Clone GH05039 Report

Search the DGRC for GH05039

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:50
Well:39
Vector:pOT2
Associated Gene/Transcriptflw-RA
Protein status:GH05039.pep: gold
Preliminary Size:2994
Sequenced Size:2727

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2096 2001-11-29 Blastp of sequenced clone
flw 2008-04-29 Release 5.5 accounting
flw 2008-08-15 Release 5.9 accounting
Hsromega 2008-08-15 Release 5.9 accounting
flw 2008-12-18 5.12 accounting
Hsromega 2008-12-18 5.12 accounting

Clone Sequence Records

GH05039.complete Sequence

2727 bp (2727 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069047

> GH05039.complete
AAAAGGCTTATCCTCTTGGTAAAATACACTTAAAATCCATATAGGTAGGG
TGTGATATAAAACGTTCCCAATTCAAAATCGCGTCACATAATAAACAAAG
AGTTAAAGCATCTTAAAAGGACTGATATATAGGACATATTAATTTACTTA
ATAGGTAGGAATTGAACACACGCTATTTTTATATGGTATATCTTAACGCT
AGCTGTCCGACGAGTTTTGTTATTGGCGGAGAAAAGATTACGCTGGTTTA
TAAATTCTCAGTTAAGCCGATTTCTCAGCTCCTCTCCCCCTGCAGAGATC
TAACACATCTATATAGATATATATATTTTATATATTCCTTGATCGATTTG
CGATCCCGAAAGTCGATCAGCCGTGCGTCTATATATTTTTTTTTCTGTTC
TTGCCCCTCGTGCAACATCAGTGAACATCAGCGGCCCACCGTACAAAATC
TCAATAAGAAAAAAAGAGAGCATAAAGTGAAATTGCCTTTTGCGGCAAGT
AAGAAAACGACCAAAAAAGAGAAAAGAATATAACGACTATTTGAATTAAA
CAAAGTTTATTGTTTACAATAGCATACAATACAAGTTTATAAGCTAACGG
GCGTCGCTGTGCGTGTGTGTGTGCTTGTGTGTGCGTGCGTGTAGTTGTTG
CGCCAAAAATTCCAATCGGAATTCTGGAACAGCTGGCCACAACAACAAAA
CGCGGCCAATAGAAGAACAATTTAGCTGCTGAAAAATGGGCGACTTCGAT
CTGAATGTGGACAGCTTGATACAGCGGCTGCTGGAGAACTTTAAAAAACA
AAAAGAGGCCGAAGAGCACGCCCAGAAGCTGCTAATCGCTCAACAATTGG
CCGCCGCCGGCGGAGCATCCGGCGCATCTGCCACATCGCCCACATCCAGC
AGCAATTACTCGTCGATGGCGGCGGTGGCCTCCTTTGGATCCGGATACGG
ATCGGGATCTGGTGCTGGTGCTCCTGGTGCCGGCGCTGGCCCAGGATCCA
GCCATGATCCGCTCGACGATCTCACCGAACAGCAGCGCCGTCTGCTCCAG
CAATACTCGATATCGCCGCCCAGCGAGACGATGATATCGGCCGATGGCGA
CCAGATCACCGTCCATCATCCGCGCGAGGAGCCCAAGAAATCCAGATTGA
AACTGCGCGATTTTTTCGTCGCCGAGTTTGTGCGCAGCTGCCGAACGGGC
AAACAGGTCCAGATGACGGAGGCGGAGGTGCGTGGCCTCTGTCTCAAGTC
GCGCGAGATCTTCTTGCAACAGCCCATCCTGCTGGAACTGGAGGCACCGC
TGATCATCTGCGGCGACATCCACGGCCAGTACACAGACCTGTTGCGCCTG
TTCGAGTACGGCGGATTCCCTCCGGCTGCCAACTACTTGTTCCTCGGCGA
CTACGTCGATCGGGGCAAGCAGTCCCTGGAGACCATCTGTCTGCTGCTGG
CCTACAAGATCAAATATCCGGAGAACTTCTTCTTGTTGCGCGGCAACCAC
GAGTGCGCCAGTATTAATAGGATTTACGGCTTCTACGATGAGTGCAAGCG
CCGATACAATGTCAAACTGTGGAAGACTTTCACAGATTGCTTCAACTGTC
TGCCGGTAGCCGCCATTATTGACGAAAAGATCTTCTGCTGCCACGGCGGC
CTCAGTCCCGATCTTCAGGGCATGGAGCAGATCCGTCGCCTAATGCGACC
CACAGATGTGCCGGATACCGGGTTACTGTGCGATCTTCTGTGGAGTGATC
CCGACAAGGATGTTCAGGGTTGGGGCGAGAATGATCGCGGTGTGAGCTTC
ACCTTCGGTGTGGATGTGGTCTCCAAGTTTTTGAACCGCCACGAGCTGGA
CTTGATCTGCCGTGCACATCAGGTTGTGGAGGATGGCTATGAGTTCTTTG
CGCGTCGGCAACTGGTCACGTTGTTCTCGGCGCCCAATTACTGTGGAGAG
TTCGACAATGCCGGCGGAATGATGACCGTGGACGACACGCTGATGTGCTC
ATTCCAGATCCTGAAACCATCCGAGAAGAAGGCCAAGTATCTGTACAGCG
GAATGAACTCGTCGCGACCCACAACACCGCAGCGCAGCGCCCCAATGCTT
GCGACCAACAAGAAGAAATAATATATCCATCCGCTTCCATTTCCTTAAAG
GTTCAACAAACAACAGAAATAAACTTTTACATAGATACACACATATATAC
ATATAAATATAACGAAACGATAGAAAAGGAGAGCGTTAGGCGATAGTAGA
GAAAGGGCAAATGATAAATTAAATGTGTGAGCTATTAAAGCAAGCAAAAT
CGAAGTGCATGAATATCAACATCTATGTGAATCCGTCATTATCTGTTATC
TGATGTGTCATCTGTATCCAACTTGATTACCTTATCCGTGTACCTGCTAG
TTGCAGCAGCAACATCAGGAGCAACAACACCAGCAGCAGCAGCAGCAGAA
ACATCAGTGAAACACTCAGAGGCCCATAGTTAAGTCGATTCCTGCATTTG
ATGATTATCTGTTGAATGGAAATTGTGACAACGTCCCCGTAACAGCAGCT
CCCAGATCCAAAACTCCCGAAACATGCAGATAAATAAATACATTAAAAGT
ACAGCGATGTTAAGCAATGAATTTATATATAGGCTTATTAATGTAAACTA
TATACTATATACTTATATATTCATAACTACAAAAGAGAAACGAAAACAAA
CCTAAACAAAAAAAAAAAAAAAAAAAA

