Clone GH05177 Report

Search the DGRC for GH05177

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:51
Well:77
Vector:pOT2
Associated Gene/TranscriptCG1791-RA
Protein status:GH05177.pep: gold
Preliminary Size:1284
Sequenced Size:1133

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1791 2003-01-01 Sim4 clustering to Release 3
CG1791 2005-01-26 Blastp of sequenced clone
CG1791 2008-04-29 Release 5.5 accounting
CG1791 2008-08-15 Release 5.9 accounting
CG1791 2008-12-18 5.12 accounting

Clone Sequence Records

GH05177.complete Sequence

1133 bp (1133 high quality bases) assembled on 2005-01-26

GenBank Submission: BT021442

> GH05177.complete
GAACACGTACGTCGGTGTAAATATATATAATTAAATCGCGATGGCGCTGG
AGGCGCTCGTCACGGCTTTGGCTTGCCTCAGCACCACCACAAATGCCACG
AGTAACTTGCCAGGAAAACACTTTTCCGTGATAATGAGAAACTCGGCGGA
GCCCTTTTTGCTGGCTGAAAATGATACCGCCAGTTGTCCAGTAAGCACTT
TGGCTGGCTTAGCAGCACGTGTACAATTCATGACAGATGAGCTGCAAAAT
CTCAAAACAGAGCTTAATGAGCTACAGGGACTCATTGAGGAGTATAAAAA
TCAGGGCACCGGAATACCCATTGCAACCAGGTTACTTCGCCCATTGCCAG
CAAGTGTGCAGACCTTTCCGTTGGCGCTGGCCACGCCCCCCGACGATACG
CCCCGAAATTGCTACGATGAGAAGCATGGTCAGGTGAGGATCCGAATTGC
TCCGGATATGGAACCCTTCTTCGCGAGCTGTGACCAGAAAGTGAGAGATG
GTGGCTGGATGGTGATCGCCTATAGATTCGATGGCAGCGAGGACTTCAAC
AAGGATTGGCAGAACTATAAGGCCGGTTTTGGCGCTTTAAACTCGGAGTT
CTTTATCGGATTGGATAAGCTGCACAGGTTGACCAACAGTGAGCACCACG
AGTTGCTCATCATAATGAAGAAGAAAAGTGGAGAGGAACGTTTCGCGCTG
TACGATCACTTCAGTATTGGCAGTGAATCGGAAAAGTATCTTCTATATGT
ACTTGGTGCCTACAAAGGTGATGCTGGTGATTCGCTACGTTACCATGCGG
GCAAGAAGTTCACCACATTCGATCAGGATAACGACGATAATGGCCAAAAC
TGCGCCAGGACGCATGCAGGTGCCTGGTGGTATGGAAGGGAGTGCTTCGA
GAGCAACTTGTTTGGTACATTCCAGTCGAAGTACGGACAGGAGATTGGCT
ATTTCAAGGGCATCCTGTGGAAATCCTTCCTGCCAGGACCCACTGGCTCG
CTTAGCTATGTCCGCATGCTCATCCGGCCGCTCAAGAAACAGTAGACGAA
GCTATCACATATTCAATCACAAAGACTCCTCAGGCATAGAATACAATAAA
TGTCGATTATTTAACAAAAAAAAAAAAAAAAAA

GH05177.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:44:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG1791-RA 1292 CG1791-RA 178..1292 1..1115 5575 100 Plus
CG1791-RB 1193 CG1791-RB 412..1193 334..1115 3910 100 Plus
CG1791-RB 1193 CG1791-RB 65..397 1..333 1665 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:26:01
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 9855376..9855945 903..334 2820 99.6 Minus
chrX 22417052 chrX 9855104..9855317 1115..902 1070 100 Minus
chrX 22417052 chrX 9856293..9856465 173..1 865 100 Minus
chrX 22417052 chrX 9856017..9856131 333..219 575 100 Minus
chrX 22417052 chrX 9856189..9856235 219..173 235 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:32:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:26:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9963725..9964294 903..334 2850 100 Minus
X 23542271 X 9963451..9963666 1117..902 1080 100 Minus
X 23542271 X 9964642..9964814 173..1 865 100 Minus
X 23542271 X 9964366..9964480 333..219 575 100 Minus
X 23542271 X 9964538..9964584 219..173 235 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:34:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 9971823..9972392 903..334 2850 100 Minus
X 23527363 X 9971549..9971764 1117..902 1080 100 Minus
X 23527363 X 9972740..9972912 173..1 865 100 Minus
X 23527363 X 9972464..9972578 333..219 575 100 Minus
X 23527363 X 9972636..9972682 219..173 235 100 Minus
Blast to na_te.dros performed on 2019-03-16 15:26:00 has no hits.

