BDGP Sequence Production Resources |
Search the DGRC for GH05218
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 52 |
Well: | 18 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9629-RA |
Protein status: | GH05218.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2066 |
Gene | Date | Evidence |
---|---|---|
CG9629 | 2001-01-01 | Release 2 assignment |
CG9629 | 2001-10-10 | Blastp of sequenced clone |
CG9629 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9629 | 2008-04-29 | Release 5.5 accounting |
CG9629 | 2008-08-15 | Release 5.9 accounting |
CG9629 | 2008-12-18 | 5.12 accounting |
2066 bp (2066 high quality bases) assembled on 2001-10-10
GenBank Submission: AY089492
> GH05218.complete TCAGTCGTTCCATCGATCCGGACACCTACCAACATGTTGGCACAATTGAG AAATATTTCGAAGCTGGCGCTGCCGCGCCGCCTCGTTACCCAAACCGCCA GCTACTCATCGTCCTCGTCATATCTCATTGACCAGCCGGAGTACAGTTTC CTGAAAGAATTGGGACTGGAGCGCGACAATCCAGGTGTTTATTCGGGTCA GTGGCAGGGTCGTGGGCCATCCGTTACCAGCTACGATCCCGGAACTGGTC AACCGATTGCCAAAGTGCGTCAGGGAAATGTCCAGGAGCTCGAGCATACC ATCGGGCTGGCGGTGGAAGCCTACAAGCAGTGGCGACAGGTTCCAGCTCC CGTTCGCGGCGAAATAGTGCGCCAAATCGGCGATGAGCTGAGAAAGTACA AGGAACCACTGGGAAAGCTCGTCTCCCTGGAGGTGGGCAAAATCTACAGC GAGGGACAGGGCGAGGTTCAGGAGTTCATAGATATCTGCGACTATGCGGT TGGCCTCTCAAGGATTTACTCCGGCCAGCTGATCAACTCGGAGCGTGCGG ATCATTCGATTCTGGAGGCCTGGCGTCCGCTGGGAGTGGTGGGCGTTATT TCGGCCTACAATTTTCCCAATGCTGTGTTCGGCTGGAATGCTGCCATCGC CCTAACCACCGGCAACAGTGTGCTGTGGAAAGGAGCTCCCAGCACTCCCT TGGTCTCGGTGGCGACCACAAAAATTGTGGCTGAAGTGCTGCGTAGGAAC AATCTGCCGCCGGTGGTGACCCTCTGCCAAGGAGGAACCGATGTTGGTCA GACCTTGGTGGCTGATAAGAGAGTTAACCTCGTTTCCTTCACCGGCAGCT GCCAAACTGGTCGGGATGTGGGTGTTGAAGTGCAGCGCAGATTCGGCAAG GTGATCCTCGAGCTAGGCGGCAATAATGCCCTAATCATCGATGAATCTGC CAACGTGAAGATGGCCCTGGACGCCGCACTTTTCGGCTGCATTGGCACCA GTGGTCAAAGATGCACCACCACCAGGAGGATTATTGTCCACGAAAAGCTG CACGATCAGTTCGTAAAGGAGCTGGTTGGTAAATATAAGCAGCTAATTTC CAAGATTGGACACCAGCTCGAAGCTCAAACTCTGGTGGGTCCCGTGCACA CGCAACAAAACGTGGAGAACTACAAGGCGGCCATCGCGGAAGCGAAATCC TTAGGAGGAACGGTGGCCTTCGGAGGTAATGTCATCCAGCGGGATGGTTT TTACGTAGAGCCCACAGTGATCACTGGATTGCCGCACGATGCCAGCGTTG TCCATCGCGAAACCTTTGCACCAATTGTGTACATCCTCAAAGCCAAAAAC GTGGACCAGGCCATCGAATGGAACAATGAGGTGGAACAGGGCTTATCCTC TGCCATTTTCACGGAGAACATCGGGCAGGCGTTCAAGTGGATTGGAGCCA AGGGTTCCGATTGCGGTATAGTTAACATCAACACCACCACCAACGGCGCC GAGATTGGTGGAGCTTTCGGAGGCGAAAAAGCCACTGGAGGAGGTCGCGA GTCCGGATCCGATGCCTGGAAGCAGTATTGCAAGCGGGCCACCATTACAG TCAATCACTCCGGAGAATTGGCCTGCGCCCAGGGTGTTGTCTTCAATGTG GAGTAGAAAACACATACGATCAATTTTAATGTGCTACAATTTACAATACT ATTACATATAATGTCCAAAACTAAATGCAACTGATATAATTCTTCCTATT CCGTGCCGATTTCAAAGCGCCAGAAGTCCACCTCAATATCCTTCGACTTC TGCTTGTGAAACTTGTAGCTGGCGTCGATGTTGTACCGGAGTTCGGCGAC CACTGAGCCGCGGGCGCCCCATTCCAGTGCCTTTTTCTGAATGTACGACC TGCGAACAATTAAAATCGATATTTAAATTGGCTTTGATGTACTATTCCAC AGTTGTTTAGGCTTGGCTATTCTTCCATAAAAAACAGGAAGGGGTCGAAT AATAAGATACCCTTTTAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9629-RA | 2110 | CG9629-RA | 90..2110 | 1..2021 | 10105 | 100 | Plus |