GH05039.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:45:53
Subject Length Description Subject Range Query Range Score Percent Strand
flw.g 2854 flw.g 43..2572 198..2727 12650 100 Plus
flw.f 3419 flw.f 43..2572 198..2727 12650 100 Plus
flw-RA 2591 flw-RA 43..2572 198..2727 12650 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:10:41
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 10298844..10299548 2005..2707 3460 99.7 Plus
chrX 22417052 chrX 10277474..10278062 198..787 2900 99.8 Plus
chrX 22417052 chrX 10279940..10280332 788..1180 1935 99.5 Plus
chrX 22417052 chrX 10297833..10298182 1180..1529 1750 100 Plus
chr3R 27901430 chr3R 8250180..8250962 2028..1246 1725 81.4 Minus
chrX 22417052 chrX 10298242..10298588 1528..1874 1720 99.7 Plus
chrX 22417052 chrX 15249377..15250195 2028..1210 1350 77.7 Minus
chr3R 27901430 chr3R 17124401..17124597 1..197 985 100 Plus
chr3R 27901430 chr3R 17125233..17125429 1..197 985 100 Plus
chrU 10048995 chrU 8055251..8055447 1..197 985 100 Plus
chr3R 27901430 chr3R 17125789..17125985 1..197 970 99.5 Plus
chrU 10048995 chrU 8055807..8056003 1..197 970 99.5 Plus
chr3R 27901430 chr3R 17123845..17124041 1..197 955 99 Plus
chr3R 27901430 chr3R 17124679..17124875 1..197 955 99 Plus
chr3R 27901430 chr3R 17124955..17125151 1..197 940 98.5 Plus
chr3R 27901430 chr3R 17132069..17132265 1..197 940 98.5 Plus
chr3R 27901430 chr3R 17123567..17123763 1..197 925 98 Plus
chr3R 27901430 chr3R 17130679..17130875 1..197 925 98 Plus
chr3R 27901430 chr3R 17125511..17125707 1..197 910 97.5 Plus
chr3R 27901430 chr3R 17126429..17126625 1..197 910 97.5 Plus
chrU 10048995 chrU 7529573..7529769 197..1 910 97.5 Minus
chrU 10048995 chrU 8055529..8055725 1..197 910 97.5 Plus
chr3R 27901430 chr3R 17129567..17129763 1..197 895 97 Plus
chr3R 27901430 chr3R 17129845..17130041 1..197 895 97 Plus
chr3R 27901430 chr3R 17131513..17131709 1..197 880 96.4 Plus
chr3R 27901430 chr3R 17131791..17131987 1..197 880 96.4 Plus
chr3R 27901430 chr3R 17132626..17132822 1..197 880 96.4 Plus
chr3R 27901430 chr3R 17127814..17128010 1..197 865 95.9 Plus
chr3R 27901430 chr3R 17130957..17131153 1..197 865 95.9 Plus
chr3R 27901430 chr3R 17132904..17133100 1..197 865 95.9 Plus
chrU 10048995 chrU 7528742..7528938 197..1 865 95.9 Minus
chr3R 27901430 chr3R 17130123..17130319 1..197 850 95.4 Plus
chr3R 27901430 chr3R 17130407..17130597 7..197 850 96.3 Plus
chr3R 27901430 chr3R 17126064..17126260 1..197 820 94.4 Plus
chrU 10048995 chrU 7529938..7530134 197..1 820 94.4 Minus
chrU 10048995 chrU 8056082..8056278 1..197 820 94.4 Plus
chrU 10048995 chrU 7527831..7528017 186..1 810 96.8 Minus
chr3R 27901430 chr3R 17132348..17132544 1..197 790 93.4 Plus
chr3R 27901430 chr3R 17124129..17124319 7..197 775 93.7 Plus
chrU 10048995 chrU 7529020..7529216 197..1 775 92.9 Minus
chr3R 27901430 chr3R 17123202..17123398 1..197 760 92.4 Plus
chr3R 27901430 chr3R 17126982..17127178 1..197 760 92.4 Plus
chr3R 27901430 chr3R 17127536..17127732 1..197 760 92.4 Plus
chr3R 27901430 chr3R 17128457..17128653 1..197 760 92.4 Plus
chr3R 27901430 chr3R 17128735..17128931 1..197 760 92.4 Plus
chr3R 27901430 chr3R 17129289..17129485 1..197 760 92.4 Plus
chr3R 27901430 chr3R 17131235..17131431 1..197 760 92.4 Plus
chr3R 27901430 chr3R 17133460..17133656 1..197 760 92.4 Plus
chrU 10048995 chrU 7528099..7528295 197..1 760 92.4 Minus
chr3R 27901430 chr3R 20342170..20342464 1235..1529 755 83.7 Plus
chr3R 27901430 chr3R 17133188..17133378 7..197 745 92.7 Plus
chrU 10048995 chrU 8056726..8056922 1..197 745 91.9 Plus
chr3R 27901430 chr3R 17126704..17126900 1..197 730 91.4 Plus
chr3R 27901430 chr3R 17128179..17128375 1..197 730 91.4 Plus
chrU 10048995 chrU 7528377..7528573 197..1 730 91.4 Minus
chrU 10048995 chrU 7529298..7529494 197..1 730 91.4 Minus
chr3R 27901430 chr3R 17127260..17127454 1..197 725 92.4 Plus
chr3R 27901430 chr3R 17129013..17129207 1..197 725 92.4 Plus
chrX 22417052 chrX 10298645..10298781 1871..2007 670 99.3 Plus
chrU 10048995 chrU 8056447..8056644 1..197 670 90.4 Plus
chr3R 27901430 chr3R 20342869..20343140 1531..1802 535 79.8 Plus
chr2R 21145070 chr2R 13843163..13843542 1658..1279 415 73.9 Minus
chrU 10048995 chrU 8057004..8057074 1..71 325 97.2 Plus
chr3R 27901430 chr3R 20343245..20343354 1849..1958 280 83.6 Plus
chr2R 21145070 chr2R 17768264..17768433 1664..1495 265 77.1 Minus
chrYHet 347003 chrYHet 291547..291717 1858..2028 255 76.6 Plus
chr3R 27901430 chr3R 17123019..17123111 8..103 235 85.4 Plus
chr3R 27901430 chr3R 17133760..17133858 21..120 210 83 Plus
chr2L 23010047 chr2L 3110209..3110309 1861..1961 205 80.2 Plus
chr2R 21145070 chr2R 13842846..13842954 1975..1867 200 78.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
Hsromega-RB 14084 CR31400-RB 4806..5002 1..197 985 100 Plus
Hsromega-RB 14084 CR31400-RB 3974..4170 1..197 985 100 Plus
Hsromega-RB 14084 CR31400-RB 5362..5558 1..197 970 99.4 Plus
Hsromega-RB 14084 CR31400-RB 4252..4448 1..197 955 98.9 Plus
