BDGP Sequence Production Resources |
Search the DGRC for GH04962
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 49 |
Well: | 62 |
Vector: | pOT2 |
Associated Gene/Transcript | CG14476-RA |
Protein status: | GH04962.pep: gold |
Preliminary Size: | 3899 |
Sequenced Size: | 3174 |
Gene | Date | Evidence |
---|---|---|
CG14476 | 2000-02-14 | Blastp of sequenced clone |
CG14476 | 2001-01-01 | Release 2 assignment |
CG14476 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14476 | 2008-04-29 | Release 5.5 accounting |
CG14476 | 2008-08-15 | Release 5.9 accounting |
CG14476 | 2008-12-18 | 5.12 accounting |
3174 bp (3174 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145625
> GH04962.complete GGCACGAGCAACCGGAGGTGAGCTGTTTGAAACTTAAAGGTTTGGAGTCC CACGAAGACTTAAAAACGACCAACGCTATACTGGATCCGCGGATCTCCCA AAAGTGAAGCAGCTTTGAAACACGGGACAAGCCGCCATGCGATTCGCTCT GGCCACCGTGGCCATCATCTGGGCTTTATTCGTCCTGGCCGACGGAGTGG ACCCCGGGAACTTTAAGACCTGCGAGCAGAGCAGTTTTTGTCGACGCTCC CGAAAGATTCAGGGATCGGGCAGCAAGTACGCCTTAATTCCCGGCACCTT GAACACCTATGCGGATTCGTTGACCGCTGATCTCGTTAACAAGGAAAACC ATCACCAGTTTGCCTTTAAGCTAGAGGCTCTGGTGGGCAGTACCTTCCGC CTGCAGATCGATGAAAAGCAGCCACTTCGGCCACGATATCGCGTCGAGCA CGCTCTGAAGGGCCCAACCCAGGCCGGACGCATTCGTGTCCAGCGGGAAA CAGATGGAGAGATCGTTATCACATCGGAGAAGAACAAGGCTGTGATCCAC GGAGACCCGTTCCGCATCGATTTCTTCGAGAACGACGTGCTGGTGGTCTC GGTGAATGCCAAGAACTGGTTGTACTTTGAGCATCTGCGGCAGAAGGCCC AGGAACCGACCTCCCACCCGGCGGAAAACGAGAATCAGCAGGAGCAGGAT GCCGCTGTCGAAACTCCTAAAGCAGCAGATACTATCGATGATCCTGGTGC ATGGGAGGAGAACTTCAAATCACACCACGACTCTAAGCCCTACGGTCCGG AAGCTGTGGCTCTGGACTTTTCGTTCCCCGCAGCCAAAGTTCTATTCGGT ATTCCAGAGCACGCCGACAGCTTCATACTAAAGTCCACCTCGGGTACGGA TCCTTACCGCCTGTACAACCTGGATGTGTTCGAATACGTTGTGGACAGCA AGATGGCCCTGTACGGCTCAGTGCCGGTAATCTATGGTCATGGAGCGCAA CGCACAGCGGGCGTTTACTGGCAGAATGCCGCTGAAACTTGGGTGGACAT TCAAACGTCGGAGACCAATGTTGTATCTTCGCTGGTAAATTTTGTATCCG GCTCGCAGAAGACTCCTCCTCCGGCTGCCCACTTTATGTCGGAGTCGGGC ATCGTGGACGCCTTCATCATGTTGGGACCCAAGCCCATGGACACTTTTAA GCAGTACGCGGCTCTGACTGGAACACACGAGTTACCTCAGTTATTTGCTC TGGCCTACCACCAGAGCCGCTGGAACTACAACGACGAGAGGGACGTGACC TCCGTGTCAGCGAAATTCGACGAGTACAATATACCCATGGACACCATGTG GCTGGACATCGAGCATACAGATGGCAAGCGCTACTTCACCTGGGACAAGT TCAAGTTCCCGCACCCGCTGGCAATGATCAAGAATCTTACAGAACTGGGT CGCCACTTGGTGGTGATAGTCGACCCGCACATCAAGCGGGATAATAATTA CTTCTTCCACCGCGACTGCACGGATCGTGGTTATTATGTGAAAACGCGCG AGGGCAATGATTACGAGGGCTGGTGTTGGCCGGGAGCGGCTAGTTATCCT GATTTCTTTAACCCCGTGGTCAGAGAGTACTACGCCAGCCAGTACGCGCT GGACAAGTTCCAAACGGTCACCGCAGATGTGATGTTGTGGAACGACATGA ACGAGCCATCGGTGTTCAACGGCCCTGAGATCACGGCGCCCAAGGACTTG ATCCACTACGGCAACTGGGAGCACCGTGACGTGCACAATTTGTACGGTCA