nc_13463.a | 548 | nc_13463.a | 298..548 | 1899..1649 | 1255 | 100 | Minus |
CG9666-RB | 1030 | CG9666-RB | 785..1030 | 1900..1655 | 1230 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 19255939..19257926 | 2020..33 | 9850 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 19266470..19268460 | 2023..33 | 9955 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19255939..19257926 | 33..2020 | 99 | <- | Minus |
chr3L | 19258315..19258346 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9629-RA | 1..1623 | 34..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9629-RA | 1..1623 | 34..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9629-RA | 1..1623 | 34..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9629-RA | 1..1623 | 34..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9629-RA | 1..1623 | 34..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9629-RA | 30..2049 | 1..2020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9629-RA | 30..2049 | 1..2020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9629-RA | 34..2053 | 1..2020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9629-RA | 30..2049 | 1..2020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9629-RA | 34..2053 | 1..2020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19266473..19268460 | 33..2020 | 100 | <- | Minus |
3L | 19268849..19268880 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19266473..19268460 | 33..2020 | 100 | <- | Minus |
3L | 19268849..19268880 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19266473..19268460 | 33..2020 | 100 | <- | Minus |
3L | 19268849..19268880 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19259573..19261560 | 33..2020 | 100 | <- | Minus |
arm_3L | 19261949..19261980 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19259573..19261560 | 33..2020 | 100 | <- | Minus |
3L | 19261949..19261980 | 1..32 | 100 | Minus |
Translation from 1 to 1655
