GH06048.complete Sequence
1201 bp (1201 high quality bases) assembled on 2000-02-14
GenBank Submission: AF184225
> GH06048.complete
CTATGGTGCGACAATTGATACTCGTCCTTTCTCTGATTCTCTTCTGCGGC
AGCTCACATGCTGTTGTCAGTGAATTGGCCCGTCAGAGCGAGTCTGCCAT
CCAGGGTTTGGCAGACATAAAGATGGCGCCTCTACGTTACTTAGATGTTC
TCTTTGGTGGAAATCCCGGAGGACTTCGGGGTCTAGACGGTGGAAATTCA
GCATCTTTATCAACCTTACAAGCAGCTAAAGTAGCAAATATATTGGCAAG
AGGTGATATCGCCAGTTCCGGATATAGTAAAATTTCAGCTGGCGTTGGCA
AGGGAAGCGACCTAATCACTATTATTAAGAACACTCGATCCTACGATCCG
TACCTTATTCCACCAGGTATTCCTGGCTATAATTATCCACTTGGATGGCC
CCTTCGTTATCCATTAGGTCCTTATTGGCCTAATCGACCACCATGGCTAC
CAATTAATTCTCCACCGATACGTCCAGGTGGACTTTTCCCTGGTGGACCT
TCCCCTGGTGGACCTTCCCCTGGTGAACCTTCACCTGGTGAACCTTCACC
TGGTGGACCTTCCCCTGGTGGACCTTCCCCTGGTGGACCTTCCCCTGGTG
GGCCATCCCCTGGTGGACCTTCCCCTGGTGGACCTTCCCCTGGTGGACCT
TTCCCTGGTGGATCTCCACCTTCACCAGGCGGACCACTTGGACCATGGCA
ATTTCCATGGATACTAGGTGGTCCTCGGCCGAACCGTCCAGGAAGACCTT
TCCCTGGTGGTATCCTTCCTGGTCATTTAGACGGTTCGGTAGTTCCAAAT
AGTGTGCTAAATGTTGCTGGCGGAATCTTTGGAAACGGTGGACTGTTCGG
TACGGGAATTTTCGGACAACATGGACTTTTCGGAACTGGATTTCTTAGTG
GACCTTCGTTAGACCCCTTTGGCATTTTTACTCCAATCGGAAATTTCTTT
GGATCACTAGGAAACTTATTCGGATTTAGTTCACCTAGTCAAATTATTCC
AATCTTTGGTGGGAAATTTGGTCCTTTAGGTCGCGGATTGCAGGGGTCTA
TCACCTTGGATGTTGGCGGCACAGTGCCATCGGTAAAAGGCATATTAGGA
CAACTTTTGCATCCTTTCCTCGGATTTCTGGGATAGTATCGAGGAATCGA
GTCCTGCAATAAACAATGAACCTGGTTGCTTAAAAAAAAAAAAAAAAAAA
A
GH06048.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:41:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Peb-RA | 1449 | Peb-RA | 34..1216 | 1..1183 | 5915 | 100 | Plus |
nc_9423.b | 725 | nc_9423.b | 231..725 | 511..17 | 2460 | 99.7 | Minus |
nc_9423.a | 806 | nc_9423.a | 115..553 | 1183..745 | 2195 | 100 | Minus |
nc_9423.a | 806 | nc_9423.a | 538..806 | 511..243 | 1330 | 99.6 | Minus |
nc_9423.b | 725 | nc_9423.b | 1..246 | 990..745 | 1230 | 100 | Minus |
nc_9423.b | 725 | nc_9423.b | 231..265 | 661..627 | 145 | 94.2 | Minus |
nc_9423.a | 806 | nc_9423.a | 538..572 | 661..627 | 145 | 94.2 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:17:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 21061351..21062533 | 1181..17 | 5565 | 98.2 | Minus |
chr2R | 21145070 | chr2R | 21061870..21061998 | 617..489 | 480 | 91.5 | Minus |
chr2R | 21145070 | chr2R | 21061871..21061983 | 601..489 | 460 | 93.8 | Minus |
chr2R | 21145070 | chr2R | 21061870..21061980 | 587..477 | 420 | 91.9 | Minus |
chr2R | 21145070 | chr2R | 21061870..21061965 | 572..477 | 345 | 90.6 | Minus |
chr2R | 21145070 | chr2R | 21061870..21061950 | 557..477 | 270 | 88.9 | Minus |
chr2R | 21145070 | chr2R | 21061872..21061924 | 540..488 | 220 | 94.3 | Minus |
chr2R | 21145070 | chr2R | 21061872..21061920 | 525..477 | 200 | 93.9 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:34:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:17:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 25175451..25176617 | 1183..17 | 5835 | 100 | Minus |
2R | 25286936 | 2R | 25175972..25176100 | 617..489 | 480 | 91.5 | Minus |
2R | 25286936 | 2R | 25175973..25176085 | 601..489 | 460 | 93.8 | Minus |
2R | 25286936 | 2R | 25175972..25176082 | 587..477 | 420 | 91.9 | Minus |
2R | 25286936 | 2R | 25175972..25176067 | 572..477 | 345 | 90.6 | Minus |
2R | 25286936 | 2R | 25175972..25176052 | 557..477 | 270 | 88.9 | Minus |
2R | 25286936 | 2R | 25175963..25176026 | 551..488 | 230 | 90.6 | Minus |
2R | 25286936 | 2R | 25175963..25176022 | 536..477 | 210 | 90 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:02:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 25176650..25177816 | 1183..17 | 5835 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 02:17:30 has no hits.