CATGCACTTGATGGGGTCCTTCGCGGGCCTGCAGCAGCGCGATCCCAACC AGCGGCCCTTCATCCTCACACGCGCCCACTTTGCTGGTTCCCAGCGTTAT GCTGCCATTTGGACGGGTGACAACTTTGCGGACTGGTCGCATCTACAGCA CTCAGTCAAAATGTGTCTCACGGAGGCGGTGGCCGGCTTCTCCTTCTGCG GTGCCGATGTCGGTGCCTTCTTTGGAAACCCAGATACTGAGCTGCTGGAG CGCTGGTATCAAACCGGTGCCTTCCTGCCCTTTTTCCGGGCTCATGCACA CATCGACACTAAGCGCCGGGAGCCATGGCTTTTCCCAGAACGCACTCGCC AGGTTATCCAAAATGCTGTGATCAAGCGTTATTCATATCTGCCCCTGTGG TACACCGCATTCTACGAGCTGGAGCTGACTGGCGAGCCGGTAATTCGCCC ATTATTAGCCCAATATCCACTGGATAAGGAGGCCTTCGGCGTTGACAACC AGCTGTTGGTGCAAGATCGCCTGCTTGTGAGACCCGTCATGCAGCAGGGC GTCAGCAAGGTGGACGTGTACTTCCCGGCAATTGACGACAAAAAGAATGG CGACTGGTGGTACGATGTGGATACTTACCAGCGCCAGGAACGATCCGGCT ATGTGTCGGTTCCAGTAGATGATTTCAAGATCCCCGTTTGGCAGCGTGGT GGCAGCATTGTACCGAAGAAGGAGCGACAGCGCCGCGCCTCAACCTTGAT GTTGCACGATCCGTACACACTGATAATCTGCTTAGACCGTCAGGGCAAGG CATCCGGTTCCCTCTACCTAGACGACGAGAAGTCCTACGCTTACCGCCAG GGCCAGCGCATCCACGTGAACTACGAGTTCGCCCACGACCAGCTGGTCAA TAGCTTCGTGGGCAAGCCCAAGTACAAGACCCTTGCCTGGATCGAGCGAA TCGTGATCGCCGGACTTGAGAAGGTGCCCAGCAGCGCCAGCATCACGGTG AATGGTGTCAGCCAGCAGCTGGAGGTGCTCCATCATGATAACACCGTCGT CGTGCGCAAGCCGGGCGTCAAGATGGACGTCGACTTCGCCATTAAACTCA ACTTTGCGTAGTCTGTAGTCGCAACGTGCGCCGTGTATTATTGTTCTCAT AAATATTTTAATTGTGTGCACCCTAAAAATTGCTATTAAATGTTTTAAGC CTCCTATTCCAGGCAAACCCAAATAATAGATTCCCTAACTACCTTCGATT AGTATCCCCCGTTCCTTCTCTGCAATTCCATCAATTCAACATTCGGAGAG TGTAACTCAAGTTGAACGCAATTTATGTTTCAATAAATATAAAAACTTCT CTGTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14476-RA | 3146 | CG14476-RA | 1..3146 | 9..3154 | 15730 | 100 | Plus |
CG14476-RB | 3173 | CG14476-RB | 115..3156 | 114..3155 | 15210 | 100 | Plus |
CG14476-RC | 3089 | CG14476-RC | 49..3089 | 114..3154 | 15205 | 100 | Plus |
CG14476-RC | 3089 | CG14476-RC | 18..48 | 9..39 | 155 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 21466502..21467988 | 2479..993 | 7435 | 100 | Minus |
chrX | 22417052 | chrX | 21468139..21468889 | 993..243 | 3755 | 100 | Minus |
chrX | 22417052 | chrX | 21465758..21466434 | 3154..2478 | 3385 | 100 | Minus |
chrX | 22417052 | chrX | 21469621..21469750 | 243..114 | 650 | 100 | Minus |
chrX | 22417052 | chrX | 21470236..21470340 | 113..9 | 525 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 21601344..21602830 | 2479..993 | 7435 | 100 | Minus |
X | 23542271 | X | 21602981..21603731 | 993..243 | 3755 | 100 | Minus |
X | 23542271 | X | 21600599..21601276 | 3155..2478 | 3390 | 100 | Minus |
X | 23542271 | X | 21604463..21604592 | 243..114 | 650 | 100 | Minus |
