BDGP Sequence Production Resources |
Search the DGRC for GH04846
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 48 |
Well: | 46 |
Vector: | pOT2 |
Associated Gene/Transcript | RagA-B-RA |
Protein status: | GH04846.pep: gold |
Preliminary Size: | 1497 |
Sequenced Size: | 1407 |
Gene | Date | Evidence |
---|---|---|
CG11968 | 2001-01-01 | Release 2 assignment |
CG11968 | 2001-07-04 | Blastp of sequenced clone |
CG11968 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11968 | 2008-04-29 | Release 5.5 accounting |
CG11968 | 2008-08-15 | Release 5.9 accounting |
CG11968 | 2008-12-18 | 5.12 accounting |
1407 bp (1407 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047538
> GH04846.complete CACTAACCCAGCCTATTATTTGTTTTTATTGTTGATTATTTTCCTGGAGA TCTAAAAAACCAGCGGCACAATGAAGAAAAAGGTGTTACTGATGGGGAAG AGCGGATCCGGAAAGACCAGCATGCGCTCCATTATCTTTGCTAACTATAT CGCCCGTGATACGACACGCCTCGGAGCAACAATCGATGTGGAGCACTCCC ATGTGCGGTTTCTGGGCAACCTGGTGCTTAATCTCTGGGACTGTGGCGGT CAGGAGGGCTTCATGAAGCAGTACTTTGCCCAGCAGCGAGACAACATCTT TCGTAATGTGGAAGTGCTGATTTATGTGTTTGATGTGGAGAGCCAGGAGA TAGAGCGCGACATCCATTACTACCAGAGCTGCCTGGAGGCACTGCTGCAG AATTCGCCTGAGGCCAAGATATTCTGTCTGGTGCACAAAATGGACCTGGT GCCGGAAGGCTTGCGCGAGAGTGTGTTTACTGAGCGCATGGAGGATCTCA TAAAATTATCAAAGCCCGGAAATGTCACCTGTTTCCGTACCAGCATTTGG GATGAAACATTATACAAAGCCTGGTCTTCCATTGTCACGATGCTGATACC AAATGTTGCCGCCCTGGAGAACTCTGTGACACATTTCGGAAATGTAATTG AGGCGGACGAGGTGCTGTTGTTCGAAAAGGCTACCTTTTTGGTGATCTCC CATTGCCAGAGCAAGAAGAACCGCGACTCGCACCGCTTTGAAAAGGTGTC CAACATCATCAAGCAGTTCAAGCTGAGCTGTTCGAAGTTGGGCGCTAAGT TCCAATCGATGGAGGTGCGCAATAGCGCATTTGCCGCTTTCATTGACACC TTCACCAGCAACACCTACGTGATGGTGGTCATGTCGGATCCCACGCTGCC CTCGGAGGCTACGCTAGTCAACATAAGGAACGCTCGGAAGTACTTTGAGG AGCTGGAAAATCCAAGCAACAGTGCCATTAACCATCATGGCCAAAGGTAC CATTGATGATAGTCAAACGAGAATTGTTGTTTTCCATAACTCCATTTGCC GTTCTCCGTTCAAAAAGACATGAATACCGTCTGTTGTTTTGCAAACATCG AAGCGCCCAAGGTGCCGCCCCAAAGTCTTACAGCTTCCCGTAACTATAAA TACGTATATATGTTTTTTATCGCTCACTTCCTTCATGACTGCCATAATAG TTAATGGTGTAATTGTAAATATGGCAGTCCCACATACATAATAGCTTTCT TGAGTTGTGAAGGTCGTAGTGAGTGAGCGATGGATAGCCATCTCCTTCGT TGATTTTTCGTAGATTTGTAAGTTTAAACCTTTGTAGGCCTTAAGTTTAT ATACAAAAACAATTACACACTTATAAATACGAAAAACAAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4808625..4809441 | 1387..568 | 4005 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 4809503..4809887 | 567..183 | 1925 | 100 | Minus |
chr3R | 27901430 | chr3R | 4809945..4810046 | 182..81 | 510 | 100 | Minus |
chr3R | 27901430 | chr3R | 4810099..4810184 | 86..1 | 430 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 8982730..8983551 | 1389..568 | 4110 | 100 | Minus |
3R | 32079331 | 3R | 8983613..8983997 | 567..183 | 1925 | 100 | Minus |
3R | 32079331 | 3R | 8984055..8984156 | 182..81 | 510 | 100 | Minus |
3R | 32079331 | 3R | 8984209..8984294 | 86..1 | 430 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 8723561..8724382 | 1389..568 | 4110 | 100 | Minus |
3R | 31820162 | 3R | 8724444..8724828 | 567..183 | 1925 | 100 | Minus |
3R | 31820162 | 3R | 8724886..8724987 | 182..81 | 510 | 100 | Minus |
3R | 31820162 | 3R | 8725040..8725125 | 86..1 | 430 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 6446..6622 | 1361..1194 | 124 | 57.3 | Minus |
Ivk | 5402 | Ivk IVK 5402bp | 1797..1848 | 1189..1240 | 116 | 69.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4808625..4809441 | 568..1387 | 99 | <- | Minus |
chr3R | 4809503..4809887 | 183..567 | 100 | <- | Minus |
chr3R | 4809945..4810044 | 83..182 | 100 | <- | Minus |
chr3R | 4810103..4810184 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11968-RA | 1..936 | 71..1006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RagA-RA | 1..936 | 71..1006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RagA-B-RA | 1..936 | 71..1006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11968-RA | 1..936 | 71..1006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RagA-B-RA | 1..936 | 71..1006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11968-RA | 14..1400 | 1..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RagA-RA | 14..1400 | 1..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RagA-B-RA | 14..1400 | 1..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11968-RA | 14..1400 | 1..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RagA-B-RA | 22..1408 | 1..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8982732..8983551 | 568..1387 | 100 | <- | Minus |