Hsromega-RB 14084 CR31400-RB 3418..3614 1..197 955 98.9 Plus
Hsromega-RB 14084 CR31400-RB 11642..11838 1..197 940 98.4 Plus
Hsromega-RB 14084 CR31400-RB 4528..4724 1..197 940 98.4 Plus
Hsromega-RB 14084 CR31400-RB 10252..10448 1..197 925 97.9 Plus
Hsromega-RB 14084 CR31400-RB 3140..3336 1..197 925 97.9 Plus
Hsromega-RB 14084 CR31400-RB 6002..6198 1..197 910 97.4 Plus
Hsromega-RB 14084 CR31400-RB 5084..5280 1..197 910 97.4 Plus
Hsromega-RB 14084 CR31400-RB 9140..9336 1..197 895 96.9 Plus
Hsromega-RB 14084 CR31400-RB 9418..9614 1..197 895 96.9 Plus
Hsromega-RB 14084 CR31400-RB 12199..12395 1..197 880 96.4 Plus
Hsromega-RB 14084 CR31400-RB 11364..11560 1..197 880 96.4 Plus
Hsromega-RB 14084 CR31400-RB 11086..11282 1..197 880 96.4 Plus
Hsromega-RB 14084 CR31400-RB 12477..12673 1..197 865 95.9 Plus
Hsromega-RB 14084 CR31400-RB 10530..10726 1..197 865 95.9 Plus
Hsromega-RB 14084 CR31400-RB 7387..7583 1..197 865 95.9 Plus
Hsromega-RB 14084 CR31400-RB 9980..10170 7..197 850 96.3 Plus
Hsromega-RB 14084 CR31400-RB 9696..9892 1..197 850 95.4 Plus
Hsromega-RB 14084 CR31400-RB 5637..5833 1..197 820 94.4 Plus
Hsromega-RB 14084 CR31400-RB 11921..12117 1..197 790 93.4 Plus
Hsromega-RB 14084 CR31400-RB 3702..3892 7..197 775 93.7 Plus
Hsromega-RB 14084 CR31400-RB 10808..11004 1..197 760 92.3 Plus
Hsromega-RB 14084 CR31400-RB 8862..9058 1..197 760 92.3 Plus
Hsromega-RB 14084 CR31400-RB 8308..8504 1..197 760 92.3 Plus
Hsromega-RB 14084 CR31400-RB 8030..8226 1..197 760 92.3 Plus
Hsromega-RB 14084 CR31400-RB 7109..7305 1..197 760 92.3 Plus
Hsromega-RB 14084 CR31400-RB 6555..6751 1..197 760 92.3 Plus
Hsromega-RB 14084 CR31400-RB 2775..2971 1..197 760 92.3 Plus
Hsromega-RB 14084 CR31400-RB 12761..12951 7..197 745 92.6 Plus
Hsromega-RB 14084 CR31400-RB 8586..8780 1..197 735 92.3 Plus
Hsromega-RB 14084 CR31400-RB 6833..7027 1..197 735 92.3 Plus
Hsromega-RB 14084 CR31400-RB 7752..7948 1..197 730 91.3 Plus
Hsromega-RB 14084 CR31400-RB 6277..6473 1..197 730 91.3 Plus
Hsromega-RB 14084 CR31400-RB 13033..13228 1..197 690 90.8 Plus
Hsromega-RB 14084 CR31400-RB 2592..2684 8..103 245 85.4 Plus
Hsromega-RB 14084 CR31400-RB 13332..13456 21..146 245 80.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10407363..10408085 2005..2727 3615 100 Plus
X 23542271 X 10385974..10386563 198..787 2950 100 Plus
X 23542271 X 10388443..10388835 788..1180 1965 100 Plus
X 23542271 X 10406352..10406701 1180..1529 1750 100 Plus
X 23542271 X 10406761..10407107 1528..1874 1735 100 Plus
3R 32079331 3R 12424792..12425574 2028..1246 1725 81.4 Minus
X 23542271 X 15359441..15360262 2028..1207 1395 78 Minus
3R 32079331 3R 21300596..21300792 1..197 985 100 Plus
3R 32079331 3R 21301428..21301624 1..197 985 100 Plus
U 3151297 U 2738391..2738587 1..197 985 100 Plus
3R 32079331 3R 21301984..21302180 1..197 970 99.5 Plus
U 3151297 U 2738947..2739143 1..197 970 99.5 Plus
3R 32079331 3R 21300040..21300236 1..197 955 99 Plus
3R 32079331 3R 21300874..21301070 1..197 955 99 Plus
3R 32079331 3R 21301150..21301346 1..197 940 98.5 Plus
3R 32079331 3R 21308264..21308460 1..197 940 98.5 Plus
3R 32079331 3R 21299762..21299958 1..197 925 98 Plus
3R 32079331 3R 21306874..21307070 1..197 925 98 Plus
3R 32079331 3R 21301706..21301902 1..197 910 97.5 Plus
3R 32079331 3R 21302624..21302820 1..197 910 97.5 Plus
U 3151297 U 2738669..2738865 1..197 910 97.5 Plus
U 3151297 U 2742100..2742296 197..1 910 97.5 Minus
3R 32079331 3R 21305762..21305958 1..197 895 97 Plus
3R 32079331 3R 21306040..21306236 1..197 895 97 Plus
3R 32079331 3R 21307708..21307904 1..197 880 96.4 Plus
3R 32079331 3R 21307986..21308182 1..197 880 96.4 Plus
3R 32079331 3R 21308821..21309017 1..197 880 96.4 Plus
3R 32079331 3R 21309099..21309295 1..197 865 95.9 Plus
3R 32079331 3R 21307152..21307348 1..197 865 95.9 Plus
3R 32079331 3R 21304009..21304205 1..197 865 95.9 Plus
U 3151297 U 2741269..2741465 197..1 865 95.9 Minus
3R 32079331 3R 21306318..21306514 1..197 850 95.4 Plus
3R 32079331 3R 21306602..21306792 7..197 850 96.3 Plus
3R 32079331 3R 21302259..21302455 1..197 820 94.4 Plus
U 3151297 U 2739222..2739418 1..197 820 94.4 Plus
U 3151297 U 2742465..2742661 197..1 820 94.4 Minus
U 3151297 U 2740358..2740544 186..1 810 96.8 Minus
3R 32079331 3R 21308543..21308739 1..197 790 93.4 Plus
3R 32079331 3R 21300324..21300514 7..197 775 93.7 Plus
U 3151297 U 2741547..2741743 197..1 775 92.9 Minus
3R 32079331 3R 21299397..21299593 1..197 760 92.4 Plus
3R 32079331 3R 21303177..21303373 1..197 760 92.4 Plus
3R 32079331 3R 21303731..21303927 1..197 760 92.4 Plus
3R 32079331 3R 21304652..21304848 1..197 760 92.4 Plus
3R 32079331 3R 21304930..21305126 1..197 760 92.4 Plus
3R 32079331 3R 21305484..21305680 1..197 760 92.4 Plus
3R 32079331 3R 21307430..21307626 1..197 760 92.4 Plus
U 3151297 U 2740626..2740822 197..1 760 92.4 Minus
3R 32079331 3R 24518898..24519192 1235..1529 755 83.7 Plus
3R 32079331 3R 21309383..21309573 7..197 745 92.7 Plus
U 3151297 U 2739866..2740062 1..197 745 91.9 Plus