> GH05218.hyp SVVPSIRTPTNMLAQLRNISKLALPRRLVTQTASYSSSSSYLIDQPEYSF LKELGLERDNPGVYSGQWQGRGPSVTSYDPGTGQPIAKVRQGNVQELEHT IGLAVEAYKQWRQVPAPVRGEIVRQIGDELRKYKEPLGKLVSLEVGKIYS EGQGEVQEFIDICDYAVGLSRIYSGQLINSERADHSILEAWRPLGVVGVI SAYNFPNAVFGWNAAIALTTGNSVLWKGAPSTPLVSVATTKIVAEVLRRN NLPPVVTLCQGGTDVGQTLVADKRVNLVSFTGSCQTGRDVGVEVQRRFGK VILELGGNNALIIDESANVKMALDAALFGCIGTSGQRCTTTRRIIVHEKL HDQFVKELVGKYKQLISKIGHQLEAQTLVGPVHTQQNVENYKAAIAEAKS LGGTVAFGGNVIQRDGFYVEPTVITGLPHDASVVHRETFAPIVYILKAKN VDQAIEWNNEVEQGLSSAIFTENIGQAFKWIGAKGSDCGIVNINTTTNGA EIGGAFGGEKATGGGRESGSDAWKQYCKRATITVNHSGELACAQGVVFNV E*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9629-PA | 540 | CG9629-PA | 1..540 | 12..551 | 2786 | 100 | Plus |
Ssadh-PE | 509 | CG4685-PE | 51..495 | 79..526 | 478 | 26.8 | Plus |
Ssadh-PD | 509 | CG4685-PD | 51..495 | 79..526 | 478 | 26.8 | Plus |
Ssadh-PC | 509 | CG4685-PC | 51..495 | 79..526 | 478 | 26.8 | Plus |
Ssadh-PB | 509 | CG4685-PB | 51..495 | 79..526 | 478 | 26.8 | Plus |
Translation from 33 to 1655
> GH05218.pep MLAQLRNISKLALPRRLVTQTASYSSSSSYLIDQPEYSFLKELGLERDNP GVYSGQWQGRGPSVTSYDPGTGQPIAKVRQGNVQELEHTIGLAVEAYKQW RQVPAPVRGEIVRQIGDELRKYKEPLGKLVSLEVGKIYSEGQGEVQEFID ICDYAVGLSRIYSGQLINSERADHSILEAWRPLGVVGVISAYNFPNAVFG WNAAIALTTGNSVLWKGAPSTPLVSVATTKIVAEVLRRNNLPPVVTLCQG GTDVGQTLVADKRVNLVSFTGSCQTGRDVGVEVQRRFGKVILELGGNNAL IIDESANVKMALDAALFGCIGTSGQRCTTTRRIIVHEKLHDQFVKELVGK YKQLISKIGHQLEAQTLVGPVHTQQNVENYKAAIAEAKSLGGTVAFGGNV IQRDGFYVEPTVITGLPHDASVVHRETFAPIVYILKAKNVDQAIEWNNEV EQGLSSAIFTENIGQAFKWIGAKGSDCGIVNINTTTNGAEIGGAFGGEKA TGGGRESGSDAWKQYCKRATITVNHSGELACAQGVVFNVE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10773-PA | 537 | GF10773-PA | 1..537 | 1..540 | 2648 | 93.1 | Plus |
Dana\GF17265-PA | 507 | GF17265-PA | 49..493 | 68..515 | 474 | 28.8 | Plus |
Dana\GF14331-PA | 913 | GF14331-PA | 454..913 | 68..525 | 465 | 27.5 | Plus |
Dana\GF22728-PA | 520 | GF22728-PA | 54..513 | 61..523 | 454 | 28.5 | Plus |
Dana\GF22966-PA | 485 | GF22966-PA | 25..482 | 61..523 | 422 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13416-PA | 540 | GG13416-PA | 1..540 | 1..540 | 2802 | 98 | Plus |
Dere\GG12233-PA | 509 | GG12233-PA | 51..495 | 68..515 | 472 | 27.7 | Plus |
Dere\GG21301-PA | 913 | GG21301-PA | 454..913 | 68..525 | 464 | 27.1 | Plus |
Dere\GG25345-PA | 520 | GG25345-PA | 61..513 | 68..523 | 443 | 27.9 | Plus |
Dere\GG12158-PA | 485 | GG12158-PA | 25..482 | 61..523 | 441 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14418-PA | 540 | GH14418-PA | 1..540 | 1..540 | 2495 | 86.3 | Plus |
Dgri\GH13227-PA | 518 | GH13227-PA | 33..511 | 49..523 | 496 | 27.8 | Plus |
Dgri\GH18609-PA | 501 | GH18609-PA | 43..487 | 68..515 | 490 | 28.9 | Plus |
Dgri\GH13324-PA | 521 | GH13324-PA | 55..514 | 61..523 | 462 | 28.1 | Plus |
Dgri\GH13317-PA | 913 | GH13317-PA | 454..913 | 68..525 | 453 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9629-PA | 540 | CG9629-PA | 1..540 | 1..540 | 2786 | 100 | Plus |
