BDGP Sequence Production Resources |
Search the DGRC for GH05991
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 59 |
Well: | 91 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9106-RA |
Protein status: | GH05991.pep: gold |
Preliminary Size: | 1415 |
Sequenced Size: | 1259 |
Gene | Date | Evidence |
---|---|---|
CG9106 | 2001-01-01 | Release 2 assignment |
CG9106 | 2001-09-19 | Blastp of sequenced clone |
CG9106 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9106 | 2008-04-29 | Release 5.5 accounting |
CG9106 | 2008-08-15 | Release 5.9 accounting |
CG9106 | 2008-12-18 | 5.12 accounting |
1259 bp (1259 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060241
> GH05991.complete ACACAATCGACACAAAATACACACACACCGTTTAAACAAAAGTGAAAAAA AATAGAGGAAAATCGAAAAAAAAAAGAATCAAACAGCGAAACAAAAATCA TAACTTGGTATTGTATCTAGCTAATTAGAGAGTTGCACTAGAATCGCGTG CGACTTGAACGTCGAGAAGTGTATAACAGATCCCTAAGCAGCACATCACT GCACCAGAGTCTCATTGGATCGCACCGAGCAAAGTACAAAATTCGTAGGT TCAAAGTTCAAAGTTTACGGTTTCCGAAGGACTAACCGAGAATCCAACCA CGGACCATCCCGTCCAGAAGGCCAAAGGTAGCAACCAGCAACGAAGCTTC AGTATTGAGCCACTTTGATAACTGCTTCCAATCCGATTTCTTTTCCACTT TTGATAGTTTTATATTCAGATATCCCGAACCGCTGCCCTTCCAGGATGGT CATCAATCTGAATCCGTCCACCTCTTCGAACGCCAATGCCAGCGGTAGCA GCGTGGGTGGCGGCAGCGGTGGCGGCAGCGACGGTGGCAACGGCGATGGA ATGAGCAGCGCTGGGAGCCAGAGCGGCAACATCATTGGCGGAAACGGAAG CGGAAGCGGAAACGGTAACGGTAACGGTGATGGTAACGGTAGTGGCAACA CCGCCGGAAACGTCAGTAGCGGCACCCCCAGCAACCTGATGGGCATCATC AGCCATGAGATGTTCGATGGTATCGTCTATCTGCATGTGGTATGTGCCGG TGAGTCAAGCTCCAAGTGGGTCACTCTGGAGGAGGCGATGGCCTACTGTC CCAGCGGCGTTGTTGCCTACACCAAACTGCAGCTGGCCGAGATTTATGGC ATACCGATGGACGTTCTGTTCGACTGATGGTGATGCATAAACCAGATTCT TCGTTGAAGCGATTGCAGTGTACCGCACATGGACGATGGTTTTGATGGAT TCTTGATTAGCTCCGTTTGGCTTGTACGGTTTATAAGCTGGACCATGGCA ACTGTCATTTGAACTTTGGCACTGTTGGCAAAATCTAGGAATTCAGTATT CGCCAAATACGTGGCATTGGCAATATAACGTCGATTGTTTTTTCTTGCTA CATTCCCTGCTCTAAATTTTAAGTTCCTGGCGTTAAGTGATTTTTCCGAA GGCAGCAATTACTAGAAATAGTATACGAATCTGCAAGGTTATTCCGTAAT TAATTGCAAAAAAATAAAAAAAAATAATAATAAAATAAAGGAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 620..717 | 609..509 | 165 | 64.4 | Minus |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 824..882 | 2..60 | 142 | 71.2 | Plus |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 1124..1189 | 1..61 | 129 | 73.1 | Plus |
TART-A | 13424 | TART-A 13424bp | 11098..11129 | 490..521 | 115 | 84.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15161009..15161541 | 673..1205 | 99 | == | Minus |
chrX | 15161722..15161794 | 420..492 | 100 | <- | Minus |
chrX | 15161925..15162342 | 1..419 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9106-RB | 1..432 | 446..877 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9106-RB | 1..432 | 446..877 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9106-RA | 1..432 | 446..877 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9106-RB | 1..432 | 446..877 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9106-RA | 1..432 | 446..877 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9106-RA | 1..1240 | 1..1241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9106-RA | 1..1240 | 1..1241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9106-RA | 1..1240 | 1..1241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9106-RA | 1..1240 | 1..1241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9106-RA | 1..1240 | 1..1241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15271036..15271856 | 420..1241 | 99 | <- | Minus |
X | 15271987..15272405 | 1..419 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15271036..15271856 | 420..1241 | 99 | <- | Minus |
X | 15271987..15272405 | 1..419 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15271036..15271856 | 420..1241 | 99 | <- | Minus |
X | 15271987..15272405 | 1..419 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15165069..15165889 | 420..1241 | 99 | <- | Minus |
arm_X | 15166020..15166438 | 1..419 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15279134..15279954 | 420..1241 | 99 | <- | Minus |
X | 15280085..15280503 | 1..419 | 100 | Minus |
Translation from 445 to 876
> GH05991.pep MVINLNPSTSSNANASGSSVGGGSGGGSDGGNGDGMSSAGSQSGNIIGGN GSGSGNGNGNGDGNGSGNTAGNVSSGTPSNLMGIISHEMFDGIVYLHVVC AGESSSKWVTLEEAMAYCPSGVVAYTKLQLAEIYGIPMDVLFD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21046-PA | 150 | GF21046-PA | 1..150 | 1..142 | 337 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19409-PA | 136 | GG19409-PA | 63..136 | 70..143 | 324 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24304-PA | 66 | GH24304-PA | 1..58 | 82..139 | 158 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9106-PB | 143 | CG9106-PB | 1..143 | 1..143 | 747 | 100 | Plus |
CG9106-PA | 143 | CG9106-PA | 1..143 | 1..143 | 747 | 100 | Plus |
Cpr11A-PA | 270 | CG2560-PA | 192..265 | 8..81 | 144 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21546-PA | 93 | GI21546-PA | 3..93 | 39..143 | 225 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15990-PA | 118 | GL15990-PA | 1..113 | 1..139 | 159 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21546-PA | 118 | GA21546-PA | 1..113 | 1..139 | 157 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13383-PA | 133 | GM13383-PA | 59..133 | 69..143 | 366 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15692-PA | 85 | GJ15692-PA | 20..85 | 82..143 | 208 | 56.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16195-PA | 110 | GK16195-PA | 45..107 | 80..142 | 257 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16057-PA | 143 | GE16057-PA | 76..143 | 76..143 | 308 | 79.4 | Plus |
Translation from 445 to 876
> GH05991.hyp MVINLNPSTSSNANASGSSVGGGSGGGSDGGNGDGMSSAGSQSGNIIGGN GSGSGNGNGNGDGNGSGNTAGNVSSGTPSNLMGIISHEMFDGIVYLHVVC AGESSSKWVTLEEAMAYCPSGVVAYTKLQLAEIYGIPMDVLFD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9106-PB | 143 | CG9106-PB | 1..143 | 1..143 | 747 | 100 | Plus |
CG9106-PA | 143 | CG9106-PA | 1..143 | 1..143 | 747 | 100 | Plus |
Cpr11A-PA | 270 | CG2560-PA | 192..265 | 8..81 | 144 | 45.3 | Plus |