![]() | BDGP Sequence Production Resources |
Search the DGRC for GH05942
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 59 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3529-RB |
Protein status: | GH05942.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2103 |
Gene | Date | Evidence |
---|---|---|
CG3529 | 2001-01-01 | Release 2 assignment |
CG3529 | 2001-09-19 | Blastp of sequenced clone |
CG3529 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3529 | 2008-04-29 | Release 5.5 accounting |
CG3529 | 2008-08-15 | Release 5.9 accounting |
CG3529 | 2008-12-18 | 5.12 accounting |
2103 bp (2103 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058297
> GH05942.complete ATAAACATTTCATCCAGGTGAACAAAAAGTAAATAAAGAACAATTTTAAC CGCACTGCAACCCAACGGCGAGCATTAATAAGAAACTTCTCCACGATGGC TTCATTTTTCAACGTTGGCGCCTTGGGAAATGTTTTCTCCACTCCAGTTG GCCAGCGCATAGAGGCCGCCACCGATGCCAACCTGGCCTCGGAGAACTGG GCCGCCAACATGGAGATCTGCGACATGATCAACGAATCCTCCGACACTGC ACGCGATGCTATGCGTGCCATTCGCAAACGCCTCTCCCAGAACGCCGGCA AAAACAACCAGGTGGTGATGTACACGCTGACCGTCCTGGAGACATGCGTG AAGAACTGCGGCAAGGCCTTCCATGTCCTGGTGGCCCAGAAGGACTTCAT CAACGAGCTGGTCAAGCTGATTGGGCCCAAGAACGATCCACCAGCCGCCA TGCAGGAGAAGGTTCTCAGTCTGATACAAATCTGGGCGGATGCGTTTAAG AACCAACCGGATCTCAACGGCGTCACCCAGATGTACATGGAATTGAAAAA CAAGGGCATCGAGTTTCCAGCCAACGATCTGGATGCCATGGCACCCATTT ACACGCCACAGAGGAGTGTTCCCGAGATGCCCCCTCAGCTGGTGGCCGCT CAGCAGCACACAATCTCGCCTCAACACATGGCTGCCGCTGCTGCCGCCGC AGCTGCAGCCGCAGCTCCACCCAGCACAGGTCCTTTGCATTTGACTCCCG AGCAAGCGGCTAAGCTGCGCTCCGAACTGGAGATCGTTAGCAACAATATG TCCATCCTCAGCGAGATGCTCAGTGTTCTGAAGCCCGGCCAGGAGTCGCC CGATGACTATGCCCTGCTCAATGAGCTCACCTCGACCTGCAAGGAGATGC AGTCTCGCATCGTGGATCTGATTGGACGTGTCCAGGACGACGAGCTCACC GCGGAGTTCCTGCGCATCAATGACGAGCTGAACAATGTGTTCTTGCGCCA CCAGCGTTACGAGAAAAATCGTTCGCAGGGCCAGGGTGCTGGTGTTACCT CGCCCTCGGCTGTGCTGGGCGCAGCCATGGGCCTGCCCGGTGTGGGAGCA GCTGGAGCAGGAGCCACCACGGTGGCTACGCTACCACCTCCGCCCACAAC TACCGCCGTGAGCAATACGCCGCAAAGTGACCAACTGCTGATCGATCTAA TCGAAAGCAGCGAGGAAGCCCAACTGCCACAGAGTTTGGGACAGATCAGC CTGGGTGGTGGAGCACCCATTGGGGTGCAGAGGAGCGCACGACCTGCCGA TGAATTCGATATGCTGGCACAGTCGCGCACCGATGGCAACCATAAATCGG ACTTGCTGCGGGACATTCCCTCGGTGGACGCTGCTGCTGGGAGTGTGACT GCCACCGCCTCGCCTTACAAACCAAATCAACCGCAGCAGGCACAGCGCTC AGCCGGCGAACCGCCGGTGGTAAGTAAATCGACGAAAGAGAATGAGATCG ACGAGATGGAGGCGTGGTTGGGCAGCTCACACATCGAGGGAATTGAGGAG CTGACCAGCTCGGAGTTTGACAAATTCCTAGAGGAGAGAGCCGCTGCCGC CGAGAATCTTCCAACGATCAGTGCATCGAACTCCGCCGCCAGTGCCACGA CAGGATCGGCAGGAGCCGATAGCTTACGAAAGACACCAAAGAAACCGGGC GCCGAAGAGGATCTGCTCGCGCTCTGAGTGATCTCCGCCAGCACCATCAT CGGCTCTAATTGTTTACTCTTTCAAATGTTATACACACCCTAACATACTT ATCCGTAACGTCTATTTGATAGCAGATACATAGTAACACTTTATGTAAAA TGCTTTTATTTTTTACAAAAACAGCAACGATAACTATTGATTATATTCCA AAAAAACAAGCGATCTTTTGTTGGTCTAATTGTAAGCCACGTCTACACAT TGATGGTAATTTAATGTATTACGTTACAAGTCTATTTGTTGTTTATTTAT ACATACATTATAAAGCTAATTTATTTTACAAAATCGAAAAGAAAAACTAA AACAAAATGGAAATACATTTCAAGCACATACCGAAAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3529-RB | 2172 | CG3529-RB | 58..2141 | 1..2084 | 10420 | 100 | Plus |
CG3529.b | 1991 | CG3529.b | 69..1991 | 162..2084 | 9615 | 100 | Plus |
CG3529.a | 2122 | CG3529.a | 48..1516 | 1..1469 | 7345 | 100 | Plus |
