BDGP Sequence Production Resources |
Search the DGRC for GH05455
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 54 |
Well: | 55 |
Vector: | pOT2 |
Associated Gene/Transcript | Pif1A-RI |
Protein status: | GH05455.pep: gold |
Preliminary Size: | 3310 |
Sequenced Size: | 3271 |
Gene | Date | Evidence |
---|---|---|
CG9808 | 2001-01-01 | Release 2 assignment |
CG11773 | 2001-01-01 | Release 2 assignment |
CG32940 | 2002-06-07 | Blastp of sequenced clone |
Pif1A | 2008-04-29 | Release 5.5 accounting |
Pif1A | 2008-08-15 | Release 5.9 accounting |
Pif1B | 2008-08-15 | Release 5.9 accounting |
Pif1A | 2008-12-18 | 5.12 accounting |
Pif1B | 2008-12-18 | 5.12 accounting |
3271 bp (3271 high quality bases) assembled on 2002-06-07
GenBank Submission: AY119473
> GH05455.complete TCATTACTCTTATTTAAACATTGTTAATATTTTGAGCAAAGAAATCGCTA AAATTCAAGTTTTATTTTGTTCCCGTACATACAGAACCGGACGGAAACTC CCAAAAGGCACAATTCAACCCACAGTCACAGTCACAGTCACAGCCACAGT CAAAGTCACAACCACAGGATCGTAGCCACAGTTCAGCCGTATAGCAACTG TGCCACGCCCACAGCCCCGCCCACGCCAAGCAAGAGGCACTGCAACCAGG TGAGCTCGTGGCAGAGCAGCAGCCTCAGCGAGAGCGGAGTGTTCGTAGAG TGCGATCTGCTTTCGAATCCCAATCCCATTGGCCACCCGCATCTGCAGTT CTATCAGGAGAGATTGGAGCAGTTGGAGGGCAAGCTGCTGATCTACGAGA GCAGCGGCGAGACCCAGGCACGGCACTTGGCCCAGAGACTGCAGCGGGAA CTGCAGCTGGAGAAGGATCTCAAAGAGCTTGCGGACCGAGTGGAATTGCT AATCGAGCAAAACGCCCAGTTGGAGGAGGCCAAGTGCGAGTTTGAGGAGG CCGAGAACGATACACGACTCCATTTGCAGCGTAACGAGGTGGAACTTGAA ATTCTTCGCCAGCGCAACGTGGAGTTGGAATTCGGCAAGGAAGCACTAGG CGCCAAGTATCAGGATTGCAGGGCGGAGGTACTAATCCTTCGAGAGGATC TAGCGGCAGCTGAAACCCAACTGGAGCATCTGCAGGCCGAAAGGAAGCAA GCCAGAAAGGAGCTTCAGGATCTGAGAAGATCGCTTCCATTACTCCTAAT CTTCCGCTTGTTATCACTAGCCAAAATGGGCAACGAGGAATCCTCCCCGG GAGGCAGCCCCCGCCTCTCCTCGGGCTACACTTCTTCTATACACCAGGAT CGAGATTTCAGTGCCAAGATCCAAACAACGGAGTTTGACCTCGGTCAAGC GGGATTTACCGATTCCGGCGAGGAACGGGAGATCGTTTACCTAAAGGAAG AGGTCAAGAGTCTGCGTAGCCAACTGAAAGAGCTAAATGCCCGGCACTAC GAAGCCATGGAAACAGCAGACTCACACTGGGTAGATCTGGAGCAGCAGTA CAAGGAGCGCGAGGAGGCCCAACAGGCCAAGGAGGCCAGTCTCAAGCAGA AGATAGCCCAACTGCAAGATTGCCTCCGGGAGGATTCCCGAGCGGCGACC GAAAAGATCCAGCAGCTGGAGGAGGGGGAACTGTCATTGAAGTCCTGCCT GGTCCGCATGACCAAGGAGCATCGCGACCTGCTCACCGAGAATCGCACTC TGCAGTGCAGCTTGGAGAGTCTAATGGCCAAAATGGAAAAGGAGGCGGAA CACAAGATGCCCCTAACAGAGGCTCTAGAAAACGAGAGGCGCAAAACCCA GGCACTGATGGATGACCTTATCTTTGCCAAGAAGGTGCAGCAGAACACCG AGGATCAGTTGAGGCAGGAGACGGATGCTTTGCGCACCCAGATCTTCAAC ATCAAAAAGGATTACCTGCACATCGAGGTCACAAATGGCGAGCTGAAAGA GGAGGTGGGCACGCTGGAGAACAAAATCCGCCAGATGGAGAACCAAATGA GGGATTCGGAGGAGCGGGCGCGCTGCCTGGAGGACGAGCTGCGAACCAAG