BDGP Sequence Production Resources |
Search the DGRC for GH05617
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 56 |
Well: | 17 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5783-RA |
Protein status: | GH05617.pep: gold |
Preliminary Size: | 1079 |
Sequenced Size: | 971 |
Gene | Date | Evidence |
---|---|---|
CG5783 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5783 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5783 | 2005-01-26 | Blastp of sequenced clone |
CG5783 | 2008-04-29 | Release 5.5 accounting |
CG5783 | 2008-08-15 | Release 5.9 accounting |
CG5783 | 2008-12-18 | 5.12 accounting |
971 bp (971 high quality bases) assembled on 2005-01-26
GenBank Submission: BT021439
> GH05617.complete CGCTCGAAGGGGAAGATTGTTTCGCTCGACCAATATGGGTACTCGATTAG AAGTTATTGGGCTGAAAGATATCCAGGAGTTCCAACAGCTCTACAAGCAA AACTGGCCAAAATATTGCCAGGAATACTACTGCCTTGATAACTTTGTGGA ATTTCTGAAAAAACAGCCCCATATGAGGAATATTAAGATGTACACATTGG ATGCAAAACAAGCCAGAGATGAAGGTCTTTTTGTTATAGTGGATCGCTAT CAACTATTCGTAGGTTGCTTGAACAACACGAACGGCCTTGTTGGAAAAGC TCTGGATTTACTGGACTGGTCGTCGGGTTTGAAATGCAGTTCTATACCCT CCAGACACATTGGTGCCCTGGATAGTCTGGTGGAGTCCAAAAAGTTGAAT CTGGTGTACAGGGACTGCACGAATTTGTTTTTTATGAAAGCCAACGACGC TCTCAAGCTGAAAGTCGAACCTCCATCTGGATTTGTTTTAAAGTCGTTGA GTGTGGCAGATGCTCCATTGGTTAACGCAGAGTGGCCCAATCATCATGAG GGATCTTTGTTCTTCGTAGAAAGGCAGATTCGCCTGTGCGTCAGTGTTGG ATTGTACCAGGAAGACACCCAGGAACTAGTTGCCTGGTGCATTAGGTTAC AAGGCGGCTACTTGGGCGCCCTGCAAGTCAAAGATACACACAAGCGACGC GGATTTGGCAGTGTGGTGACTAGGGAAATAGCATACCGCCTAGCCGTCCA AGGTCACGATGTAATGGCTCTCGTGGGCCCCTCGAATAAGCCGTCATCGG AGATGTTCAGCAAACTGGGATTCCAGGTCATCGATCAATGCTACTGGCTA AGGACGGAACCCACCGGTGGGCAGTTCACATGGCCCGAGGGCGAGTAATT GGTGTTTAAATGTCTGTATTAAAATATTACGACTTTCGGTTGTATATGAA TACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 18155500..18155810 | 643..953 | 1555 | 100 | Plus |
chr2L | 23010047 | chr2L | 18154691..18154932 | 1..242 | 1210 | 100 | Plus |
chr2L | 23010047 | chr2L | 18154989..18155216 | 241..468 | 1140 | 100 | Plus |
chr2L | 23010047 | chr2L | 18155273..18155451 | 469..647 | 895 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18156852..18157164 | 643..955 | 1565 | 100 | Plus |
2L | 23513712 | 2L | 18156043..18156284 | 1..242 | 1210 | 100 | Plus |
2L | 23513712 | 2L | 18156341..18156568 | 241..468 | 1140 | 100 | Plus |
2L | 23513712 | 2L | 18156625..18156803 | 469..647 | 895 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18156852..18157164 | 643..955 | 1565 | 100 | Plus |
2L | 23513712 | 2L | 18156043..18156284 | 1..242 | 1210 | 100 | Plus |
2L | 23513712 | 2L | 18156341..18156568 | 241..468 | 1140 | 100 | Plus |
2L | 23513712 | 2L | 18156625..18156803 | 469..647 | 895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 18155503..18155810 | 646..953 | 100 | Plus | |
chr2L | 18154691..18154931 | 1..241 | 100 | -> | Plus |
