTTCCATTCCGCGCTCGCATCGTGTG
AAAGTGCAGCTTGGCTGGCTCGGATTTTTTTTTAACCCTCTCTAATAGTT
GTAATTTGCACTAATTACGGCCGCAATGAACGATTTCGGGCAGTTCGCTA
AGTCGCAAGGCCCAAAGTTGGTGCCATTCCTGGTTACTATTGTCCTATAC
TTCTCGCTGGTGAGGAAGGATCCTCAAGGAGAGCTATGGACCACCGTGCT
CAAATGCCTGCCCATTTTCGCGCTTGTATTCTATGTGGTGGCCAAGGGAA
TCTCGCTCAAGAAGGAATACCGTCGCTCACTTTGGATTCTATTGGGTCTG
GTTTTCTCGAGTGGTGGTGATGCTCTGCTCAACATAAATCTCTTTCCCTT
CGGAATGATCTCCTTTGGAGTGGCGCACGTGTTTTATATCAGCGCCTTTG
GCTGGAAGCCCATAAAGTGGTTCATTGGACTGCTCTTGTACGTGGCCGTA
TCGCTTTGTAAGTTTACTGGTCATTATATACGTATACCTTACCTGGAATA
TTTGAAACCCCCAGTTGTTTACTTCGTGCACACGAAACTGGACGAGATTC
TCATCATCGGAGTGCCCATCTACTGTTTCCTGATCACCACAATGCTGTGG
AGATCGCTGGCCCGCGCCGTGGACTCCAGGAACTTCCTCGCCGTGTTCTG
TGCCATCGGAGCCATTCTGTTTGTGATCTCCGACGCCCTGATCGCGGTCA
CCATGTTCGTGGGCGTGCCCCTGCCCTGCGCCCGCCTCCAGATCATGATC
ACCTACTACGCCGCCCAGTTTGCCATTGCGCTGAGCACCGCGGACGACGG
TCCTGCCCTCCAGCGCTCCCTTCGCAAGAAAATTAAGTGAAGCCAGTGCC
CAGTGCTCATCTGTCGGAGGCCCAGAGACAACATGAACGCAACCACCAAA
CTTAGTACTTCCAAAGCGTCTAGAGTATTGCCATTTACGTGTGTTGGTTT
CCCCATCCCAGTAGCTTAGTGCAACCAAATATTTGTTCCCTTTCTGATGG
ATGTGGAAACGGATCTTAGTAGTTTACTAGATGTTTGTTGACTTCAAAGT
AATAAATATATCAATAATAGGTTCTATTAACTATTTTATTAAAAAAAAAA
AAAAAAAACTCGAGTTTTTTTTTTTTTTTTTTTTTCATAACAATAGATAT
ATAGCATATACTTTATTAAGAGTAATAATTTGCATTAAATTACTATATAA
ACGATTCTCTGACGACAACGCCAAAACAACAAAGACACAGCCTGGAACCA
GCCACAAATCCTCGTGCCGAATTCGGCACGAGAACAGACCGACAATATGA
AGCTCAACGTTTCCTATCCCGCGACGGGATGCCAAAAGCTATTCGAAGTG
GTCGACGAGCACAAGCTGCGCGTCTTCTACGAGAAGCGTATGGGACAGGT
TGTGGAGGCCGATATCCTCGGTGACGAGTGGAAGGGCTACCAGCTGCGCA
TCGCCGGCGGCAACGACAAGCAGGGATTCCCCATGAAGCAGGGTGTCTTG
ACCCACGGCCGTGTGCGTCTGCTCCTGAAGAAGGGACACTCCTGCTACCG
TCCACGCCGCACTGGCGAGCGTAAGCGCAAGTCTGTGCGTGGATGCATCG
TGGACGCCAACATGTCTGTGCTGGCTCTGGTCGTCTTGAAGAAGGGTGAG
AAGGACATTCCCGGTCTCACCGACACCACCATCCCACGTCGCCTGGGACC
CAAGCGTGCTAGCAAGATCCGCAAGCTCTACAACTTGAGCAAGGAAGATG
ATGTGCGTCGCTTCGTTGTGCGTCGCCCTTTGCCCGCCAAGGACAACAAG
AAGGCCACCTCCAAGGCCCCCAAAATTCAGCGCCTGATCACCCCCGTTGT
GCTGCAGCGCAAGCACCGTCGCATTGCGCTGAAGAAGAAGCGCCAGATCG
CTTCCAAGGAGGCTTCCGCCGACTACGCCAAGCTGTTGGTGCAGCGCAAG
AAGGAGTCCAAGGCCAAGCGCGAGGAGGCCAAGCGCCGCCGTTCTGCCTC
CATTCGCGAGTCCAAGAGCTCTGTCTCCAGCGACAAGAAGTAAACACCGC
GACACGGAACCCACATTCTTCGTTTAAGCAGAAACTGAACGTTGATCACA
ACCAAATGATCCACGAGAGGAGAAATAAAACTTTGTAACCATTTATGTTA
AATAAACGCGATAAATGGTATAGAAAAAAAAAAAAAAAAAAA