3R 32079331 3R 21302899..21303095 1..197 730 91.4 Plus
3R 32079331 3R 21304374..21304570 1..197 730 91.4 Plus
U 3151297 U 2740904..2741100 197..1 730 91.4 Minus
U 3151297 U 2741825..2742021 197..1 730 91.4 Minus
3R 32079331 3R 21303455..21303649 1..197 725 92.4 Plus
3R 32079331 3R 21305208..21305402 1..197 725 92.4 Plus
X 23542271 X 10407164..10407300 1871..2007 685 100 Plus
3R 32079331 3R 21309655..21309850 1..197 680 90.9 Plus
U 3151297 U 2739587..2739784 1..197 670 90.4 Plus
3R 32079331 3R 24519597..24519868 1531..1802 535 79.8 Plus
2R 25286936 2R 17955968..17956347 1658..1279 415 73.9 Minus
U 3151297 U 2740144..2740214 1..71 325 97.2 Plus
Y 3667352 Y 3540059..3540414 1661..1306 280 71.9 Minus
2R 25286936 2R 21881871..21882040 1664..1495 265 77.1 Minus
Y 3667352 Y 3539692..3539862 2028..1858 255 76.6 Minus
3R 32079331 3R 21299214..21299306 8..103 235 85.4 Plus
3R 32079331 3R 21309954..21310078 21..146 235 81 Plus
3R 32079331 3R 24519973..24520082 1849..1958 235 80.9 Plus
2L 23513712 2L 3110521..3110621 1861..1961 205 80.2 Plus
2R 25286936 2R 17955651..17955759 1975..1867 200 78.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:06:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 10415461..10416183 2005..2727 3615 100 Plus
X 23527363 X 10394072..10394661 198..787 2950 100 Plus
X 23527363 X 10396541..10396933 788..1180 1965 100 Plus
X 23527363 X 10414450..10414799 1180..1529 1750 100 Plus
X 23527363 X 10414859..10415205 1528..1874 1735 100 Plus
3R 31820162 3R 12165989..12166405 1662..1246 1110 84.4 Minus
X 23527363 X 15367902..15368360 1665..1207 1035 81.6 Minus
3R 31820162 3R 21042259..21042455 1..197 985 100 Plus
3R 31820162 3R 21041427..21041623 1..197 985 100 Plus
3R 31820162 3R 21042815..21043011 1..197 970 99.4 Plus
3R 31820162 3R 21040871..21041067 1..197 955 98.9 Plus
3R 31820162 3R 21041705..21041901 1..197 955 98.9 Plus
3R 31820162 3R 21049095..21049291 1..197 940 98.4 Plus
3R 31820162 3R 21041981..21042177 1..197 940 98.4 Plus
3R 31820162 3R 21047705..21047901 1..197 925 97.9 Plus
3R 31820162 3R 21040593..21040789 1..197 925 97.9 Plus
3R 31820162 3R 21043455..21043651 1..197 910 97.4 Plus
3R 31820162 3R 21042537..21042733 1..197 910 97.4 Plus
3R 31820162 3R 21046871..21047067 1..197 895 96.9 Plus
3R 31820162 3R 21046593..21046789 1..197 895 96.9 Plus
3R 31820162 3R 21049652..21049848 1..197 880 96.4 Plus
3R 31820162 3R 21048817..21049013 1..197 880 96.4 Plus
3R 31820162 3R 21048539..21048735 1..197 880 96.4 Plus
3R 31820162 3R 21049930..21050126 1..197 865 95.9 Plus
3R 31820162 3R 21047983..21048179 1..197 865 95.9 Plus
3R 31820162 3R 21044840..21045036 1..197 865 95.9 Plus
3R 31820162 3R 21047433..21047623 7..197 850 96.3 Plus
3R 31820162 3R 21047149..21047345 1..197 850 95.4 Plus
3R 31820162 3R 21043090..21043286 1..197 820 94.4 Plus
3R 31820162 3R 21049374..21049570 1..197 790 93.4 Plus
3R 31820162 3R 21041155..21041345 7..197 775 93.7 Plus
3R 31820162 3R 21048261..21048457 1..197 760 92.3 Plus
3R 31820162 3R 21046315..21046511 1..197 760 92.3 Plus
3R 31820162 3R 21045761..21045957 1..197 760 92.3 Plus
3R 31820162 3R 21045483..21045679 1..197 760 92.3 Plus
3R 31820162 3R 21044562..21044758 1..197 760 92.3 Plus
3R 31820162 3R 21044008..21044204 1..197 760 92.3 Plus
3R 31820162 3R 21040228..21040424 1..197 760 92.3 Plus
3R 31820162 3R 24259729..24260023 1235..1529 755 83.7 Plus
3R 31820162 3R 21050214..21050404 7..197 745 92.6 Plus
3R 31820162 3R 21046039..21046233 1..197 735 92.3 Plus
3R 31820162 3R 21044286..21044480 1..197 735 92.3 Plus
3R 31820162 3R 21045205..21045401 1..197 730 91.3 Plus
3R 31820162 3R 21043730..21043926 1..197 730 91.3 Plus
3R 31820162 3R 21050486..21050681 1..197 690 90.8 Plus
X 23527363 X 10415262..10415398 1871..2007 685 100 Plus
3R 31820162 3R 24260428..24260699 1531..1802 535 79.7 Plus
2R 25260384 2R 17957212..17957447 1613..1378 370 77.1 Minus
3R 31820162 3R 12165623..12165739 2028..1912 360 87.1 Minus
X 23527363 X 15367539..15367727 2028..1840 345 78.8 Minus
3R 31820162 3R 12165750..12165925 1901..1726 310 78.4 Minus
2R 25260384 2R 21883070..21883239 1664..1495 265 77 Minus
3R 31820162 3R 21040045..21040137 8..103 245 85.4 Plus
3R 31820162 3R 21050785..21050909 21..146 245 80.9 Plus
Y 3410481 Y 3388494..3388746 1306..1558 245 73.1 Plus
3R 31820162 3R 24260804..24260913 1849..1958 235 80.9 Plus
2L 23513712 2L 3110521..3110621 1861..1961 205 80.1 Plus
2R 25260384 2R 17956850..17956958 1975..1867 200 78.8 Minus
Y 3410481 Y 3389046..3389089 1858..1901 175 93.1 Plus
3R 31820162 3R 24261179..24261238 1969..2028 165 85 Plus
2R 25260384 2R 21882760..21882864 1974..1870 165 77.1 Minus
X 23527363 X 15367807..15367895 1760..1672 145 77.5 Minus
Y 3410481 Y 3388798..3388849 1610..1661 140 84.6 Plus
Blast to na_te.dros performed 2019-03-15 19:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\BuT2 2775 Dbuz\BuT2 BUT2 2775bp 1291..1358 2161..2227 129 71 Plus
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 4060..4182 258..134 124 57.6 Minus