3R | 8983613..8983997 | 183..567 | 100 | <- | Minus |
3R | 8984055..8984154 | 83..182 | 100 | <- | Minus |
3R | 8984213..8984294 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8982732..8983551 | 568..1387 | 100 | <- | Minus |
3R | 8983613..8983997 | 183..567 | 100 | <- | Minus |
3R | 8984055..8984154 | 83..182 | 100 | <- | Minus |
3R | 8984213..8984294 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8982732..8983551 | 568..1387 | 100 | <- | Minus |
3R | 8983613..8983997 | 183..567 | 100 | <- | Minus |
3R | 8984055..8984154 | 83..182 | 100 | <- | Minus |
3R | 8984213..8984294 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4808454..4809273 | 568..1387 | 100 | <- | Minus |
arm_3R | 4809335..4809719 | 183..567 | 100 | <- | Minus |
arm_3R | 4809777..4809876 | 83..182 | 100 | <- | Minus |
arm_3R | 4809935..4810016 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8723563..8724382 | 568..1387 | 100 | <- | Minus |
3R | 8724444..8724828 | 183..567 | 100 | <- | Minus |
3R | 8724886..8724985 | 83..182 | 100 | <- | Minus |
3R | 8725044..8725125 | 1..82 | 100 | Minus |
Translation from 70 to 1005
> GH04846.pep MKKKVLLMGKSGSGKTSMRSIIFANYIARDTTRLGATIDVEHSHVRFLGN LVLNLWDCGGQEGFMKQYFAQQRDNIFRNVEVLIYVFDVESQEIERDIHY YQSCLEALLQNSPEAKIFCLVHKMDLVPEGLRESVFTERMEDLIKLSKPG NVTCFRTSIWDETLYKAWSSIVTMLIPNVAALENSVTHFGNVIEADEVLL FEKATFLVISHCQSKKNRDSHRFEKVSNIIKQFKLSCSKLGAKFQSMEVR NSAFAAFIDTFTSNTYVMVVMSDPTLPSEATLVNIRNARKYFEELENPSN SAINHHGQRYH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17274-PA | 311 | GF17274-PA | 1..311 | 1..311 | 1604 | 94.9 | Plus |
Dana\GF11205-PA | 387 | GF11205-PA | 40..229 | 2..189 | 159 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17406-PA | 311 | GG17406-PA | 1..311 | 1..311 | 1659 | 98.4 | Plus |
Dere\GG10668-PA | 385 | GG10668-PA | 40..250 | 2..210 | 158 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18582-PA | 311 | GH18582-PA | 1..311 | 1..311 | 1536 | 90.4 | Plus |
Dgri\GH19979-PA | 389 | GH19979-PA | 40..229 | 2..189 | 167 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RagA-B-PA | 311 | CG11968-PA | 1..311 | 1..311 | 1607 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24512-PA | 311 | GI24512-PA | 1..311 | 1..311 | 1507 | 89.4 | Plus |
Dmoj\GI20265-PA | 393 | GI20265-PA | 46..256 | 2..210 | 192 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21660-PA | 311 | GL21660-PA | 1..311 | 1..311 | 1565 | 92.9 | Plus |
Dper\GL17373-PA | 349 | GL17373-PA | 12..201 | 2..189 | 158 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11302-PA | 311 | GA11302-PA | 1..311 | 1..311 | 1563 | 92.6 | Plus |
Dpse\GA21270-PA | 349 | GA21270-PA | 12..201 | 2..189 | 158 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26296-PA | 311 | GM26296-PA | 1..311 | 1..311 | 1665 | 99 | Plus |
Dsec\GM20713-PA | 412 | GM20713-PA | 67..277 | 2..210 | 160 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20832-PA | 311 | GD20832-PA | 1..311 | 1..311 | 1665 | 99 | Plus |
Dsim\GD10180-PA | 412 | GD10180-PA | 67..277 | 2..210 | 160 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22685-PA | 311 | GJ22685-PA | 1..311 | 1..311 | 1535 | 91 | Plus |
Dvir\GJ20218-PA | 389 | GJ20218-PA | 40..250 | 2..210 | 176 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25677-PA | 306 | GK25677-PA | 1..305 | 1..308 | 1511 | 92.2 | Plus |
Dwil\GK23039-PA | 369 | GK23039-PA | 36..246 | 2..210 | 169 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24810-PA | 311 | GE24810-PA | 1..311 | 1..311 | 1659 | 98.7 | Plus |
Translation from 70 to 1005
> GH04846.hyp MKKKVLLMGKSGSGKTSMRSIIFANYIARDTTRLGATIDVEHSHVRFLGN LVLNLWDCGGQEGFMKQYFAQQRDNIFRNVEVLIYVFDVESQEIERDIHY YQSCLEALLQNSPEAKIFCLVHKMDLVPEGLRESVFTERMEDLIKLSKPG NVTCFRTSIWDETLYKAWSSIVTMLIPNVAALENSVTHFGNVIEADEVLL FEKATFLVISHCQSKKNRDSHRFEKVSNIIKQFKLSCSKLGAKFQSMEVR NSAFAAFIDTFTSNTYVMVVMSDPTLPSEATLVNIRNARKYFEELENPSN SAINHHGQRYH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RagA-B-PA | 311 | CG11968-PA | 1..311 | 1..311 | 1607 | 100 | Plus |