GH04784.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:27:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG7582-RA 1170 CG7582-RA 1..1170 1..1170 5850 100 Plus
RpS6-RB 1164 RpS6-RB 115..1007 1383..2275 4465 100 Plus
RpS6-RA 1228 RpS6-RA 352..1226 1401..2275 4375 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:04:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 25502854..25503682 1195..367 4055 99.3 Minus
chrX 22417052 chrX 7791523..7792189 2273..1607 3320 99.9 Minus
chrX 22417052 chrX 7792701..7792908 1608..1401 1040 100 Minus
chr3R 27901430 chr3R 25504462..25504660 197..1 930 99 Minus
chr3R 27901430 chr3R 25503745..25503914 366..197 850 100 Minus
chr3R 27901430 chr3R 3727058..3727186 1360..1232 645 100 Minus
chrX 22417052 chrX 7789185..7789389 2201..1983 415 81.4 Minus
chrX 22417052 chrX 7790375..7790579 2201..1983 415 81.4 Minus
chrX 22417052 chrX 7789502..7789624 1744..1622 195 77.2 Minus
chrX 22417052 chrX 7790692..7790814 1744..1622 195 77.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:31:56
Subject Length Description Subject Range Query Range Score Percent Strand
CR11386-RB 429 CR11386-RB 284..373 1983..2072 270 86.6 Plus
CR11386-RB 429 CR11386-RB 49..171 1622..1744 195 77.2 Plus
CR11386-RB 429 CR11386-RB 362..429 2076..2143 175 83.8 Plus
CR11386-RB 429 CR11386-RB 180..250 1783..1853 175 83 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29680236..29681064 1195..367 4145 100 Minus
X 23542271 X 7899622..7900290 2275..1607 3345 100 Minus
X 23542271 X 7900802..7901009 1608..1401 1040 100 Minus
3R 32079331 3R 29681845..29682041 197..1 985 100 Minus
3R 32079331 3R 29681127..29681296 366..197 850 100 Minus
3R 32079331 3R 7901023..7901151 1360..1232 645 100 Minus
X 23542271 X 7897286..7897490 2201..1983 415 81.4 Minus
X 23542271 X 7898476..7898680 2201..1983 415 81.4 Minus
X 23542271 X 7897603..7897725 1744..1622 195 77.2 Minus
X 23542271 X 7898793..7898915 1744..1622 195 77.2 Minus
X 23542271 X 7897246..7897285 2275..2236 185 97.5 Minus
X 23542271 X 7898436..7898475 2275..2236 185 97.5 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:19:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 29421067..29421895 1195..367 4145 100 Minus
X 23527363 X 7907720..7908388 2275..1607 3345 100 Minus
X 23527363 X 7908900..7909107 1608..1401 1040 100 Minus
3R 31820162 3R 29422676..29422872 197..1 985 100 Minus
3R 31820162 3R 29421958..29422127 366..197 850 100 Minus
3R 31820162 3R 7641854..7641982 1360..1232 645 100 Minus
X 23527363 X 7905384..7905510 2201..2076 370 87.4 Minus
X 23527363 X 7906574..7906700 2201..2076 370 87.4 Minus
X 23527363 X 7905499..7905588 2072..1983 270 86.6 Minus
X 23527363 X 7906689..7906778 2072..1983 270 86.6 Minus
X 23527363 X 7906891..7907013 1744..1622 195 77.2 Minus
X 23527363 X 7905701..7905823 1744..1622 195 77.2 Minus
X 23527363 X 7906534..7906573 2275..2236 185 97.5 Minus
X 23527363 X 7905344..7905383 2275..2236 185 97.5 Minus
X 23527363 X 7906812..7906882 1853..1783 175 83 Minus
X 23527363 X 7905622..7905692 1853..1783 175 83 Minus
Blast to na_te.dros performed 2019-03-16 06:04:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsil\Loa 7779 Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). 192..261 1186..1115 120 66.7 Minus