X | 23542271 | X | 21605078..21605182 | 113..9 | 525 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 21586436..21587922 | 2479..993 | 7435 | 100 | Minus |
X | 23527363 | X | 21588073..21588823 | 993..243 | 3755 | 100 | Minus |
X | 23527363 | X | 21585691..21586368 | 3155..2478 | 3390 | 100 | Minus |
X | 23527363 | X | 21589555..21589684 | 243..114 | 650 | 100 | Minus |
X | 23527363 | X | 21590170..21590274 | 113..9 | 525 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9009..9060 | 2897..2843 | 124 | 75 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 21465758..21466432 | 2480..3154 | 100 | <- | Minus |
chrX | 21466502..21467987 | 994..2479 | 100 | <- | Minus |
chrX | 21468139..21468888 | 244..993 | 100 | <- | Minus |
chrX | 21469621..21469750 | 114..243 | 100 | <- | Minus |
chrX | 21470236..21470347 | 3..113 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14476-RD | 1..2775 | 137..2911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14476-RD | 1..2775 | 137..2911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14476-RD | 1..2775 | 137..2911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14476-RD | 1..2775 | 137..2911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14476-RD | 1..2775 | 137..2911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14476-RA | 1..3146 | 9..3154 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14476-RA | 1..3146 | 9..3154 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14476-RA | 1..3146 | 9..3154 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14476-RA | 1..3144 | 9..3152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14476-RA | 76..3228 | 3..3154 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21605078..21605189 | 3..113 | 96 | Minus | |
X | 21600600..21601274 | 2480..3154 | 100 | <- | Minus |
X | 21601344..21602829 | 994..2479 | 100 | <- | Minus |
X | 21602981..21603730 | 244..993 | 100 | <- | Minus |
X | 21604463..21604592 | 114..243 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21605078..21605189 | 3..113 | 96 | Minus | |
X | 21600600..21601274 | 2480..3154 | 100 | <- | Minus |
X | 21601344..21602829 | 994..2479 | 100 | <- | Minus |
X | 21602981..21603730 | 244..993 | 100 | <- | Minus |
X | 21604463..21604592 | 114..243 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21605078..21605189 | 3..113 | 96 | Minus | |
X | 21600600..21601274 | 2480..3154 | 100 | <- | Minus |
X | 21601344..21602829 | 994..2479 | 100 | <- | Minus |
X | 21602981..21603730 | 244..993 | 100 | <- | Minus |