Ssadh-PE | 509 | CG4685-PE | 51..495 | 68..515 | 478 | 26.8 | Plus |
Ssadh-PD | 509 | CG4685-PD | 51..495 | 68..515 | 478 | 26.8 | Plus |
Ssadh-PC | 509 | CG4685-PC | 51..495 | 68..515 | 478 | 26.8 | Plus |
Ssadh-PB | 509 | CG4685-PB | 51..495 | 68..515 | 478 | 26.8 | Plus |
Ssadh-PA | 509 | CG4685-PA | 51..495 | 68..515 | 478 | 26.8 | Plus |
Aldh-PB | 520 | CG3752-PB | 54..513 | 61..523 | 455 | 28.7 | Plus |
Aldh-PA | 520 | CG3752-PA | 54..513 | 61..523 | 455 | 28.7 | Plus |
CG8665-PA | 913 | CG8665-PA | 454..913 | 68..525 | 454 | 27.1 | Plus |
CG31075-PA | 485 | CG31075-PA | 25..482 | 61..523 | 453 | 27.7 | Plus |
CG31075-PB | 508 | CG31075-PB | 48..505 | 61..523 | 453 | 27.7 | Plus |
CG17896-PA | 511 | CG17896-PA | 37..490 | 67..522 | 355 | 24.4 | Plus |
CG17896-PB | 520 | CG17896-PB | 46..499 | 67..522 | 355 | 24.4 | Plus |
Aldh-III-PR | 497 | CG11140-PR | 104..422 | 182..515 | 253 | 26.9 | Plus |
Aldh-III-PM | 498 | CG11140-PM | 104..422 | 182..515 | 253 | 26.9 | Plus |
Aldh-III-PL | 498 | CG11140-PL | 104..422 | 182..515 | 253 | 26.9 | Plus |
Aldh-III-PK | 498 | CG11140-PK | 104..422 | 182..515 | 253 | 26.9 | Plus |
Aldh-III-PI | 498 | CG11140-PI | 104..422 | 182..515 | 253 | 26.9 | Plus |
Aldh-III-PP | 563 | CG11140-PP | 170..488 | 182..515 | 253 | 26.9 | Plus |
Aldh-III-PN | 563 | CG11140-PN | 169..487 | 182..515 | 253 | 26.9 | Plus |
Aldh-III-PE | 497 | CG11140-PE | 104..422 | 182..515 | 248 | 26.1 | Plus |
Aldh-III-PS | 498 | CG11140-PS | 104..422 | 182..515 | 248 | 26.1 | Plus |
Aldh-III-PU | 501 | CG11140-PU | 104..422 | 182..515 | 248 | 26.1 | Plus |
Aldh-III-PO | 563 | CG11140-PO | 169..487 | 182..515 | 248 | 26.1 | Plus |
Aldh-III-PQ | 564 | CG11140-PQ | 170..488 | 182..515 | 248 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13547-PA | 539 | GI13547-PA | 1..539 | 1..540 | 2484 | 86.1 | Plus |
Dmoj\GI18107-PA | 499 | GI18107-PA | 21..492 | 51..523 | 496 | 28.5 | Plus |
Dmoj\GI10356-PA | 489 | GI10356-PA | 31..475 | 68..515 | 495 | 29.3 | Plus |
Dmoj\GI18106-PA | 510 | GI18106-PA | 27..503 | 46..523 | 495 | 28.4 | Plus |
Dmoj\GI17663-PA | 519 | GI17663-PA | 53..512 | 61..523 | 471 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20912-PA | 537 | GL20912-PA | 1..537 | 1..540 | 2550 | 88.9 | Plus |
Dper\GL26144-PA | 520 | GL26144-PA | 12..513 | 17..523 | 484 | 27 | Plus |
Dper\GL21675-PA | 489 | GL21675-PA | 15..475 | 54..515 | 472 | 29.1 | Plus |
Dper\GL26664-PA | 913 | GL26664-PA | 454..913 | 68..525 | 469 | 27.1 | Plus |