GH05039.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:11:20 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 10277467..10278062 188..787 93 -> Plus
chrX 10279940..10280332 788..1180 99 -> Plus
chrX 10297834..10298181 1181..1528 100 -> Plus
chrX 10298243..10298586 1529..1872 99 -> Plus
chrX 10298647..10298781 1873..2007 99 -> Plus
chrX 10298847..10299544 2008..2707 92   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:38:54 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
flw-RA 1..1386 736..2121 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:40:02 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
flw-RA 1..1386 736..2121 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:45:07 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
flw-RA 1..1386 736..2121 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:17:22 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
flw-RA 1..1386 736..2121 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:12:53 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
flw-RA 1..1386 736..2121 100   Plus
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:32:25 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
Hsromega-RB 3974..4176 1..203 98   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:38:54 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
flw-RA 35..2551 188..2707 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:40:01 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
flw-RA 35..2551 188..2707 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:45:07 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
flw-RA 8..2524 188..2707 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:17:22 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
flw-RA 35..2551 188..2707 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:12:53 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
flw-RA 8..2524 188..2707 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:11:20 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
X 10385974..10386563 198..787 100 -> Plus
X 10388443..10388835 788..1180 100 -> Plus
X 10406353..10406700 1181..1528 100 -> Plus
X 10406762..10407105 1529..1872 100 -> Plus
X 10407166..10407300 1873..2007 100 -> Plus
X 10407366..10408065 2008..2707 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:11:20 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
X 10385974..10386563 198..787 100 -> Plus
X 10388443..10388835 788..1180 100 -> Plus
X 10406353..10406700 1181..1528 100 -> Plus
X 10406762..10407105 1529..1872 100 -> Plus
X 10407166..10407300 1873..2007 100 -> Plus
X 10407366..10408065 2008..2707 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:11:20 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
X 10385974..10386563 198..787 100 -> Plus
X 10388443..10388835 788..1180 100 -> Plus
X 10406353..10406700 1181..1528 100 -> Plus
X 10406762..10407105 1529..1872 100 -> Plus
X 10407166..10407300 1873..2007 100 -> Plus
X 10407366..10408065 2008..2707 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:45:07 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10280007..10280596 198..787 100 -> Plus
arm_X 10282476..10282868 788..1180 100 -> Plus
arm_X 10300386..10300733 1181..1528 100 -> Plus
arm_X 10300795..10301138 1529..1872 100 -> Plus
arm_X 10301199..10301333 1873..2007 100 -> Plus
arm_X 10301399..10302098 2008..2707 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:53:00 Download gff for GH05039.complete
Subject Subject Range Query Range Percent Splice Strand
X 10414860..10415203 1529..1872 100 -> Plus
X 10394072..10394661 198..787 100 -> Plus
X 10396541..10396933 788..1180 100 -> Plus
X 10414451..10414798 1181..1528 100 -> Plus
X 10415264..10415398 1873..2007 100 -> Plus
X 10415464..10416163 2008..2707 100   Plus

