BDGP Sequence Production Resources |
Search the DGRC for GH05949
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 59 |
Well: | 49 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17294-RA |
Protein status: | GH05949.pep: gold |
Preliminary Size: | 992 |
Sequenced Size: | 1010 |
Gene | Date | Evidence |
---|---|---|
CG17294 | 2001-01-01 | Release 2 assignment |
CG17294 | 2001-07-04 | Blastp of sequenced clone |
CG17294 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17294 | 2008-04-29 | Release 5.5 accounting |
CG17294 | 2008-08-15 | Release 5.9 accounting |
CG17294 | 2008-12-18 | 5.12 accounting |
1010 bp (1010 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047550
> GH05949.complete GAACGAGAAGCTTTCAACAGTTGAGAAAGATGTCTATTAAAGGAGCACTC ATTGATCTCAGTGGCACCTTGCATGTGGAGGATGAACCTACTCCGAATGC TGTCGAGGCGTTAAAAAGATTGCGTGACTCTGGCGTACTGGTGAAATTCG TTACAAACACCACGAAGGATTCAAAGGCCACTCTTCACGAACGGCTATGC AGGATTGGCTTCCAACTTGACGCCTCTGAGATCTACAGCTCCTTGAGTGC CGCAGTCTCGTATGTGGAAAATGAGAGACTAAATCCGTACTATATTCTGT CTGAGGATGCACGACAGGACTTTCCGCCGGAGGACACTAGGCGCTATAAG GATTCAGTTGTAATCGGTCTGGCACCCAAGGCCTTTAACTATGAACAGCT GAATGAGGCTTTTAACGTTCTATTGGAAAACAAGAATCACAAACTGATCG CCGTGCATCAGGGTAAGTACTACAAACGAGCAGAAGGCCTAGCCTTGGGC CCAGGGTGCTTTGTCAAGGGTTTGGAGTTCGCTACAGGACGAACTGCCAA AGTGATTGGCAAGCCCAATCCTTATTTCTTCGAAGGAGCTCTGGCTGGTC GGGATCCAGCCTCATGCGTTATGATTGGAGATGATGCCAATGATGACATA GTGGGCGCCATGAGCATGGGCATGCAGGGAATTCTGGTCAAGACCGGCAA ATATCTGCCGGATGTCAAACCATCCCCACCTCCAACAGCGTTGTTGGAAA ACTTTGCAGAGGCTGTCGATTGGATTATACAGAAAAACCAATCTTAGGCT TTATTGGGCTTCTGCAAATGTTTATCGTGTTTAAAACATAGATACTGACG AATTTTTTATTTAAAATAGTTACTTAAAAAGACTTTACTGATATAGGTAA GGCTTAGATATAATTAAATGCTCAAAATAAGTTCAGTTCTGATTATAAAC TTTTCATGTGGAACATAATAAAGGACCCGTTTTTAAAGTGTGAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17294-RA | 1075 | CG17294-RA | 57..1050 | 1..994 | 4970 | 100 | Plus |
Aats-ala-RA | 3305 | Aats-ala-RA | 3249..3305 | 994..938 | 285 | 100 | Minus |
Aats-ala.a | 3373 | Aats-ala.a | 3317..3373 | 994..938 | 285 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8376758..8377117 | 633..992 | 1800 | 100 | Plus |
chr2L | 23010047 | chr2L | 8376134..8376432 | 117..415 | 1495 | 100 | Plus |
chr2L | 23010047 | chr2L | 8376488..8376705 | 416..633 | 1090 | 100 | Plus |
chr2L | 23010047 | chr2L | 8375966..8376083 | 1..118 | 590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8377847..8378208 | 633..994 | 1810 | 100 | Plus |
2L | 23513712 | 2L | 8377223..8377521 | 117..415 | 1495 | 100 | Plus |
2L | 23513712 | 2L | 8377577..8377794 | 416..633 | 1090 | 100 | Plus |
2L | 23513712 | 2L | 8377055..8377172 | 1..118 | 590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8377847..8378208 | 633..994 | 1810 | 100 | Plus |
2L | 23513712 | 2L | 8377223..8377521 | 117..415 | 1495 | 100 | Plus |
2L | 23513712 | 2L | 8377577..8377794 | 416..633 | 1090 | 100 | Plus |
2L | 23513712 | 2L | 8377055..8377172 | 1..118 | 590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
opus | 7521 | opus OPUS 7521bp | 4019..4114 | 87..179 | 132 | 63.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8376136..8376432 | 119..415 | 100 | -> | Plus |
chr2L | 8376488..8376704 | 416..632 | 100 | -> | Plus |
chr2L | 8375966..8376083 | 1..118 | 100 | -> | Plus |
chr2L | 8376758..8377117 | 633..992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17294-RA | 1..768 | 30..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17294-RA | 1..768 | 30..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17294-RA | 1..768 | 30..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17294-RA | 1..768 | 30..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17294-RA | 1..768 | 30..797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17294-RA | 5..996 | 1..992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17294-RA | 5..996 | 1..992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17294-RA | 21..1012 | 1..992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17294-RA | 5..996 | 1..992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17294-RA | 21..1012 | 1..992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8377055..8377172 | 1..118 | 100 | -> | Plus |