GH05177.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:26:55 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 9855104..9855315 904..1115 100 <- Minus
chrX 9855376..9855945 334..903 99 <- Minus
chrX 9856017..9856130 220..333 100 <- Minus
chrX 9856189..9856235 173..219 100 <- Minus
chrX 9856294..9856465 1..172 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:17:30 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 1..1005 41..1045 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:13:33 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 1..1005 41..1045 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:45:02 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 1..1005 41..1045 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:58:02 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 1..1005 41..1045 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:46:01 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 1..1005 41..1045 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:09:54 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 65..1179 1..1115 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:13:33 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 65..1179 1..1115 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:45:02 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 65..1179 1..1115 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:58:02 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 65..1179 1..1115 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:46:01 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 65..1179 1..1115 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:26:55 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
X 9963453..9963664 904..1115 100 <- Minus
X 9963725..9964294 334..903 100 <- Minus
X 9964366..9964479 220..333 100 <- Minus
X 9964538..9964584 173..219 100 <- Minus
X 9964643..9964814 1..172 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:26:55 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
X 9963453..9963664 904..1115 100 <- Minus
X 9963725..9964294 334..903 100 <- Minus
X 9964366..9964479 220..333 100 <- Minus
X 9964538..9964584 173..219 100 <- Minus
X 9964643..9964814 1..172 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:26:55 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
X 9963453..9963664 904..1115 100 <- Minus
X 9963725..9964294 334..903 100 <- Minus
X 9964366..9964479 220..333 100 <- Minus
X 9964538..9964584 173..219 100 <- Minus
X 9964643..9964814 1..172 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:45:02 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9858676..9858847 1..172 100   Minus
arm_X 9857486..9857697 904..1115 100 <- Minus
arm_X 9857758..9858327 334..903 100 <- Minus
arm_X 9858399..9858512 220..333 100 <- Minus
arm_X 9858571..9858617 173..219 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:33:31 Download gff for GH05177.complete
Subject Subject Range Query Range Percent Splice Strand
X 9971551..9971762 904..1115 100 <- Minus
X 9971823..9972392 334..903 100 <- Minus
X 9972464..9972577 220..333 100 <- Minus
X 9972636..9972682 173..219 100 <- Minus
X 9972741..9972912 1..172 100   Minus

GH05177.hyp Sequence

Translation from 40 to 1044

> GH05177.hyp
MALEALVTALACLSTTTNATSNLPGKHFSVIMRNSAEPFLLAENDTASCP
VSTLAGLAARVQFMTDELQNLKTELNELQGLIEEYKNQGTGIPIATRLLR
PLPASVQTFPLALATPPDDTPRNCYDEKHGQVRIRIAPDMEPFFASCDQK
VRDGGWMVIAYRFDGSEDFNKDWQNYKAGFGALNSEFFIGLDKLHRLTNS
EHHELLIIMKKKSGEERFALYDHFSIGSESEKYLLYVLGAYKGDAGDSLR
YHAGKKFTTFDQDNDDNGQNCARTHAGAWWYGRECFESNLFGTFQSKYGQ
EIGYFKGILWKSFLPGPTGSLSYVRMLIRPLKKQ*

GH05177.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG1791-PA 334 CG1791-PA 1..334 1..334 1778 100 Plus
CG1791-PC 333 CG1791-PC 1..333 1..334 1762 99.7 Plus
CG1791-PB 195 CG1791-PB 1..195 140..334 1069 100 Plus
CG1889-PD 338 CG1889-PD 5..334 1..330 774 46.4 Plus
CG1889-PC 332 CG1889-PC 5..328 1..330 773 47.2 Plus