GH06048.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:18:14 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 21061351..21062532 | 18..1181 | 98 | <- | Minus |
chr2R | 21062594..21062610 | 1..17 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:19:53 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Peb-RA | 1..1134 | 3..1136 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:33:36 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Peb-RA | 1..1134 | 3..1136 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:18:54 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Peb-RA | 1..1134 | 3..1136 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:08:04 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Peb-RA | 1..1134 | 3..1136 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:04:13 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Peb-RA | 1..1134 | 3..1136 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:35:47 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Peb-RA | 22..1202 | 1..1181 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:33:36 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Peb-RA | 22..1202 | 1..1181 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:18:54 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Peb-RA | 22..1202 | 1..1181 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:08:04 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Peb-RA | 22..1202 | 1..1181 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:04:13 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Peb-RA | 22..1202 | 1..1181 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:18:14 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 25176678..25176694 | 1..17 | 100 | | Minus |
2R | 25175453..25176616 | 18..1181 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:18:14 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 25176678..25176694 | 1..17 | 100 | | Minus |
2R | 25175453..25176616 | 18..1181 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:18:14 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 25176678..25176694 | 1..17 | 100 | | Minus |
2R | 25175453..25176616 | 18..1181 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:18:54 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 21062976..21064139 | 18..1181 | 100 | <- | Minus |
arm_2R | 21064201..21064217 | 1..17 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:45:40 Download gff for
GH06048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 25176670..25177833 | 18..1181 | 100 | <- | Minus |
2R | 25177895..25177911 | 1..17 | 100 | | Minus |
GH06048.pep Sequence
Translation from 2 to 1135
> GH06048.pep
MVRQLILVLSLILFCGSSHAVVSELARQSESAIQGLADIKMAPLRYLDVL
FGGNPGGLRGLDGGNSASLSTLQAAKVANILARGDIASSGYSKISAGVGK
GSDLITIIKNTRSYDPYLIPPGIPGYNYPLGWPLRYPLGPYWPNRPPWLP
INSPPIRPGGLFPGGPSPGGPSPGEPSPGEPSPGGPSPGGPSPGGPSPGG
PSPGGPSPGGPSPGGPFPGGSPPSPGGPLGPWQFPWILGGPRPNRPGRPF
PGGILPGHLDGSVVPNSVLNVAGGIFGNGGLFGTGIFGQHGLFGTGFLSG
PSLDPFGIFTPIGNFFGSLGNLFGFSSPSQIIPIFGGKFGPLGRGLQGSI
TLDVGGTVPSVKGILGQLLHPFLGFLG*