GH05039.pep Sequence

Translation from 735 to 2120

> GH05039.pep
MGDFDLNVDSLIQRLLENFKKQKEAEEHAQKLLIAQQLAAAGGASGASAT
SPTSSSNYSSMAAVASFGSGYGSGSGAGAPGAGAGPGSSHDPLDDLTEQQ
RRLLQQYSISPPSETMISADGDQITVHHPREEPKKSRLKLRDFFVAEFVR
SCRTGKQVQMTEAEVRGLCLKSREIFLQQPILLELEAPLIICGDIHGQYT
DLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
LRGNHECASINRIYGFYDECKRRYNVKLWKTFTDCFNCLPVAAIIDEKIF
CCHGGLSPDLQGMEQIRRLMRPTDVPDTGLLCDLLWSDPDKDVQGWGEND
RGVSFTFGVDVVSKFLNRHELDLICRAHQVVEDGYEFFARRQLVTLFSAP
NYCGEFDNAGGMMTVDDTLMCSFQILKPSEKKAKYLYSGMNSSRPTTPQR
SAPMLATNKKK*

GH05039.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:12:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19336-PA 330 GF19336-PA 18..330 149..461 1705 99.7 Plus
Dana\GF20754-PA 327 GF20754-PA 17..327 149..461 1424 83.1 Plus
Dana\GF17044-PA 302 GF17044-PA 17..302 149..434 1398 87.1 Plus
Dana\GF21042-PA 302 GF21042-PA 17..302 149..434 1387 86.7 Plus
Dana\GF13214-PA 321 GF13214-PA 25..320 155..453 1054 61.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:12:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18356-PA 462 GG18356-PA 1..462 1..461 2425 97.6 Plus
Dere\GG11298-PA 327 GG11298-PA 17..327 149..461 1424 83.1 Plus
Dere\GG17127-PA 302 GG17127-PA 17..302 149..434 1393 87.1 Plus
Dere\GG12985-PA 313 GG12985-PA 25..303 153..431 1243 76.3 Plus
Dere\GG20728-PA 346 GG20728-PA 14..313 128..428 1053 59.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:12:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12016-PA 456 GH12016-PA 1..456 1..461 2176 90.3 Plus
Dgri\GH18826-PA 327 GH18826-PA 17..327 149..461 1427 83.1 Plus
Dgri\GH17464-PA 302 GH17464-PA 17..302 149..434 1401 87.1 Plus
Dgri\GH17947-PA 302 GH17947-PA 17..302 149..434 1387 86 Plus
Dgri\GH21132-PA 319 GH21132-PA 29..307 153..431 1219 73.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
flw-PA 461 CG2096-PA 1..461 1..461 2434 100 Plus
flw-PC 330 CG2096-PC 18..330 149..461 1684 99.7 Plus
flw-PB 330 CG2096-PB 18..330 149..461 1684 99.7 Plus
Pp1alpha-96A-PB 327 CG6593-PB 17..327 149..461 1409 83.1 Plus
Pp1alpha-96A-PA 327 CG6593-PA 17..327 149..461 1409 83.1 Plus
Pp1-87B-PA 302 CG5650-PA 17..302 149..434 1384 87.1 Plus
Pp1-13C-PA 302 CG9156-PA 17..302 149..434 1367 86.7 Plus
Pp1-Y2-PC 313 CG40448-PC 28..303 156..431 1231 76.8 Plus
PpN58A-PA 324 CG3245-PA 25..311 142..428 1047 63.1 Plus
PpY-55A-PB 314 CG10930-PB 21..297 155..431 1013 65.3 Plus
PpY-55A-PA 314 CG10930-PA 21..297 155..431 1013 65.3 Plus
PpD5-PA 346 CG10138-PA 18..313 134..428 1012 60.5 Plus
PpD6-PA 336 CG8822-PA 48..317 156..425 975 62.6 Plus
Pp1-Y1-PC 317 CG41534-PC 15..308 139..433 968 59 Plus
mts-PC 309 CG7109-PC 22..297 159..434 741 49.1 Plus
mts-PB 309 CG7109-PB 22..297 159..434 741 49.1 Plus
mts-PA 309 CG7109-PA 22..297 159..434 741 49.1 Plus
Pp4-19C-PI 307 CG32505-PI 22..301 162..445 706 45.6 Plus
Pp4-19C-PH 307 CG32505-PH 22..301 162..445 706 45.6 Plus
Pp4-19C-PG 307 CG32505-PG 22..301 162..445 706 45.6 Plus
Pp4-19C-PE 307 CG32505-PE 22..301 162..445 706 45.6 Plus
Pp4-19C-PA 307 CG32505-PA 22..301 162..445 706 45.6 Plus
CG11597-PC 317 CG11597-PC 30..309 162..434 644 45.2 Plus
CG11597-PB 317 CG11597-PB 30..309 162..434 644 45.2 Plus
CG11597-PA 317 CG11597-PA 30..309 162..434 644 45.2 Plus
PpV-PD 303 CG12217-PD 9..273 147..416 620 43.5 Plus
PpV-PC 303 CG12217-PC 9..273 147..416 620 43.5 Plus
PpV-PB 303 CG12217-PB 9..273 147..416 620 43.5 Plus
PpV-PA 303 CG12217-PA 9..273 147..416 620 43.5 Plus
Pp2B-14D-PB 570 CG9842-PB 21..395 40..420 601 33.8 Plus
Pp2B-14D-PC 570 CG9842-PC 21..395 40..420 601 33.8 Plus
Pp2B-14D-PA 570 CG9842-PA 21..395 40..420 601 33.8 Plus
CanA-14F-PD 584 CG9819-PD 32..403 55..420 591 33.7 Plus
CanA-14F-PC 584 CG9819-PC 32..403 55..420 591 33.7 Plus
CanA-14F-PB 584 CG9819-PB 32..403 55..420 591 33.7 Plus
CanA-14F-PA 584 CG9819-PA 32..403 55..420 591 33.7 Plus