GH04784.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:06:03 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 25502854..25503682 367..1195 99 <- Minus
chr3R 25503745..25503914 197..366 100 <- Minus
chr3R 25504463..25504660 1..196 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:37:17 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
CG7582-RA 1..765 176..940 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:49:57 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
CG7582-RA 1..765 176..940 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:43:57 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
CG7582-RA 1..765 176..940 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:30:45 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
CG7582-RA 1..765 176..940 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:11:42 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
CG7582-RA 1..765 176..940 100   Plus
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:31:57 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:37:17 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
CG7582-RA 1..1170 1..1170 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:49:57 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
CG7582-RA 1..1170 1..1170 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:43:57 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
CG7582-RA 1..1190 1..1190 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:30:45 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
CG7582-RA 1..1170 1..1170 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:11:42 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
CG7582-RA 1..1190 1..1190 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:06:03 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29681846..29682041 1..196 100   Minus
3R 29680236..29681064 367..1195 100 <- Minus
3R 29681127..29681296 197..366 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:06:03 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29681846..29682041 1..196 100   Minus
3R 29680236..29681064 367..1195 100 <- Minus
3R 29681127..29681296 197..366 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:06:03 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29681846..29682041 1..196 100   Minus
3R 29680236..29681064 367..1195 100 <- Minus
3R 29681127..29681296 197..366 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:43:57 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25507568..25507763 1..196 100   Minus
arm_3R 25505958..25506786 367..1195 100 <- Minus
arm_3R 25506849..25507018 197..366 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:09:08 Download gff for GH04784.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29421067..29421895 367..1195 100 <- Minus
3R 29421958..29422127 197..366 100 <- Minus
3R 29422677..29422872 1..196 100   Minus

GH04784.pep Sequence

Translation from 175 to 939

> GH04784.pep
MNDFGQFAKSQGPKLVPFLVTIVLYFSLVRKDPQGELWTTVLKCLPIFAL
VFYVVAKGISLKKEYRRSLWILLGLVFSSGGDALLNINLFPFGMISFGVA
HVFYISAFGWKPIKWFIGLLLYVAVSLCKFTGHYIRIPYLEYLKPPVVYF
VHTKLDEILIIGVPIYCFLITTMLWRSLARAVDSRNFLAVFCAIGAILFV
ISDALIAVTMFVGVPLPCARLQIMITYYAAQFAIALSTADDGPALQRSLR
KKIK*

GH04784.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:00:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22875-PA 237 GF22875-PA 1..237 1..254 1040 80.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:00:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12009-PA 317 GG12009-PA 1..65 1..65 332 95.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 23:00:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18684-PA 229 GH18684-PA 2..229 6..254 807 66.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG7582-PA 254 CG7582-PA 1..254 1..254 1311 100 Plus
CG7582-PB 142 CG7582-PB 1..142 94..254 684 87.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 23:00:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24195-PA 233 GI24195-PA 1..224 1..243 828 67.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 23:00:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13582-PA 235 GL13582-PA 1..235 1..254 1017 77.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:00:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20455-PA 235 GA20455-PA 1..235 1..254 1017 77.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12231-PA 235 GM12231-PA 1..235 1..254 1137 89 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 23:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17691-PA 45 GD17691-PA 1..45 210..254 228 97.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 23:00:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11568-PA 186 GJ11568-PA 2..176 49..242 451 51 Plus
Dvir\GJ10541-PA 84 GJ10541-PA 1..79 51..129 314 73.4 Plus
Dvir\GJ10543-PA 80 GJ10543-PA 1..71 173..243 298 83.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 23:00:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11173-PA 240 GK11173-PA 9..240 8..252 908 70.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:00:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10440-PA 235 GE10440-PA 1..235 1..254 1135 88.6 Plus

GH04784.hyp Sequence

Translation from 175 to 939

> GH04784.hyp
MNDFGQFAKSQGPKLVPFLVTIVLYFSLVRKDPQGELWTTVLKCLPIFAL
VFYVVAKGISLKKEYRRSLWILLGLVFSSGGDALLNINLFPFGMISFGVA
HVFYISAFGWKPIKWFIGLLLYVAVSLCKFTGHYIRIPYLEYLKPPVVYF
VHTKLDEILIIGVPIYCFLITTMLWRSLARAVDSRNFLAVFCAIGAILFV
ISDALIAVTMFVGVPLPCARLQIMITYYAAQFAIALSTADDGPALQRSLR
KKIK*

GH04784.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:46:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG7582-PA 254 CG7582-PA 1..254 1..254 1311 100 Plus
CG7582-PB 142 CG7582-PB 1..142 94..254 684 87.6 Plus