GH06048.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:33:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF11506-PA | 345 | GF11506-PA | 1..144 | 1..134 | 357 | 61.9 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:33:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19857-PA | 447 | GG19857-PA | 317..447 | 234..377 | 384 | 72.9 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ebp-PB | 377 | CG2668-PB | 1..377 | 1..377 | 2062 | 100 | Plus |
Ebp-PA | 377 | CG2668-PA | 1..377 | 1..377 | 2062 | 100 | Plus |
frm-PD | 268 | CG10625-PD | 115..258 | 119..266 | 221 | 42.7 | Plus |
frm-PA | 268 | CG10625-PA | 115..258 | 119..266 | 221 | 42.7 | Plus |
frm-PE | 652 | CG10625-PE | 499..642 | 119..266 | 221 | 42.7 | Plus |
frm-PB | 682 | CG10625-PB | 529..672 | 119..266 | 221 | 42.7 | Plus |
frm-PC | 682 | CG10625-PC | 529..672 | 119..266 | 221 | 42.7 | Plus |
frm-PJ | 752 | CG10625-PJ | 115..258 | 119..266 | 221 | 42.7 | Plus |
frm-PI | 766 | CG10625-PI | 115..258 | 119..266 | 221 | 42.7 | Plus |
frm-PH | 1180 | CG10625-PH | 529..672 | 119..266 | 221 | 42.7 | Plus |
frm-PE | 652 | CG10625-PE | 457..588 | 128..251 | 195 | 40.7 | Plus |
frm-PD | 268 | CG10625-PD | 84..204 | 139..251 | 194 | 42.6 | Plus |
frm-PA | 268 | CG10625-PA | 84..204 | 139..251 | 194 | 42.6 | Plus |
frm-PB | 682 | CG10625-PB | 498..618 | 139..251 | 194 | 42.6 | Plus |
frm-PC | 682 | CG10625-PC | 498..618 | 139..251 | 194 | 42.6 | Plus |
frm-PJ | 752 | CG10625-PJ | 84..204 | 139..251 | 194 | 42.6 | Plus |
frm-PI | 766 | CG10625-PI | 84..204 | 139..251 | 194 | 42.6 | Plus |
frm-PH | 1180 | CG10625-PH | 498..618 | 139..251 | 194 | 42.6 | Plus |
lcs-PA | 145 | CG12794-PA | 21..102 | 158..245 | 189 | 55.4 | Plus |
frm-PJ | 752 | CG10625-PJ | 144..263 | 120..229 | 186 | 43.5 | Plus |
frm-PI | 766 | CG10625-PI | 144..263 | 120..229 | 186 | 43.5 | Plus |
frm-PH | 1180 | CG10625-PH | 558..677 | 120..229 | 186 | 43.5 | Plus |
Mur82C-PB | 578 | CG12586-PB | 400..476 | 157..231 | 180 | 58.1 | Plus |
frm-PJ | 752 | CG10625-PJ | 164..267 | 120..223 | 173 | 43.2 | Plus |
frm-PI | 766 | CG10625-PI | 164..267 | 120..223 | 173 | 43.2 | Plus |
frm-PH | 1180 | CG10625-PH | 578..681 | 120..223 | 173 | 43.2 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 478..602 | 159..279 | 173 | 44.2 | Plus |
frm-PD | 268 | CG10625-PD | 164..265 | 120..227 | 172 | 42.2 | Plus |
frm-PA | 268 | CG10625-PA | 164..265 | 120..227 | 172 | 42.2 | Plus |
frm-PE | 652 | CG10625-PE | 548..649 | 120..227 | 172 | 42.2 | Plus |
frm-PB | 682 | CG10625-PB | 578..679 | 120..227 | 172 | 42.2 | Plus |
frm-PC | 682 | CG10625-PC | 578..679 | 120..227 | 172 | 42.2 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 460..591 | 153..279 | 169 | 42.2 | Plus |
frm-PE | 652 | CG10625-PE | 457..570 | 142..253 | 168 | 44.1 | Plus |
ena-PG | 664 | CG15112-PG | 339..514 | 119..283 | 166 | 31.2 | Plus |
ena-PE | 684 | CG15112-PE | 359..534 | 119..283 | 166 | 31.2 | Plus |
ena-PC | 684 | CG15112-PC | 359..534 | 119..283 | 166 | 31.2 | Plus |
ena-PA | 684 | CG15112-PA | 359..534 | 119..283 | 166 | 31.2 | Plus |
ena-PD | 687 | CG15112-PD | 362..537 | 119..283 | 166 | 31.2 | Plus |
ena-PB | 834 | CG15112-PB | 508..683 | 119..283 | 166 | 31.2 | Plus |
ena-PF | 980 | CG15112-PF | 655..830 | 119..283 | 166 | 31.2 | Plus |