Dper\GL23630-PA | 485 | GL23630-PA | 25..482 | 61..523 | 453 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21924-PA | 537 | GA21924-PA | 1..537 | 1..540 | 2556 | 88.9 | Plus |
Dpse\GA25309-PA | 520 | GA25309-PA | 12..513 | 17..523 | 491 | 27 | Plus |
Dpse\GA18355-PA | 505 | GA18355-PA | 28..491 | 51..515 | 474 | 28.9 | Plus |
Dpse\GA21245-PA | 913 | GA21245-PA | 454..913 | 68..525 | 470 | 27.1 | Plus |
Dpse\GA22496-PA | 485 | GA22496-PA | 25..482 | 61..523 | 452 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14883-PA | 540 | GM14883-PA | 1..540 | 1..540 | 2821 | 98.7 | Plus |
Dsec\GM10233-PA | 509 | GM10233-PA | 51..495 | 68..515 | 476 | 27.9 | Plus |
Dsec\GM23412-PA | 913 | GM23412-PA | 454..913 | 68..525 | 459 | 26.9 | Plus |
Dsec\GM17439-PA | 520 | GM17439-PA | 61..513 | 68..523 | 450 | 28.1 | Plus |
Dsec\GM10152-PA | 485 | GM10152-PA | 25..482 | 61..523 | 442 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12292-PA | 540 | GD12292-PA | 1..540 | 1..540 | 2809 | 98.1 | Plus |
Dsim\GD18186-PA | 509 | GD18186-PA | 51..495 | 68..515 | 472 | 27.7 | Plus |
Dsim\GD24321-PA | 913 | GD24321-PA | 454..913 | 68..525 | 463 | 27.3 | Plus |
Dsim\GD18107-PA | 485 | GD18107-PA | 25..482 | 61..523 | 436 | 27.5 | Plus |
Dsim\GD23600-PA | 538 | GD23600-PA | 83..531 | 69..523 | 430 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11906-PA | 542 | GJ11906-PA | 1..542 | 1..540 | 2503 | 86.4 | Plus |
Dvir\GJ17859-PA | 519 | GJ17859-PA | 53..512 | 61..523 | 482 | 28.9 | Plus |
Dvir\GJ10208-PA | 501 | GJ10208-PA | 43..487 | 68..515 | 480 | 28.6 | Plus |
Dvir\GJ16294-PA | 527 | GJ16294-PA | 43..514 | 51..523 | 480 | 27.6 | Plus |
Dvir\GJ17852-PA | 913 | GJ17852-PA | 454..913 | 68..525 | 469 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19673-PA | 538 | GK19673-PA | 1..538 | 1..540 | 2437 | 83.7 | Plus |
Dwil\GK18799-PA | 169 | GK18799-PA | 1..159 | 247..403 | 636 | 76.1 | Plus |
Dwil\GK24201-PA | 521 | GK24201-PA | 55..514 | 61..523 | 501 | 30.3 | Plus |
Dwil\GK14395-PA | 504 | GK14395-PA | 25..490 | 49..515 | 483 | 28.3 | Plus |
Dwil\GK18741-PA | 918 | GK18741-PA | 452..918 | 61..525 | 466 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22513-PA | 540 | GE22513-PA | 1..540 | 1..540 | 2800 | 98 | Plus |
Dyak\GE22917-PA | 540 | GE22917-PA | 1..540 | 1..540 | 2799 | 97.8 | Plus |
Dyak\GE10681-PA | 509 | GE10681-PA | 51..495 | 68..515 | 470 | 28.1 | Plus |
Dyak\GE12917-PA | 913 | GE12917-PA | 454..913 | 68..525 | 453 | 26.9 | Plus |
Dyak\GE18837-PA | 520 | GE18837-PA | 11..513 | 17..523 | 452 | 27.4 | Plus |