X | 21604463..21604592 | 114..243 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 21471627..21472301 | 2480..3154 | 100 | <- | Minus |
arm_X | 21472371..21473856 | 994..2479 | 100 | <- | Minus |
arm_X | 21474008..21474757 | 244..993 | 100 | <- | Minus |
arm_X | 21475490..21475619 | 114..243 | 100 | <- | Minus |
arm_X | 21476105..21476216 | 3..113 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21585692..21586366 | 2480..3154 | 100 | <- | Minus |
X | 21586436..21587921 | 994..2479 | 100 | <- | Minus |
X | 21588073..21588822 | 244..993 | 100 | <- | Minus |
X | 21589555..21589684 | 114..243 | 100 | <- | Minus |
X | 21590170..21590281 | 3..113 | 96 | Minus |
Translation from 136 to 2910
> GH04962.pep MRFALATVAIIWALFVLADGVDPGNFKTCEQSSFCRRSRKIQGSGSKYAL IPGTLNTYADSLTADLVNKENHHQFAFKLEALVGSTFRLQIDEKQPLRPR YRVEHALKGPTQAGRIRVQRETDGEIVITSEKNKAVIHGDPFRIDFFEND VLVVSVNAKNWLYFEHLRQKAQEPTSHPAENENQQEQDAAVETPKAADTI DDPGAWEENFKSHHDSKPYGPEAVALDFSFPAAKVLFGIPEHADSFILKS TSGTDPYRLYNLDVFEYVVDSKMALYGSVPVIYGHGAQRTAGVYWQNAAE TWVDIQTSETNVVSSLVNFVSGSQKTPPPAAHFMSESGIVDAFIMLGPKP MDTFKQYAALTGTHELPQLFALAYHQSRWNYNDERDVTSVSAKFDEYNIP MDTMWLDIEHTDGKRYFTWDKFKFPHPLAMIKNLTELGRHLVVIVDPHIK RDNNYFFHRDCTDRGYYVKTREGNDYEGWCWPGAASYPDFFNPVVREYYA SQYALDKFQTVTADVMLWNDMNEPSVFNGPEITAPKDLIHYGNWEHRDVH NLYGHMHLMGSFAGLQQRDPNQRPFILTRAHFAGSQRYAAIWTGDNFADW SHLQHSVKMCLTEAVAGFSFCGADVGAFFGNPDTELLERWYQTGAFLPFF RAHAHIDTKRREPWLFPERTRQVIQNAVIKRYSYLPLWYTAFYELELTGE PVIRPLLAQYPLDKEAFGVDNQLLVQDRLLVRPVMQQGVSKVDVYFPAID DKKNGDWWYDVDTYQRQERSGYVSVPVDDFKIPVWQRGGSIVPKKERQRR ASTLMLHDPYTLIICLDRQGKASGSLYLDDEKSYAYRQGQRIHVNYEFAH DQLVNSFVGKPKYKTLAWIERIVIAGLEKVPSSASITVNGVSQQLEVLHH DNTVVVRKPGVKMDVDFAIKLNFA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21346-PA | 788 | GF21346-PA | 153..788 | 288..923 | 3196 | 89.6 | Plus |
Dana\GF21346-PA | 788 | GF21346-PA | 1..138 | 1..137 | 591 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17528-PA | 924 | GG17528-PA | 1..924 | 1..924 | 4800 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24870-PA | 923 | GH24870-PA | 1..922 | 1..922 | 4126 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GCS2alpha-PC | 924 | CG14476-PC | 1..924 | 1..924 | 4967 | 100 | Plus |
GCS2alpha-PE | 924 | CG14476-PE | 1..924 | 1..924 | 4967 | 100 | Plus |
GCS2alpha-PD | 924 | CG14476-PD | 1..924 | 1..924 | 4967 | 100 | Plus |
GCS2alpha-PA | 924 | CG14476-PA | 1..924 | 1..924 | 4967 | 100 | Plus |
GCS2alpha-PB | 924 | CG14476-PB | 1..924 | 1..924 | 4967 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14701-PA | 927 | GI14701-PA | 1..927 | 1..924 | 4108 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13435-PA | 589 | GL13435-PA | 9..588 | 344..923 | 2754 | 84.5 | Plus |