lcs-PA | 145 | CG12794-PA | 26..99 | 155..222 | 163 | 57.9 | Plus |
Sec24CD-PA | 1193 | CG10882-PA | 261..394 | 119..252 | 163 | 39.2 | Plus |
Sec24CD-PB | 1193 | CG10882-PB | 261..394 | 119..252 | 163 | 39.2 | Plus |
Sec24CD-PC | 1231 | CG10882-PC | 261..394 | 119..252 | 163 | 39.2 | Plus |
lcs-PA | 145 | CG12794-PA | 20..97 | 165..253 | 162 | 47.3 | Plus |
scramb1-PA | 416 | CG32056-PA | 32..172 | 120..257 | 162 | 37.2 | Plus |
Mur82C-PB | 578 | CG12586-PB | 399..473 | 179..249 | 159 | 54.9 | Plus |
CG11581-PB | 334 | CG11581-PB | 61..287 | 119..341 | 159 | 33.6 | Plus |
CG11581-PA | 334 | CG11581-PA | 61..287 | 119..341 | 159 | 33.6 | Plus |
CG15021-PA | 420 | CG15021-PA | 189..325 | 116..252 | 159 | 34.2 | Plus |
CG11581-PB | 334 | CG11581-PB | 55..226 | 150..306 | 157 | 32.8 | Plus |
CG11581-PA | 334 | CG11581-PA | 55..226 | 150..306 | 157 | 32.8 | Plus |
CG15021-PA | 420 | CG15021-PA | 103..287 | 120..265 | 157 | 32.8 | Plus |
dia-PE | 1091 | CG1768-PE | 503..603 | 143..245 | 157 | 41.5 | Plus |
dia-PB | 1091 | CG1768-PB | 503..603 | 143..245 | 157 | 41.5 | Plus |
dia-PA | 1091 | CG1768-PA | 503..603 | 143..245 | 157 | 41.5 | Plus |
dia-PD | 1098 | CG1768-PD | 510..610 | 143..245 | 157 | 41.5 | Plus |
CG7924-PA | 321 | CG7924-PA | 83..204 | 108..225 | 154 | 37.5 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:33:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL16826-PA | 369 | GL16826-PA | 16..114 | 16..129 | 232 | 54.4 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:33:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA15417-PA | 369 | GA15417-PA | 16..114 | 16..129 | 238 | 55.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:33:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM11761-PA | 203 | GM11761-PA | 1..99 | 41..129 | 342 | 76.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:33:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD24894-PA | 246 | GD24894-PA | 1..110 | 1..101 | 454 | 87.3 | Plus |
GH06048.hyp Sequence
Translation from 2 to 1135
> GH06048.hyp
MVRQLILVLSLILFCGSSHAVVSELARQSESAIQGLADIKMAPLRYLDVL
FGGNPGGLRGLDGGNSASLSTLQAAKVANILARGDIASSGYSKISAGVGK
GSDLITIIKNTRSYDPYLIPPGIPGYNYPLGWPLRYPLGPYWPNRPPWLP
INSPPIRPGGLFPGGPSPGGPSPGEPSPGEPSPGGPSPGGPSPGGPSPGG
PSPGGPSPGGPSPGGPFPGGSPPSPGGPLGPWQFPWILGGPRPNRPGRPF
PGGILPGHLDGSVVPNSVLNVAGGIFGNGGLFGTGIFGQHGLFGTGFLSG
PSLDPFGIFTPIGNFFGSLGNLFGFSSPSQIIPIFGGKFGPLGRGLQGSI
TLDVGGTVPSVKGILGQLLHPFLGFLG*
GH06048.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:18:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Peb-PB | 377 | CG2668-PB | 1..377 | 1..377 | 2062 | 100 | Plus |
Peb-PA | 377 | CG2668-PA | 1..377 | 1..377 | 2062 | 100 | Plus |
CG10625-PD | 268 | CG10625-PD | 115..258 | 119..266 | 221 | 42.7 | Plus |
CG10625-PA | 268 | CG10625-PA | 115..258 | 119..266 | 221 | 42.7 | Plus |
CG10625-PE | 652 | CG10625-PE | 499..642 | 119..266 | 221 | 42.7 | Plus |
CG10625-PD | 268 | CG10625-PD | 84..204 | 139..251 | 194 | 42.6 | Plus |
CG10625-PA | 268 | CG10625-PA | 84..204 | 139..251 | 194 | 42.6 | Plus |
CG10625-PD | 268 | CG10625-PD | 164..265 | 120..227 | 172 | 42.2 | Plus |
CG10625-PA | 268 | CG10625-PA | 164..265 | 120..227 | 172 | 42.2 | Plus |