GACGAACAATGCCAGCTCTTGGAACGCAAACTGGGCGTTATGCCCGAGGG CTACAGCCTGGCCGATGAACTCCATGATAGTCCTGCGAAGCGGGCCAAGA AGGATGAGGTACCGAGCCTCCAGGCTGCCAGCCAGGGACTGGGCGTGGCC CTACTCGATCTCGAGGGTCGTGATTTTGGTCTACCACTGCACAAGGACTT CCAAGCAATTGCCTGCAGTGTAAAGCAACTGGCGGATACCCTTCTCTCAC AGAGTCCGTCCGAGGTGAGTCTCCAAAGCAAAGAGCCCGCCAAGCCAGCT GGTTCGGAACCCGAAGGCTCCAGTTGGGCTACGGTCCAGGATGCCTCCTC AGAAAAAATACCTGAGACAGGACTATCAACTGTGACTAGTCTAGAATGCC AGGGAAATCAAGAAACTCAAGATAATCAGGTCATTCAAGAAAATCCGGGA AGTCTAGAAAGTCAAGTCGATTCAGAATATCTGGAAAGTCAAGAAAGAAA TCTCGTTAGCAGCAAGAAATCTAGTTATGTTAGTGTCGTGACATCCTCAT GCCGGTCAATAGTACGGGAATTAGCTGGGGGATCTGCCCAAAAATCTGAA CTACACCTTGGTGAATCAGACAGCAGGGCGAATCCGCAGATAATTCGACC AACAGATGAGCAAGAGAAGAAGATCACCGCGGTGCCCTATTCCATGAGAC AGATGTTCAACGAGGTTTGTTCTGTGGATCAGCAGCACGAACCCGAGCTC AAAAAGAAAAGCAAAAAGCGAGCAAAGAATAAGAAGGAGAAGCATCCAAG ACCAAACAGTCACCAGCGAAAAATACAGCGTTTCCTCTTCCGTCACATTT ACCGTCCACGTACGCTCAATCGAACTCTGGGTTTCCCTCTTCAAAAGAGC CTCTCCTGCAGTAGTTTCCACTCTCTGTTGTCAGTTCACTCGGTTCACTC GGCCAGATCCGGAATTTCCCTGCACTCCCTTCACGCTGAAGTTGTTAATC TTAATTGGGAATCTCTGGCCAGCGTGTCATTTGTACAAACGGACGAGGTG AAAACCCTGGAGGAGGAGGTTCAGGTCACGACACAGTGCAATGAAAAGGA GATGCAAGTTCAACCAGAGACGATTGAGTGTGGAACACAGGTCGATGTGG GTGTGGAGCAACGACTGCTCCTGATGCCTCTGAGAACCAGGTGCTTCGTG GATTTGATTCAGGGCGCCGTGGACGGATACCTCGATGTTGCCGCATTCCG GACCCGTCTTCTTCACTTATGGGAGGGCGGAGAGGATTTCCGTGAGCATC TTGAATTTTTGCAAGACATGTGGATTGAAAAGAGTACTCAGAAGACGCAG GAGAGCTATGAAGGATTTGTGGCTGCTCTGGACTGTGTCCATAACCTAAA GTTGGCCCTTAAGCCTGCATCTTCGGCGCTTTTGCAACAAATCGAGCAGC GAATCCACACAAGACTTCTGCTCTTCCATAACCACAAGGCGGAATCGGAG TTCTGCTGCACTGTCTACATTCCCGTGGAGAGGAGCAATTCCACCTTGTT CAGAGCTAAGAAATAGAGCTTTATTTCTATGTAAATACACCAAACATAAA TGTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 1863..1917 | 2061..2115 | 140 | 72.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4606920..4608357 | 1816..3253 | 100 | <- | Minus |
chr3R | 4608415..4610229 | 1..1815 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pif1A-RB | 789..3927 | 74..3216 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pif1A-RB | 789..3927 | 74..3216 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pif1A-RI | 1..2391 | 826..3216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pif1A-RB | 789..3927 | 74..3216 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pif1A-RI | 1..2391 | 826..3216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pif1A-RB | 1021..4196 | 74..3253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pif1A-RB | 1021..4196 | 74..3253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pif1A-RI | 1..3253 | 1..3253 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pif1A-RB | 1021..4196 | 74..3253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pif1A-RI | 1..3253 | 1..3253 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8780947..8782384 | 1816..3253 | 100 | <- | Minus |