PpD3-PC 520 CG8402-PC 165..486 99..415 540 37.5 Plus
PpD3-PA 520 CG8402-PA 165..486 99..415 540 37.5 Plus
PpD3-PB 520 CG8402-PB 165..486 99..415 540 37.5 Plus
CanA1-PB 596 CG1455-PB 2..369 48..420 539 31.9 Plus
CanA1-PD 622 CG1455-PD 2..369 48..420 539 31.9 Plus
CanA1-PA 622 CG1455-PA 2..369 48..420 539 31.9 Plus
rdgC-PB 661 CG44746-PB 144..405 180..423 383 33.1 Plus
rdgC-PI 677 CG44746-PI 160..421 180..423 383 33.1 Plus
rdgC-PH 746 CG44746-PH 229..490 180..423 383 33.1 Plus
rdgC-PG 746 CG44746-PG 229..490 180..423 383 33.1 Plus
rdgC-PF 746 CG44746-PF 229..490 180..423 383 33.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:12:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15196-PA 449 GI15196-PA 1..449 1..461 2107 90 Plus
Dmoj\GI10084-PA 328 GI10084-PA 18..328 149..461 1425 83.1 Plus
Dmoj\GI22788-PA 302 GI22788-PA 17..302 149..434 1401 87.1 Plus
Dmoj\GI15416-PA 303 GI15416-PA 17..302 149..434 1387 86.4 Plus
Dmoj\GI18733-PA 323 GI18733-PA 36..314 153..431 1224 73.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:12:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27176-PA 302 GL27176-PA 17..302 149..434 1404 87.4 Plus
Dper\GL16957-PA 312 GL16957-PA 24..302 153..431 1252 75.6 Plus
Dper\GL17499-PA 342 GL17499-PA 45..334 159..448 1040 60.7 Plus
Dper\GL16956-PA 354 GL16956-PA 56..338 149..429 1018 61.8 Plus
Dper\GL14718-PA 298 GL14718-PA 21..292 155..426 1004 62.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:12:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22335-PA 302 GA22335-PA 1..302 160..461 1647 100 Plus
Dpse\GA26434-PA 327 GA26434-PA 17..327 149..461 1424 83.1 Plus
Dpse\GA19032-PA 302 GA19032-PA 17..302 149..434 1404 87.4 Plus
Dpse\GA26586-PA 342 GA26586-PA 57..342 149..434 1376 85.3 Plus
Dpse\GA25003-PA 312 GA25003-PA 24..302 153..431 1255 75.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:12:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26605-PA 327 GM26605-PA 17..327 149..461 1424 83.1 Plus
Dsec\GM26010-PA 302 GM26010-PA 17..302 149..434 1396 87.1 Plus
Dsec\GM23981-PA 302 GM23981-PA 17..302 149..434 1386 86.7 Plus
Dsec\GM15672-PA 344 GM15672-PA 18..332 134..458 1039 57.8 Plus
Dsec\GM19939-PA 314 GM19939-PA 21..297 155..431 1032 65 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:12:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21106-PA 327 GD21106-PA 17..327 149..461 1422 83.1 Plus
Dsim\GD20567-PA 302 GD20567-PA 17..302 149..434 1396 87.1 Plus
Dsim\GD15806-PA 302 GD15806-PA 17..302 149..434 1386 86.7 Plus
Dsim\GD15211-PA 344 GD15211-PA 18..332 134..458 1041 57.8 Plus
Dsim\GD25158-PA 324 GD25158-PA 25..319 142..436 1028 62 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:12:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14803-PA 446 GJ14803-PA 1..446 1..461 2171 89.6 Plus
Dvir\GJ23819-PA 327 GJ23819-PA 17..327 149..461 1424 83.1 Plus
Dvir\GJ22791-PA 302 GJ22791-PA 17..302 149..434 1401 87.1 Plus
Dvir\GJ21755-PA 319 GJ21755-PA 31..309 153..431 1224 73.8 Plus
Dvir\GJ20587-PA 359 GJ20587-PA 32..339 117..428 1080 60.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:12:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20095-PA 456 GK20095-PA 1..456 1..461 2268 93.3 Plus
Dwil\GK22343-PA 327 GK22343-PA 17..327 149..461 1424 83.1 Plus
Dwil\GK12844-PA 302 GK12844-PA 17..302 149..434 1405 87.4 Plus
Dwil\GK20015-PA 302 GK20015-PA 17..302 149..434 1395 87.4 Plus
Dwil\GK15929-PA 313 GK15929-PA 25..303 153..431 1252 76.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17843-PA 469 GE17843-PA 1..469 1..461 2406 96.8 Plus
Dyak\GE23493-PA 329 GE23493-PA 19..329 149..461 1423 83.1 Plus
Dyak\GE24518-PA 302 GE24518-PA 17..302 149..434 1396 87.1 Plus
Dyak\GE16053-PA 302 GE16053-PA 17..302 149..434 1386 86.7 Plus
Dyak\GE19822-PA 313 GE19822-PA 25..303 153..431 1244 76.3 Plus