CG3529.a | 2122 | CG3529.a | 1517..2122 | 1479..2084 | 3030 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9440776..9441504 | 614..1342 | 3615 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 9442108..9442661 | 1530..2083 | 2755 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 9440262..9440715 | 161..614 | 2240 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 9438779..9438940 | 1..162 | 810 | 100 | Plus |
chr3L | 24539361 | chr3L | 9441565..9441700 | 1343..1478 | 620 | 97.1 | Plus |
chr3L | 24539361 | chr3L | 9441894..9441944 | 1479..1529 | 255 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 9448900..9449628 | 614..1342 | 3645 | 100 | Plus |
3L | 28110227 | 3L | 9450232..9450786 | 1530..2084 | 2775 | 100 | Plus |
3L | 28110227 | 3L | 9448386..9448839 | 161..614 | 2270 | 100 | Plus |
3L | 28110227 | 3L | 9446901..9447062 | 1..162 | 810 | 100 | Plus |
3L | 28110227 | 3L | 9449689..9449824 | 1343..1478 | 680 | 100 | Plus |
3L | 28110227 | 3L | 9450018..9450068 | 1479..1529 | 255 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 9442000..9442728 | 614..1342 | 3645 | 100 | Plus |
3L | 28103327 | 3L | 9443332..9443886 | 1530..2084 | 2775 | 100 | Plus |
3L | 28103327 | 3L | 9441486..9441939 | 161..614 | 2270 | 100 | Plus |
3L | 28103327 | 3L | 9440001..9440162 | 1..162 | 810 | 100 | Plus |
3L | 28103327 | 3L | 9442789..9442924 | 1343..1478 | 680 | 100 | Plus |
3L | 28103327 | 3L | 9443118..9443168 | 1479..1529 | 255 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
S-element | 1736 | S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). | 1548..1634 | 1984..2072 | 125 | 64.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9438779..9438940 | 1..162 | 100 | -> | Plus |
chr3L | 9440264..9440715 | 163..614 | 99 | -> | Plus |
chr3L | 9440777..9441504 | 615..1342 | 99 | -> | Plus |
chr3L | 9441565..9441700 | 1343..1478 | 97 | -> | Plus |
chr3L | 9441894..9441944 | 1479..1529 | 100 | -> | Plus |
chr3L | 9442108..9442661 | 1530..2083 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3529-RB | 1..1632 | 96..1727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3529-RB | 1..1632 | 96..1727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3529-RB | 1..1632 | 96..1727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3529-RB | 1..1632 | 96..1727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3529-RB | 1..1632 | 96..1727 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3529-RB | 27..2109 | 1..2083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3529-RB | 27..2109 | 1..2083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3529-RB | 38..2120 | 1..2083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3529-RB | 27..2109 | 1..2083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3529-RB | 38..2120 | 1..2083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9446901..9447062 | 1..162 | 100 | -> | Plus |
3L | 9448388..9448839 | 163..614 | 100 | -> | Plus |
3L | 9448901..9449628 | 615..1342 | 100 | -> | Plus |
3L | 9449689..9449824 | 1343..1478 | 100 | -> | Plus |
3L | 9450018..9450068 | 1479..1529 | 100 | -> | Plus |