3R | 8782442..8784256 | 1..1815 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8780947..8782384 | 1816..3253 | 100 | <- | Minus |
3R | 8782442..8784256 | 1..1815 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8780947..8782384 | 1816..3253 | 100 | <- | Minus |
3R | 8782442..8784256 | 1..1815 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4606669..4608106 | 1816..3253 | 100 | <- | Minus |
arm_3R | 4608164..4609978 | 1..1815 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8521778..8523215 | 1816..3253 | 100 | <- | Minus |
3R | 8523273..8525087 | 1..1815 | 100 | Minus |
Translation from 825 to 3215
> GH05455.pep MGNEESSPGGSPRLSSGYTSSIHQDRDFSAKIQTTEFDLGQAGFTDSGEE REIVYLKEEVKSLRSQLKELNARHYEAMETADSHWVDLEQQYKEREEAQQ AKEASLKQKIAQLQDCLREDSRAATEKIQQLEEGELSLKSCLVRMTKEHR DLLTENRTLQCSLESLMAKMEKEAEHKMPLTEALENERRKTQALMDDLIF AKKVQQNTEDQLRQETDALRTQIFNIKKDYLHIEVTNGELKEEVGTLENK IRQMENQMRDSEERARCLEDELRTKDEQCQLLERKLGVMPEGYSLADELH DSPAKRAKKDEVPSLQAASQGLGVALLDLEGRDFGLPLHKDFQAIACSVK QLADTLLSQSPSEVSLQSKEPAKPAGSEPEGSSWATVQDASSEKIPETGL STVTSLECQGNQETQDNQVIQENPGSLESQVDSEYLESQERNLVSSKKSS YVSVVTSSCRSIVRELAGGSAQKSELHLGESDSRANPQIIRPTDEQEKKI TAVPYSMRQMFNEVCSVDQQHEPELKKKSKKRAKNKKEKHPRPNSHQRKI QRFLFRHIYRPRTLNRTLGFPLQKSLSCSSFHSLLSVHSVHSARSGISLH SLHAEVVNLNWESLASVSFVQTDEVKTLEEEVQVTTQCNEKEMQVQPETI ECGTQVDVGVEQRLLLMPLRTRCFVDLIQGAVDGYLDVAAFRTRLLHLWE GGEDFREHLEFLQDMWIEKSTQKTQESYEGFVAALDCVHNLKLALKPASS ALLQQIEQRIHTRLLLFHNHKAESEFCCTVYIPVERSNSTLFRAKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16831-PA | 1277 | GF16831-PA | 497..1272 | 1..792 | 2262 | 58.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17419-PA | 1298 | GG17419-PA | 511..1298 | 1..796 | 3340 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19335-PA | 1396 | GH19335-PA | 519..927 | 1..394 | 1110 | 57 | Plus |
Dgri\GH19335-PA | 1396 | GH19335-PA | 1163..1391 | 575..792 | 464 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pif1A-PI | 796 | CG42599-PI | 1..796 | 1..796 | 4054 | 100 | Plus |
Pif1A-PJ | 1264 | CG42599-PJ | 898..1260 | 1..363 | 1832 | 100 | Plus |
Pif1A-PA | 879 | CG33719-PA | 513..875 | 1..363 | 1832 | 100 | Plus |
Pif1A-PH | 1264 | CG42599-PH | 898..1260 | 1..363 | 1832 | 100 | Plus |
