Clone GH05731 Report

Search the DGRC for GH05731

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:57
Well:31
Vector:pOT2
Associated Gene/TranscriptCG9689-RA
Protein status:GH05731.pep: gold
Preliminary Size:856
Sequenced Size:705

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9689 2001-01-01 Release 2 assignment
CG9689 2002-03-19 Blastp of sequenced clone
CG9689 2003-01-01 Sim4 clustering to Release 3
CG9689 2008-04-29 Release 5.5 accounting

Clone Sequence Records

GH05731.complete Sequence

705 bp (705 high quality bases) assembled on 2002-03-19

GenBank Submission: AY094677

> GH05731.complete
CGATACACGATATTCAAGATTTGAGATTCGAGATCCACAATTGCGATGAC
TAATTCATTGACCATCGCCGTCTTTTTGGCCAGCCTGTGCCTCTTTGCCA
GTTGTGGTCAAATGCAGGCAGCCTCCATTGTCTGCGGATCGGAGGCTAAG
TCTGCAGAGGATGGTGATTCGGTGACCACTCCCAGTACCAGTGAGGTCAA
CAAATTCGTCCACAGCCTGCAATGCACTCTGGAGAAGGCCAAGCCCTGGA
TAGCCAATATCGAGAAGGAGGCCAAGATCTTGGAGGAGAAGGCCAGGGAT
GCCACCATATCGCTCTTCCAGCGCATAAATAAACTGGTCAATGTGCTCGC
CTCACCGGTTAAATTCGAAAAGGATAAGGAAAAGGATAAGGATGAGCAGA
AGGAACCGGAGGAGGTCACCACCACGACCACCCCTTCCACATCGGAGGCT
TCGAGTTCCTCCAAAAACGATCTTAAGGAGGAACTAACCACTTCTGCGCC
GCCAGTTCACTTGGACTGGCTGGAGGATCATGCCAATGAGGTGGACTACA
TTCCAGAGAAGAATTAGTGAAGCACTTAGTTAAGCACTATGCTAATATAT
ATGTATACTAATTAATAAATTATGTTGCTCTTTATTCGATGAGCCTTTCC
TATTTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAA

GH05731.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:22:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG9689-RA 1029 CG9689-RA 116..775 1..660 3300 100 Plus
CG9689.a 1740 CG9689.a 116..775 1..660 3300 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:41:31
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 9773689..9774346 1..658 3290 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:33:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:41:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9881983..9882642 1..660 3300 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:52:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 9890081..9890740 1..660 3300 100 Plus
Blast to na_te.dros performed on 2019-03-16 06:41:29 has no hits.

GH05731.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:42:25 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 9773689..9774346 1..658 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:18:54 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 1..522 46..567 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:31:50 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 1..522 46..567 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:40:55 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 1..522 46..567 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:04:55 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 1..522 46..567 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:19:31 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 1..522 46..567 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:57:48 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 1..658 1..658 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:31:50 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 1..658 1..658 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:40:55 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 31..688 1..658 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:04:55 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 1..658 1..658 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:19:31 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 31..688 1..658 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:42:25 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
X 9881983..9882640 1..658 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:42:25 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
X 9881983..9882640 1..658 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:42:25 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
X 9881983..9882640 1..658 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:40:55 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9776016..9776673 1..658 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:38:42 Download gff for GH05731.complete
Subject Subject Range Query Range Percent Splice Strand
X 9890081..9890738 1..658 100   Plus

GH05731.hyp Sequence

Translation from 45 to 566

> GH05731.hyp
MTNSLTIAVFLASLCLFASCGQMQAASIVCGSEAKSAEDGDSVTTPSTSE
VNKFVHSLQCTLEKAKPWIANIEKEAKILEEKARDATISLFQRINKLVNV
LASPVKFEKDKEKDKDEQKEPEEVTTTTTPSTSEASSSSKNDLKEELTTS
APPVHLDWLEDHANEVDYIPEKN*

GH05731.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:53:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG9689-PB 173 CG9689-PB 1..173 1..173 878 100 Plus
CG9689-PA 173 CG9689-PA 1..173 1..173 878 100 Plus

GH05731.pep Sequence

Translation from 45 to 566

> GH05731.pep
MTNSLTIAVFLASLCLFASCGQMQAASIVCGSEAKSAEDGDSVTTPSTSE
VNKFVHSLQCTLEKAKPWIANIEKEAKILEEKARDATISLFQRINKLVNV
LASPVKFEKDKEKDKDEQKEPEEVTTTTTPSTSEASSSSKNDLKEELTTS
APPVHLDWLEDHANEVDYIPEKN*

GH05731.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:57:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19139-PA 169 GF19139-PA 1..166 1..171 478 64 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:57:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18330-PA 177 GG18330-PA 1..176 1..172 644 88.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:57:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11808-PA 168 GH11808-PA 2..104 1..99 226 43.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:49:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG9689-PB 173 CG9689-PB 1..173 1..173 878 100 Plus
CG9689-PA 173 CG9689-PA 1..173 1..173 878 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:57:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15990-PA 169 GI15990-PA 1..126 1..133 246 41.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16380-PA 184 GL16380-PA 27..175 25..167 330 53.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22359-PA 186 GA22359-PA 27..177 25..167 308 52.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:57:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11395-PA 173 GM11395-PA 1..173 1..173 860 96.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:57:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11995-PA 49 GD11995-PA 1..39 1..39 164 92.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:57:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18719-PA 169 GJ18719-PA 3..103 1..105 222 43 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:57:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25362-PA 183 GK25362-PA 10..114 1..99 212 43.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:57:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17816-PA 175 GE17816-PA 1..175 1..173 738 90.9 Plus