3L | 9450232..9450785 | 1530..2083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9446901..9447062 | 1..162 | 100 | -> | Plus |
3L | 9448388..9448839 | 163..614 | 100 | -> | Plus |
3L | 9448901..9449628 | 615..1342 | 100 | -> | Plus |
3L | 9449689..9449824 | 1343..1478 | 100 | -> | Plus |
3L | 9450018..9450068 | 1479..1529 | 100 | -> | Plus |
3L | 9450232..9450785 | 1530..2083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9446901..9447062 | 1..162 | 100 | -> | Plus |
3L | 9448388..9448839 | 163..614 | 100 | -> | Plus |
3L | 9448901..9449628 | 615..1342 | 100 | -> | Plus |
3L | 9449689..9449824 | 1343..1478 | 100 | -> | Plus |
3L | 9450018..9450068 | 1479..1529 | 100 | -> | Plus |
3L | 9450232..9450785 | 1530..2083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9440001..9440162 | 1..162 | 100 | -> | Plus |
arm_3L | 9441488..9441939 | 163..614 | 100 | -> | Plus |
arm_3L | 9442001..9442728 | 615..1342 | 100 | -> | Plus |
arm_3L | 9442789..9442924 | 1343..1478 | 100 | -> | Plus |
arm_3L | 9443118..9443168 | 1479..1529 | 100 | -> | Plus |
arm_3L | 9443332..9443885 | 1530..2083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9440001..9440162 | 1..162 | 100 | -> | Plus |
3L | 9442789..9442924 | 1343..1478 | 100 | -> | Plus |
3L | 9443118..9443168 | 1479..1529 | 100 | -> | Plus |
3L | 9441488..9441939 | 163..614 | 100 | -> | Plus |
3L | 9442001..9442728 | 615..1342 | 100 | -> | Plus |
3L | 9443332..9443885 | 1530..2083 | 100 | Plus |
Translation from 95 to 1726
> GH05942.pep MASFFNVGALGNVFSTPVGQRIEAATDANLASENWAANMEICDMINESSD TARDAMRAIRKRLSQNAGKNNQVVMYTLTVLETCVKNCGKAFHVLVAQKD FINELVKLIGPKNDPPAAMQEKVLSLIQIWADAFKNQPDLNGVTQMYMEL KNKGIEFPANDLDAMAPIYTPQRSVPEMPPQLVAAQQHTISPQHMAAAAA AAAAAAAPPSTGPLHLTPEQAAKLRSELEIVSNNMSILSEMLSVLKPGQE SPDDYALLNELTSTCKEMQSRIVDLIGRVQDDELTAEFLRINDELNNVFL RHQRYEKNRSQGQGAGVTSPSAVLGAAMGLPGVGAAGAGATTVATLPPPP TTTAVSNTPQSDQLLIDLIESSEEAQLPQSLGQISLGGGAPIGVQRSARP ADEFDMLAQSRTDGNHKSDLLRDIPSVDAAAGSVTATASPYKPNQPQQAQ RSAGEPPVVSKSTKENEIDEMEAWLGSSHIEGIEELTSSEFDKFLEERAA AAENLPTISASNSAASATTGSAGADSLRKTPKKPGAEEDLLAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25134-PA | 529 | GF25134-PA | 1..529 | 1..543 | 2375 | 89.7 | Plus |
Dana\GF15830-PA | 700 | GF15830-PA | 1..144 | 7..157 | 203 | 27.6 | Plus |
Dana\GF13888-PA | 763 | GF13888-PA | 1..149 | 13..165 | 190 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15377-PA | 541 | GG15377-PA | 1..541 | 1..543 | 2778 | 97.4 | Plus |
Dere\GG23682-PA | 687 | GG23682-PA | 1..144 | 7..157 | 205 | 28.3 | Plus |
Dere\GG24878-PA | 762 | GG24878-PA | 1..149 | 13..165 | 187 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15236-PA | 565 | GH15236-PA | 1..565 | 1..543 | 2159 | 77.9 | Plus |
Dgri\GH13592-PA | 742 | GH13592-PA | 1..144 | 7..157 | 252 | 32.2 | Plus |
Dgri\GH11165-PA | 738 | GH11165-PA | 1..149 | 13..165 | 177 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3529-PB | 543 | CG3529-PB | 1..543 | 1..543 | 2735 | 100 | Plus |
CG3529-PD | 540 | CG3529-PD | 1..540 | 1..543 | 2708 | 99.4 | Plus |
CG3529-PC | 526 | CG3529-PC | 1..526 | 1..543 | 2619 | 96.9 | Plus |
Stam-PA | 689 | CG6521-PA | 7..173 | 15..187 | 200 | 27 | Plus |
Hrs-PC | 760 | CG2903-PC | 1..149 | 13..165 | 177 | 30.5 | Plus |