Pif1A-PG | 1226 | CG42599-PG | 860..1222 | 1..363 | 1832 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23945-PA | 1266 | GI23945-PA | 561..1262 | 46..792 | 1410 | 45.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12124-PA | 1177 | GL12124-PA | 447..803 | 1..370 | 1078 | 60.7 | Plus |
Dper\GL12124-PA | 1177 | GL12124-PA | 934..1137 | 550..772 | 389 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30020-PA | 1605 | GA30020-PA | 871..1222 | 1..365 | 1086 | 61.8 | Plus |
Dpse\GA30020-PC | 1570 | GA30020-PC | 836..1187 | 1..365 | 1085 | 61.8 | Plus |
Dpse\GA30020-PD | 1182 | GA30020-PD | 448..799 | 1..365 | 1083 | 61.8 | Plus |
Dpse\GA30020-PB | 1215 | GA30020-PB | 481..832 | 1..365 | 1083 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26309-PA | 762 | GM26309-PA | 1..762 | 32..796 | 3638 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20841-PA | 731 | GD20841-PA | 521..723 | 1..203 | 1014 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23734-PA | 1317 | GJ23734-PA | 524..881 | 1..361 | 1085 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11260-PA | 1252 | GK11260-PA | 531..1247 | 45..792 | 1659 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24821-PA | 1304 | GE24821-PA | 507..1304 | 1..796 | 3351 | 83.4 | Plus |
Translation from 825 to 3215
> GH05455.hyp MGNEESSPGGSPRLSSGYTSSIHQDRDFSAKIQTTEFDLGQAGFTDSGEE REIVYLKEEVKSLRSQLKELNARHYEAMETADSHWVDLEQQYKEREEAQQ AKEASLKQKIAQLQDCLREDSRAATEKIQQLEEGELSLKSCLVRMTKEHR DLLTENRTLQCSLESLMAKMEKEAEHKMPLTEALENERRKTQALMDDLIF AKKVQQNTEDQLRQETDALRTQIFNIKKDYLHIEVTNGELKEEVGTLENK IRQMENQMRDSEERARCLEDELRTKDEQCQLLERKLGVMPEGYSLADELH DSPAKRAKKDEVPSLQAASQGLGVALLDLEGRDFGLPLHKDFQAIACSVK QLADTLLSQSPSEVSLQSKEPAKPAGSEPEGSSWATVQDASSEKIPETGL STVTSLECQGNQETQDNQVIQENPGSLESQVDSEYLESQERNLVSSKKSS YVSVVTSSCRSIVRELAGGSAQKSELHLGESDSRANPQIIRPTDEQEKKI TAVPYSMRQMFNEVCSVDQQHEPELKKKSKKRAKNKKEKHPRPNSHQRKI QRFLFRHIYRPRTLNRTLGFPLQKSLSCSSFHSLLSVHSVHSARSGISLH SLHAEVVNLNWESLASVSFVQTDEVKTLEEEVQVTTQCNEKEMQVQPETI ECGTQVDVGVEQRLLLMPLRTRCFVDLIQGAVDGYLDVAAFRTRLLHLWE GGEDFREHLEFLQDMWIEKSTQKTQESYEGFVAALDCVHNLKLALKPASS ALLQQIEQRIHTRLLLFHNHKAESEFCCTVYIPVERSNSTLFRAKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pif1A-PI | 796 | CG42599-PI | 1..796 | 1..796 | 4054 | 100 | Plus |
Pif1A-PA | 879 | CG33719-PA | 513..875 | 1..363 | 1832 | 100 | Plus |
Pif1A-PG | 1226 | CG42599-PG | 860..1222 | 1..363 | 1832 | 100 | Plus |
Pif1A-PH | 1264 | CG42599-PH | 898..1260 | 1..363 | 1832 | 100 | Plus |