GH05177.pep Sequence

Translation from 40 to 1044

> GH05177.pep
MALEALVTALACLSTTTNATSNLPGKHFSVIMRNSAEPFLLAENDTASCP
VSTLAGLAARVQFMTDELQNLKTELNELQGLIEEYKNQGTGIPIATRLLR
PLPASVQTFPLALATPPDDTPRNCYDEKHGQVRIRIAPDMEPFFASCDQK
VRDGGWMVIAYRFDGSEDFNKDWQNYKAGFGALNSEFFIGLDKLHRLTNS
EHHELLIIMKKKSGEERFALYDHFSIGSESEKYLLYVLGAYKGDAGDSLR
YHAGKKFTTFDQDNDDNGQNCARTHAGAWWYGRECFESNLFGTFQSKYGQ
EIGYFKGILWKSFLPGPTGSLSYVRMLIRPLKKQ*

GH05177.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:58:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19143-PA 324 GF19143-PA 1..323 1..333 1278 71.2 Plus
Dana\GF19159-PA 338 GF19159-PA 5..334 1..330 742 44.3 Plus
Dana\GF13877-PA 250 GF13877-PA 47..245 128..330 450 45.1 Plus
Dana\GF21732-PA 302 GF21732-PA 12..299 40..330 441 38.7 Plus
Dana\GF12573-PA 434 GF12573-PA 121..415 43..330 439 36.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:59:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18953-PA 334 GG18953-PA 1..334 1..334 1739 95.8 Plus
Dere\GG18333-PA 332 GG18333-PA 5..328 1..330 793 47.3 Plus
Dere\GG24402-PA 218 GG24402-PA 2..212 117..332 472 45.2 Plus
Dere\GG23629-PA 277 GG23629-PA 83..271 140..330 425 43.5 Plus
Dere\GG24228-PA 227 GG24228-PA 39..224 138..330 423 45.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:59:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12910-PA 320 GH12910-PA 1..318 1..333 1207 67.6 Plus
Dgri\GH11810-PA 331 GH11810-PA 5..326 1..330 709 41.6 Plus
Dgri\GH22725-PA 1238 GH22725-PA 973..1238 75..333 486 40.4 Plus
Dgri\GH22716-PA 425 GH22716-PA 228..410 141..332 482 47.9 Plus
Dgri\GH23089-PA 257 GH23089-PA 73..256 142..332 460 49.7 Plus
Dgri\GH22725-PA 1238 GH22725-PA 685..898 57..281 440 41.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG1791-PA 334 CG1791-PA 1..334 1..334 1778 100 Plus
CG1791-PC 333 CG1791-PC 1..333 1..334 1762 99.7 Plus
CG1791-PB 195 CG1791-PB 1..195 140..334 1069 100 Plus
CG1889-PD 338 CG1889-PD 5..334 1..330 774 46.4 Plus
CG1889-PC 332 CG1889-PC 5..328 1..330 773 47.2 Plus
CG1889-PA 332 CG1889-PA 5..328 1..330 773 47.2 Plus
CG30281-PA 291 CG30281-PA 84..273 138..330 432 46.7 Plus
CG31832-PB 227 CG31832-PB 21..224 120..330 422 42 Plus
CG9500-PB 292 CG9500-PB 78..286 121..330 416 42.1 Plus
CG6788-PA 358 CG6788-PA 105..355 68..330 413 37.9 Plus
CG8642-PB 429 CG8642-PB 224..412 138..330 413 46.7 Plus
CG10359-PG 459 CG10359-PG 184..452 54..333 412 38.8 Plus
CG10359-PE 485 CG10359-PE 210..478 54..333 412 38.8 Plus
CG30280-PD 288 CG30280-PD 58..278 113..330 383 37.8 Plus
CG5550-PA 246 CG5550-PA 45..245 127..330 374 38.5 Plus
CG5550-PB 250 CG5550-PB 45..249 127..330 359 37.8 Plus
CG41520-PD 627 CG41520-PD 429..614 147..330 304 38.2 Plus
CG41520-PA 745 CG41520-PA 547..732 147..330 304 38.2 Plus
sca-PB 799 CG17579-PB 447..709 51..294 275 28.3 Plus
sca-PA 799 CG17579-PA 447..709 51..294 275 28.3 Plus
CG41520-PB 729 CG41520-PB 547..716 147..330 266 35.6 Plus
CG7668-PC 422 CG7668-PC 236..421 132..331 248 34.3 Plus
CG7668-PA 422 CG7668-PA 236..421 132..331 248 34.3 Plus
CG9593-PB 382 CG9593-PB 196..371 156..331 239 32.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:59:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14614-PA 322 GI14614-PA 1..321 1..333 1079 60.7 Plus