Hrs-PB | 760 | CG2903-PB | 1..149 | 13..165 | 177 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11944-PA | 546 | GI11944-PA | 1..546 | 1..543 | 2109 | 78.7 | Plus |
Dmoj\GI23591-PA | 725 | GI23591-PA | 14..144 | 22..157 | 232 | 32.1 | Plus |
Dmoj\GI17877-PA | 750 | GI17877-PA | 1..149 | 13..165 | 186 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17879-PA | 467 | GL17879-PA | 1..393 | 1..389 | 1714 | 86.9 | Plus |
Dper\GL19123-PA | 683 | GL19123-PA | 14..144 | 22..157 | 217 | 29.9 | Plus |
Dper\GL26577-PA | 765 | GL26577-PA | 1..149 | 13..165 | 181 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17503-PA | 552 | GA17503-PA | 1..552 | 1..543 | 2232 | 83.2 | Plus |
Dpse\GA19660-PA | 683 | GA19660-PA | 14..144 | 22..157 | 221 | 29.9 | Plus |
Dpse\GA15506-PA | 748 | GA15506-PA | 1..149 | 13..165 | 192 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25149-PA | 536 | GM25149-PA | 1..536 | 1..543 | 2781 | 97.8 | Plus |
Dsec\GM18758-PA | 692 | GM18758-PA | 1..144 | 7..157 | 207 | 28.3 | Plus |
Dsec\GM18359-PA | 747 | GM18359-PA | 1..149 | 13..165 | 188 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14183-PA | 532 | GD14183-PA | 1..532 | 10..543 | 2765 | 98.3 | Plus |
Dsim\GD23740-PA | 690 | GD23740-PA | 1..144 | 7..157 | 207 | 28.3 | Plus |
Dsim\GD23175-PA | 759 | GD23175-PA | 1..149 | 13..165 | 188 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12170-PA | 552 | GJ12170-PA | 1..552 | 1..543 | 2133 | 81 | Plus |
Dvir\GJ20786-PA | 721 | GJ20786-PA | 1..144 | 7..157 | 247 | 32.2 | Plus |
Dvir\GJ17377-PA | 734 | GJ17377-PA | 1..149 | 13..165 | 184 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17578-PA | 561 | GK17578-PA | 1..561 | 1..543 | 2016 | 73.6 | Plus |
Dwil\GK18440-PA | 711 | GK18440-PA | 14..147 | 22..157 | 198 | 29.5 | Plus |
Dwil\GK24576-PA | 738 | GK24576-PA | 1..149 | 13..165 | 184 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20841-PA | 541 | GE20841-PA | 1..541 | 1..543 | 2788 | 97.6 | Plus |
Dyak\GE18494-PA | 689 | GE18494-PA | 1..144 | 7..157 | 213 | 28.9 | Plus |
Dyak\GE18175-PA | 765 | GE18175-PA | 1..149 | 13..165 | 188 | 30.5 | Plus |
Translation from 95 to 1726
> GH05942.hyp MASFFNVGALGNVFSTPVGQRIEAATDANLASENWAANMEICDMINESSD TARDAMRAIRKRLSQNAGKNNQVVMYTLTVLETCVKNCGKAFHVLVAQKD FINELVKLIGPKNDPPAAMQEKVLSLIQIWADAFKNQPDLNGVTQMYMEL KNKGIEFPANDLDAMAPIYTPQRSVPEMPPQLVAAQQHTISPQHMAAAAA AAAAAAAPPSTGPLHLTPEQAAKLRSELEIVSNNMSILSEMLSVLKPGQE SPDDYALLNELTSTCKEMQSRIVDLIGRVQDDELTAEFLRINDELNNVFL RHQRYEKNRSQGQGAGVTSPSAVLGAAMGLPGVGAAGAGATTVATLPPPP TTTAVSNTPQSDQLLIDLIESSEEAQLPQSLGQISLGGGAPIGVQRSARP ADEFDMLAQSRTDGNHKSDLLRDIPSVDAAAGSVTATASPYKPNQPQQAQ RSAGEPPVVSKSTKENEIDEMEAWLGSSHIEGIEELTSSEFDKFLEERAA AAENLPTISASNSAASATTGSAGADSLRKTPKKPGAEEDLLAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3529-PB | 543 | CG3529-PB | 1..543 | 1..543 | 2735 | 100 | Plus |
CG3529-PD | 540 | CG3529-PD | 1..540 | 1..543 | 2708 | 99.4 | Plus |
CG3529-PC | 526 | CG3529-PC | 1..526 | 1..543 | 2619 | 96.9 | Plus |
Stam-PA | 689 | CG6521-PA | 7..173 | 15..187 | 200 | 27 | Plus |
Hrs-PC | 760 | CG2903-PC | 1..149 | 13..165 | 177 | 30.5 | Plus |