2L | 8377225..8377521 | 119..415 | 100 | -> | Plus |
2L | 8377577..8377793 | 416..632 | 100 | -> | Plus |
2L | 8377847..8378206 | 633..992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8377055..8377172 | 1..118 | 100 | -> | Plus |
2L | 8377225..8377521 | 119..415 | 100 | -> | Plus |
2L | 8377577..8377793 | 416..632 | 100 | -> | Plus |
2L | 8377847..8378206 | 633..992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8377055..8377172 | 1..118 | 100 | -> | Plus |
2L | 8377225..8377521 | 119..415 | 100 | -> | Plus |
2L | 8377577..8377793 | 416..632 | 100 | -> | Plus |
2L | 8377847..8378206 | 633..992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8377225..8377521 | 119..415 | 100 | -> | Plus |
arm_2L | 8377577..8377793 | 416..632 | 100 | -> | Plus |
arm_2L | 8377055..8377172 | 1..118 | 100 | -> | Plus |
arm_2L | 8377847..8378206 | 633..992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8377577..8377793 | 416..632 | 100 | -> | Plus |
2L | 8377225..8377521 | 119..415 | 100 | -> | Plus |
2L | 8377847..8378206 | 633..992 | 100 | Plus | |
2L | 8377055..8377172 | 1..118 | 100 | -> | Plus |
Translation from 2 to 796
> GH05949.hyp TRSFQQLRKMSIKGALIDLSGTLHVEDEPTPNAVEALKRLRDSGVLVKFV TNTTKDSKATLHERLCRIGFQLDASEIYSSLSAAVSYVENERLNPYYILS EDARQDFPPEDTRRYKDSVVIGLAPKAFNYEQLNEAFNVLLENKNHKLIA VHQGKYYKRAEGLALGPGCFVKGLEFATGRTAKVIGKPNPYFFEGALAGR DPASCVMIGDDANDDIVGAMSMGMQGILVKTGKYLPDVKPSPPPTALLEN FAEAVDWIIQKNQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17294-PA | 255 | CG17294-PA | 1..255 | 10..264 | 1318 | 100 | Plus |
CG5577-PB | 315 | CG5577-PB | 23..292 | 11..239 | 163 | 27.3 | Plus |
CG5577-PA | 315 | CG5577-PA | 23..292 | 11..239 | 163 | 27.3 | Plus |
Translation from 29 to 796
> GH05949.pep MSIKGALIDLSGTLHVEDEPTPNAVEALKRLRDSGVLVKFVTNTTKDSKA TLHERLCRIGFQLDASEIYSSLSAAVSYVENERLNPYYILSEDARQDFPP EDTRRYKDSVVIGLAPKAFNYEQLNEAFNVLLENKNHKLIAVHQGKYYKR AEGLALGPGCFVKGLEFATGRTAKVIGKPNPYFFEGALAGRDPASCVMIG DDANDDIVGAMSMGMQGILVKTGKYLPDVKPSPPPTALLENFAEAVDWII QKNQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15224-PA | 255 | GF15224-PA | 1..253 | 1..253 | 1149 | 82.2 | Plus |
Dana\GF25233-PA | 315 | GF25233-PA | 23..285 | 2..225 | 168 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10543-PA | 255 | GG10543-PA | 1..255 | 1..255 | 1322 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10842-PA | 258 | GH10842-PA | 1..258 | 1..255 | 997 | 71.7 | Plus |
Dgri\GH14576-PA | 309 | GH14576-PA | 23..271 | 2..223 | 170 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17294-PA | 255 | CG17294-PA | 1..255 | 1..255 | 1318 | 100 | Plus |
CG5577-PB | 315 | CG5577-PB | 23..292 | 2..230 | 163 | 27.3 | Plus |
CG5577-PA | 315 | CG5577-PA | 23..292 | 2..230 | 163 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17355-PA | 257 | GI17355-PA | 1..257 | 1..254 | 959 | 68.9 | Plus |
Dmoj\GI13609-PA | 310 | GI13609-PA | 30..282 | 9..225 | 187 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25939-PA | 255 | GL25939-PA | 1..255 | 1..255 | 1154 | 82.4 | Plus |
Dper\GL22743-PA | 314 | GL22743-PA | 29..280 | 6..230 | 202 | 28.7 | Plus |
Dper\GL22744-PA | 297 | GL22744-PA | 16..273 | 11..229 | 164 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14446-PA | 255 | GA14446-PA | 1..255 | 1..255 | 1154 | 82.4 | Plus |
Dpse\GA18976-PA | 314 | GA18976-PA | 29..280 | 6..230 | 202 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16922-PA | 255 | GM16922-PA | 1..255 | 1..255 | 1347 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23533-PA | 255 | GD23533-PA | 1..255 | 1..255 | 1338 | 98.4 | Plus |
Dsim\GD12369-PA | 315 | GD12369-PA | 23..292 | 2..230 | 169 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18029-PA | 259 | GJ18029-PA | 1..257 | 1..254 | 1023 | 73.9 | Plus |
Dvir\GJ13944-PA | 316 | GJ13944-PA | 23..278 | 2..230 | 201 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24162-PA | 256 | GK24162-PA | 1..253 | 1..253 | 1138 | 80.6 | Plus |
Dwil\GK10443-PA | 313 | GK10443-PA | 23..289 | 2..229 | 178 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18764-PA | 255 | GE18764-PA | 1..255 | 1..255 | 1314 | 96.1 | Plus |