chr2L | 18154990..18155216 | 242..468 | 100 | -> | Plus |
chr2L | 18155273..18155449 | 469..645 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5783-RA | 1..864 | 35..898 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5783-RA | 1..864 | 35..898 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5783-RA | 1..864 | 35..898 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5783-RA | 1..864 | 35..898 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5783-RA | 1..864 | 35..898 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5783-RA | 1..953 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5783-RA | 1..953 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5783-RA | 1..953 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5783-RA | 1..953 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5783-RA | 1..953 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18156043..18156283 | 1..241 | 100 | -> | Plus |
2L | 18156342..18156568 | 242..468 | 100 | -> | Plus |
2L | 18156625..18156801 | 469..645 | 100 | -> | Plus |
2L | 18156855..18157162 | 646..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18156043..18156283 | 1..241 | 100 | -> | Plus |
2L | 18156342..18156568 | 242..468 | 100 | -> | Plus |
2L | 18156625..18156801 | 469..645 | 100 | -> | Plus |
2L | 18156855..18157162 | 646..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18156043..18156283 | 1..241 | 100 | -> | Plus |
2L | 18156342..18156568 | 242..468 | 100 | -> | Plus |
2L | 18156625..18156801 | 469..645 | 100 | -> | Plus |
2L | 18156855..18157162 | 646..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 18156043..18156283 | 1..241 | 100 | -> | Plus |
arm_2L | 18156342..18156568 | 242..468 | 100 | -> | Plus |
arm_2L | 18156625..18156801 | 469..645 | 100 | -> | Plus |
arm_2L | 18156855..18157162 | 646..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18156043..18156283 | 1..241 | 100 | -> | Plus |
2L | 18156342..18156568 | 242..468 | 100 | -> | Plus |
2L | 18156625..18156801 | 469..645 | 100 | -> | Plus |
2L | 18156855..18157162 | 646..953 | 100 | Plus |
Translation from 1 to 897
> GH05617.hyp ARRGRLFRSTNMGTRLEVIGLKDIQEFQQLYKQNWPKYCQEYYCLDNFVE FLKKQPHMRNIKMYTLDAKQARDEGLFVIVDRYQLFVGCLNNTNGLVGKA LDLLDWSSGLKCSSIPSRHIGALDSLVESKKLNLVYRDCTNLFFMKANDA LKLKVEPPSGFVLKSLSVADAPLVNAEWPNHHEGSLFFVERQIRLCVSVG LYQEDTQELVAWCIRLQGGYLGALQVKDTHKRRGFGSVVTREIAYRLAVQ GHDVMALVGPSNKPSSEMFSKLGFQVIDQCYWLRTEPTGGQFTWPEGE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5783-PA | 287 | CG5783-PA | 1..287 | 12..298 | 1529 | 100 | Plus |
CG17681-PA | 293 | CG17681-PA | 4..290 | 12..295 | 474 | 35.1 | Plus |
CG15155-PA | 258 | CG15155-PA | 3..256 | 15..290 | 467 | 36.2 | Plus |
CG15155-PB | 257 | CG15155-PB | 3..255 | 15..290 | 451 | 35.8 | Plus |