GH05039.hyp Sequence

Translation from 735 to 2120

> GH05039.hyp
MGDFDLNVDSLIQRLLENFKKQKEAEEHAQKLLIAQQLAAAGGASGASAT
SPTSSSNYSSMAAVASFGSGYGSGSGAGAPGAGAGPGSSHDPLDDLTEQQ
RRLLQQYSISPPSETMISADGDQITVHHPREEPKKSRLKLRDFFVAEFVR
SCRTGKQVQMTEAEVRGLCLKSREIFLQQPILLELEAPLIICGDIHGQYT
DLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
LRGNHECASINRIYGFYDECKRRYNVKLWKTFTDCFNCLPVAAIIDEKIF
CCHGGLSPDLQGMEQIRRLMRPTDVPDTGLLCDLLWSDPDKDVQGWGEND
RGVSFTFGVDVVSKFLNRHELDLICRAHQVVEDGYEFFARRQLVTLFSAP
NYCGEFDNAGGMMTVDDTLMCSFQILKPSEKKAKYLYSGMNSSRPTTPQR
SAPMLATNKKK*

GH05039.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:26
Subject Length Description Subject Range Query Range Score Percent Strand
flw-PA 461 CG2096-PA 1..461 1..461 2434 100 Plus
flw-PC 330 CG2096-PC 18..330 149..461 1684 99.7 Plus
flw-PB 330 CG2096-PB 18..330 149..461 1684 99.7 Plus
Pp1alpha-96A-PB 327 CG6593-PB 17..327 149..461 1409 83.1 Plus
Pp1alpha-96A-PA 327 CG6593-PA 17..327 149..461 1409 83.1 Plus