Dmoj\GI18379-PA 330 GI18379-PA 39..330 32..334 453 37 Plus
Dmoj\GI18820-PA 211 GI18820-PA 12..202 137..330 450 47.4 Plus
Dmoj\GI20830-PA 239 GI20830-PA 7..239 98..332 447 42.3 Plus
Dmoj\GI21094-PA 389 GI21094-PA 104..385 40..331 435 36.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:59:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16385-PA 352 GL16385-PA 5..347 1..330 711 44.1 Plus
Dper\GL26564-PA 224 GL26564-PA 30..216 141..334 477 47.4 Plus
Dper\GL16598-PA 196 GL16598-PA 1..161 1..164 476 60.8 Plus
Dper\GL11471-PA 436 GL11471-PA 119..398 43..313 433 37.7 Plus
Dper\GL16674-PA 447 GL16674-PA 165..443 64..334 410 37.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:59:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14719-PA 324 GA14719-PA 1..322 1..333 1342 76.6 Plus
Dpse\GA15110-PA 338 GA15110-PA 5..333 1..330 697 43.1 Plus
Dpse\GA28982-PA 271 GA28982-PA 77..263 141..334 486 47.9 Plus
Dpse\GA21232-PA 434 GA21232-PA 119..413 43..330 456 38.6 Plus
Dpse\GA25261-PA 262 GA25261-PA 57..250 138..330 413 44.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:59:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18824-PA 334 GM18824-PA 1..334 1..334 1754 96.4 Plus
Dsec\GM18826-PA 242 GM18826-PA 22..238 112..330 686 57.1 Plus
Dsec\GM14577-PA 227 GM14577-PA 24..224 115..330 424 42.9 Plus
Dsec\GM22864-PA 358 GM22864-PA 98..355 58..330 424 38.3 Plus
Dsec\GM17946-PA 293 GM17946-PA 79..287 121..330 419 42.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:59:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24553-PA 306 GD24553-PA 1..306 1..334 1574 88.3 Plus
Dsim\GD24781-PA 332 GD24781-PA 5..328 1..330 799 47.3 Plus
Dsim\GD17373-PA 358 GD17373-PA 91..355 51..330 423 37.4 Plus
Dsim\GD11645-PA 292 GD11645-PA 79..274 132..330 420 44.9 Plus
Dsim\GD22585-PA 292 GD22585-PA 78..286 121..330 418 41.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:59:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19428-PA 324 GJ19428-PA 1..323 1..333 1274 72.1 Plus
Dvir\GJ18721-PA 346 GJ18721-PA 5..341 1..330 749 43.5 Plus
Dvir\GJ12860-PA 287 GJ12860-PA 20..279 71..330 490 42.4 Plus
Dvir\GJ21456-PA 350 GJ21456-PA 62..342 27..330 446 36.7 Plus
Dvir\GJ20563-PA 242 GJ20563-PA 4..242 92..332 439 40.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:59:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25564-PA 336 GK25564-PA 1..335 1..333 1272 70.5 Plus
Dwil\GK25364-PA 337 GK25364-PA 6..331 1..330 774 44.8 Plus
Dwil\GK21394-PA 313 GK21394-PA 57..271 115..330 430 41.8 Plus
Dwil\GK19440-PA 291 GK19440-PA 94..282 138..330 424 47.2 Plus
Dwil\GK19592-PA 195 GK19592-PA 2..191 140..330 411 45.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:59:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15425-PA 335 GE15425-PA 1..335 1..334 1728 95.8 Plus
Dyak\GE17819-PA 332 GE17819-PA 5..328 1..330 781 45.3 Plus
Dyak\GE12242-PA 288 GE12242-PA 79..274 132..330 439 46.3 Plus
Dyak\GE17696-PA 363 GE17696-PA 96..360 51..330 425 37.6 Plus
Dyak\GE24720-PA 227 GE24720-PA 24..224 115..330 420 42.9 Plus