CG12560-PB | 278 | CG12560-PB | 30..276 | 40..282 | 302 | 31.3 | Plus |
Translation from 34 to 897
> GH05617.pep MGTRLEVIGLKDIQEFQQLYKQNWPKYCQEYYCLDNFVEFLKKQPHMRNI KMYTLDAKQARDEGLFVIVDRYQLFVGCLNNTNGLVGKALDLLDWSSGLK CSSIPSRHIGALDSLVESKKLNLVYRDCTNLFFMKANDALKLKVEPPSGF VLKSLSVADAPLVNAEWPNHHEGSLFFVERQIRLCVSVGLYQEDTQELVA WCIRLQGGYLGALQVKDTHKRRGFGSVVTREIAYRLAVQGHDVMALVGPS NKPSSEMFSKLGFQVIDQCYWLRTEPTGGQFTWPEGE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14492-PA | 284 | GF14492-PA | 2..284 | 4..287 | 1174 | 74.6 | Plus |
Dana\GF14491-PA | 271 | GF14491-PA | 2..271 | 3..287 | 587 | 40.4 | Plus |
Dana\GF14490-PA | 293 | GF14490-PA | 9..293 | 6..287 | 505 | 36 | Plus |
Dana\GF15332-PA | 277 | GF15332-PA | 30..275 | 29..271 | 313 | 31.9 | Plus |
Dana\GF19707-PA | 212 | GF19707-PA | 52..208 | 115..271 | 189 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21112-PA | 287 | GG21112-PA | 1..287 | 1..287 | 1406 | 88.2 | Plus |
Dere\GG21109-PA | 293 | GG21109-PA | 4..293 | 1..287 | 477 | 35.7 | Plus |
Dere\GG21111-PA | 257 | GG21111-PA | 3..256 | 4..279 | 449 | 32.7 | Plus |
Dere\GG23486-PA | 281 | GG23486-PA | 9..280 | 18..275 | 308 | 28.4 | Plus |
Dere\GG23485-PA | 101 | GG23485-PA | 5..89 | 186..271 | 178 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11205-PA | 288 | GH11205-PA | 1..288 | 1..287 | 995 | 59.7 | Plus |
Dgri\GH11204-PA | 290 | GH11204-PA | 4..290 | 2..287 | 731 | 47.7 | Plus |
Dgri\GH11202-PA | 292 | GH11202-PA | 13..292 | 12..287 | 469 | 36.3 | Plus |
Dgri\GH11463-PA | 280 | GH11463-PA | 36..277 | 31..271 | 347 | 35 | Plus |
Dgri\GH11464-PA | 279 | GH11464-PA | 20..277 | 14..271 | 339 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5783-PA | 287 | CG5783-PA | 1..287 | 1..287 | 1529 | 100 | Plus |
CG17681-PA | 293 | CG17681-PA | 4..290 | 1..284 | 474 | 35.1 | Plus |
CG15155-PA | 258 | CG15155-PA | 3..256 | 4..279 | 467 | 36.2 | Plus |
CG15155-PB | 257 | CG15155-PB | 3..255 | 4..279 | 451 | 35.8 | Plus |
CG12560-PB | 278 | CG12560-PB | 30..276 | 29..271 | 302 | 31.3 | Plus |
CG12560-PC | 272 | CG12560-PC | 30..270 | 29..271 | 282 | 30.5 | Plus |
Glyat-PA | 278 | CG34010-PA | 45..271 | 49..271 | 199 | 26.9 | Plus |
CG14615-PB | 304 | CG14615-PB | 115..301 | 92..276 | 193 | 27.5 | Plus |
CG14615-PA | 304 | CG14615-PA | 115..301 | 92..276 | 193 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18127-PA | 287 | GI18127-PA | 1..287 | 1..287 | 992 | 61 | Plus |
Dmoj\GI18126-PA | 285 | GI18126-PA | 2..285 | 4..287 | 774 | 47.9 | Plus |
Dmoj\GI18125-PA | 292 | GI18125-PA | 8..292 | 7..287 | 492 | 38 | Plus |
Dmoj\GI16891-PA | 265 | GI16891-PA | 21..263 | 18..271 | 312 | 33.5 | Plus |
Dmoj\GI16884-PA | 213 | GI16884-PA | 92..204 | 155..268 | 192 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18697-PA | 287 | GL18697-PA | 1..287 | 1..287 | 1209 | 73.9 | Plus |