Dper\GL13434-PA | 231 | GL13434-PA | 18..210 | 18..212 | 827 | 77.9 | Plus |
Dper\GL12508-PA | 658 | GL12508-PA | 294..628 | 406..756 | 167 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13011-PA | 922 | GA13011-PA | 1..921 | 1..923 | 4307 | 84.5 | Plus |
Dpse\GA11275-PA | 658 | GA11275-PA | 294..628 | 406..756 | 169 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22613-PA | 645 | GM22613-PA | 2..645 | 281..924 | 3440 | 97.8 | Plus |
Dsec\GM22612-PA | 285 | GM22612-PA | 1..273 | 1..273 | 1401 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10555-PA | 254 | GD10555-PA | 4..254 | 36..286 | 1303 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16765-PA | 916 | GJ16765-PA | 1..885 | 1..883 | 4059 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25479-PA | 934 | GK25479-PA | 1..934 | 1..923 | 4168 | 80.8 | Plus |
Dwil\GK14321-PA | 661 | GK14321-PA | 306..620 | 417..747 | 170 | 22.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15288-PA | 924 | GE15288-PA | 1..924 | 1..924 | 4849 | 96.5 | Plus |
Translation from 136 to 2910
> GH04962.hyp MRFALATVAIIWALFVLADGVDPGNFKTCEQSSFCRRSRKIQGSGSKYAL IPGTLNTYADSLTADLVNKENHHQFAFKLEALVGSTFRLQIDEKQPLRPR YRVEHALKGPTQAGRIRVQRETDGEIVITSEKNKAVIHGDPFRIDFFEND VLVVSVNAKNWLYFEHLRQKAQEPTSHPAENENQQEQDAAVETPKAADTI DDPGAWEENFKSHHDSKPYGPEAVALDFSFPAAKVLFGIPEHADSFILKS TSGTDPYRLYNLDVFEYVVDSKMALYGSVPVIYGHGAQRTAGVYWQNAAE TWVDIQTSETNVVSSLVNFVSGSQKTPPPAAHFMSESGIVDAFIMLGPKP MDTFKQYAALTGTHELPQLFALAYHQSRWNYNDERDVTSVSAKFDEYNIP MDTMWLDIEHTDGKRYFTWDKFKFPHPLAMIKNLTELGRHLVVIVDPHIK RDNNYFFHRDCTDRGYYVKTREGNDYEGWCWPGAASYPDFFNPVVREYYA SQYALDKFQTVTADVMLWNDMNEPSVFNGPEITAPKDLIHYGNWEHRDVH NLYGHMHLMGSFAGLQQRDPNQRPFILTRAHFAGSQRYAAIWTGDNFADW SHLQHSVKMCLTEAVAGFSFCGADVGAFFGNPDTELLERWYQTGAFLPFF RAHAHIDTKRREPWLFPERTRQVIQNAVIKRYSYLPLWYTAFYELELTGE PVIRPLLAQYPLDKEAFGVDNQLLVQDRLLVRPVMQQGVSKVDVYFPAID DKKNGDWWYDVDTYQRQERSGYVSVPVDDFKIPVWQRGGSIVPKKERQRR ASTLMLHDPYTLIICLDRQGKASGSLYLDDEKSYAYRQGQRIHVNYEFAH DQLVNSFVGKPKYKTLAWIERIVIAGLEKVPSSASITVNGVSQQLEVLHH DNTVVVRKPGVKMDVDFAIKLNFA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14476-PC | 924 | CG14476-PC | 1..924 | 1..924 | 4967 | 100 | Plus |
CG14476-PE | 924 | CG14476-PE | 1..924 | 1..924 | 4967 | 100 | Plus |
CG14476-PD | 924 | CG14476-PD | 1..924 | 1..924 | 4967 | 100 | Plus |
CG14476-PA | 924 | CG14476-PA | 1..924 | 1..924 | 4967 | 100 | Plus |
CG14476-PB | 924 | CG14476-PB | 1..924 | 1..924 | 4967 | 100 | Plus |