Dper\GL18696-PA | 286 | GL18696-PA | 4..286 | 5..287 | 689 | 48.6 | Plus |
Dper\GL18695-PA | 293 | GL18695-PA | 9..293 | 6..287 | 515 | 38.5 | Plus |
Dper\GL18506-PA | 274 | GL18506-PA | 29..272 | 31..271 | 305 | 33.2 | Plus |
Dper\GL18505-PA | 138 | GL18505-PA | 7..126 | 150..271 | 206 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19124-PA | 287 | GA19124-PA | 1..287 | 1..287 | 1191 | 72.8 | Plus |
Dpse\GA25759-PA | 285 | GA25759-PA | 4..285 | 5..287 | 762 | 51.9 | Plus |
Dpse\GA14610-PA | 293 | GA14610-PA | 9..293 | 6..287 | 511 | 38.1 | Plus |
Dpse\GA25663-PA | 286 | GA25663-PA | 161..284 | 147..271 | 273 | 48 | Plus |
Dpse\GA13114-PA | 305 | GA13114-PA | 118..304 | 93..277 | 193 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17269-PA | 287 | GM17269-PA | 1..287 | 1..287 | 1480 | 94.8 | Plus |
Dsec\GM17267-PA | 291 | GM17267-PA | 10..291 | 9..287 | 473 | 35.7 | Plus |
Dsec\GM17268-PA | 258 | GM17268-PA | 4..256 | 5..279 | 453 | 34.9 | Plus |
Dsec\GM13211-PA | 277 | GM13211-PA | 30..275 | 29..271 | 295 | 31.2 | Plus |
Dsec\GM13208-PA | 161 | GM13208-PA | 39..154 | 155..271 | 190 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24134-PA | 287 | GD24134-PA | 1..287 | 1..287 | 1476 | 94.8 | Plus |
Dsim\GD24132-PA | 395 | GD24132-PA | 4..276 | 1..271 | 447 | 34.3 | Plus |
Dsim\GD24133-PA | 250 | GD24133-PA | 4..248 | 5..279 | 444 | 34.9 | Plus |
Dsim\GD22448-PA | 278 | GD22448-PA | 30..276 | 29..271 | 301 | 31.6 | Plus |
Dsim\GD22447-PA | 103 | GD22447-PA | 12..96 | 186..271 | 177 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17752-PA | 287 | GJ17752-PA | 1..287 | 1..287 | 1019 | 65.2 | Plus |
Dvir\GJ17751-PA | 285 | GJ17751-PA | 2..285 | 4..287 | 803 | 50.4 | Plus |
Dvir\GJ17749-PA | 292 | GJ17749-PA | 1..289 | 1..284 | 500 | 40.2 | Plus |
Dvir\GJ17205-PA | 281 | GJ17205-PA | 126..279 | 119..271 | 303 | 42.6 | Plus |
Dvir\GJ17204-PA | 352 | GJ17204-PA | 205..346 | 129..271 | 212 | 32.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15541-PA | 288 | GK15541-PA | 1..288 | 1..287 | 1056 | 65.6 | Plus |
Dwil\GK15540-PA | 235 | GK15540-PA | 4..232 | 5..254 | 528 | 42.1 | Plus |
Dwil\GK15539-PA | 289 | GK15539-PA | 9..289 | 6..287 | 511 | 36.7 | Plus |
Dwil\GK15128-PA | 339 | GK15128-PA | 212..335 | 147..271 | 250 | 40.8 | Plus |
Dwil\GK16280-PA | 302 | GK16280-PA | 115..302 | 93..278 | 163 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13184-PA | 287 | GE13184-PA | 1..287 | 1..287 | 1388 | 89.2 | Plus |
Dyak\GE13183-PA | 279 | GE13183-PA | 3..277 | 4..279 | 582 | 40.6 | Plus |
Dyak\GE13182-PA | 293 | GE13182-PA | 4..293 | 1..287 | 490 | 35.4 | Plus |
Dyak\GE11237-PA | 278 | GE11237-PA | 30..276 | 29..271 | 289 | 29.2 | Plus |
Dyak\GE11235-PA | 264 | GE11235-PA | 30..262 | 29..271 | 270 | 31.8 | Plus |