BDGP Sequence Production Resources |
Search the DGRC for GH06180
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 61 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | eIF-2alpha-RA |
Protein status: | GH06180.pep: gold |
Preliminary Size: | 1257 |
Sequenced Size: | 1217 |
Gene | Date | Evidence |
---|---|---|
CG9946 | 2000-02-14 | Blastp of sequenced clone |
CG9946 | 2001-01-01 | Release 2 assignment |
CG9946 | 2003-01-01 | Sim4 clustering to Release 3 |
eIF-2alpha | 2008-04-29 | Release 5.5 accounting |
eIF-2alpha | 2008-08-15 | Release 5.9 accounting |
eIF-2alpha | 2008-12-18 | 5.12 accounting |
1217 bp (1217 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145633
> GH06180.complete CTTCTTCTTGCGCCCGCTCGGCAGAAATTGTACACGTTTTTCATTTCGAA AAGTCCAAATTGCCCATTTTTTGGCCATAGACCACAGACTTTAACATGGC CCTGACGTCGCGCTTCTACAACGAGCGGTATCCGGAGATCGAGGATGTCG TTATGGTGAACGTGCTGTCCATCGCCGAGATGGGCGCCTACGTTCATCTG CTTGAGTACAACAACATCGAGGGCATGATCCTGCTGTCGGAGCTGTCCCG CCGGCGCATCCGCTCCATCAACAAGCTGATTCGTGTCGGCAAGACCGAAC CGGTGGTGGTTATCCGTGTTGACAAGGAGAAGGGCTACATCGATCTGTCG AAGCGTCGCGTTTCGCCCGAAGATGTCGAGAAGTGCACCGAGCGCTTCGC TAAGGCCAAGGCCATCAACTCACTGCTCCGCCATGTCGCCGACATACTCG GCTTCGAGGGCAACGAGAAGCTGGAAGATCTCTACCAGAAGACCGCCTGG CACTTCGAGAAGAAGTACAACAACAAGACGGTCGCCTACGACATCTTCAA GCAATCGGTCACCGATCCCACCGTCTTCGATGAGTGCAACCTGGAACCGG AGACCAAGGAGGTCCTGTTGAGCAACATCAAGCGGAAGCTGGTCTCGCCC ACTGTCAAGATCCGTGCGGACATCGAGTGCTCCTGCTACGGTTACGAGGG CATCGACGCTGTCAAGGCATCGCTCACCAAGGGCCTGGAGCTGAGCACCG AGGAGCTGCCCATTCGCATCAACCTGATAGCACCGCCACTCTATGTAATG ACCACATCCACTACCAAGAAGACAGACGGTTTAAAGGCTCTGGAGGTGGC CATTGAGCACATTCGCGCCAAGACCAGCGAGTACGATGGAGAGTTCAAGG TGATCATGGCACCCAAACTGGTTACGGCCATCGACGAGGCGGATCTGGCC AGACGCCTGGAGCGCGCTGAGGCCGAGAACGCCCAGGTGGCTGGCGACGA TGACGAGGAGGATGGCGCCGACCAGGAGGGCATGCAGTTCGATCCAGAGA AGGAGTTCAACCACAAGGGATCGGGGGCGGGTCGTGCGAACGAGGAGGAT GAGGAGGAGGAAGAGGATTAGCGTAGCCACAGCATCAGACACAACTATAG CAACTGTAACAAACAATTAAAGGAGTTTTGCAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF-2alpha-RA | 1603 | eIF-2alpha-RA | 244..1429 | 1..1186 | 5930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16335210..16335600 | 791..1181 | 93 | <- | Minus |
chrX | 16335900..16336689 | 1..790 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2alpha-RA | 1..1026 | 96..1121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2alpha-RA | 1..1026 | 96..1121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2alpha-RA | 1..1026 | 96..1121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2alpha-RA | 1..1026 | 96..1121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2alpha-RA | 1..1026 | 96..1121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2alpha-RA | 1..1181 | 1..1181 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2alpha-RA | 1..1181 | 1..1181 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2alpha-RA | 20..1200 | 1..1181 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2alpha-RA | 1..1181 | 1..1181 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-2alpha-RA | 20..1200 | 1..1181 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16446185..16446974 | 1..790 | 100 | Minus | |
X | 16445495..16445885 | 791..1181 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16446185..16446974 | 1..790 | 100 | Minus | |
X | 16445495..16445885 | 791..1181 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16446185..16446974 | 1..790 | 100 | Minus | |
X | 16445495..16445885 | 791..1181 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16339528..16339918 | 791..1181 | 100 | <- | Minus |
arm_X | 16340218..16341007 | 1..790 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16453593..16453983 | 791..1181 | 100 | <- | Minus |
X | 16454283..16455072 | 1..790 | 100 | Minus |
Translation from 95 to 1120
> GH06180.pep MALTSRFYNERYPEIEDVVMVNVLSIAEMGAYVHLLEYNNIEGMILLSEL SRRRIRSINKLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSPEDVEKCTER FAKAKAINSLLRHVADILGFEGNEKLEDLYQKTAWHFEKKYNNKTVAYDI FKQSVTDPTVFDECNLEPETKEVLLSNIKRKLVSPTVKIRADIECSCYGY EGIDAVKASLTKGLELSTEELPIRINLIAPPLYVMTTSTTKKTDGLKALE VAIEHIRAKTSEYDGEFKVIMAPKLVTAIDEADLARRLERAEAENAQVAG DDDEEDGADQEGMQFDPEKEFNHKGSGAGRANEEDEEEEED*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19374-PA | 347 | GF19374-PA | 1..338 | 1..332 | 1569 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19321-PA | 341 | GG19321-PA | 1..341 | 1..341 | 1745 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF2alpha-PB | 341 | CG9946-PB | 1..341 | 1..341 | 1731 | 100 | Plus |
eIF2alpha-PA | 341 | CG9946-PA | 1..341 | 1..341 | 1731 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21763-PA | 342 | GI21763-PA | 1..328 | 1..328 | 1580 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20268-PA | 344 | GL20268-PA | 1..328 | 1..328 | 1604 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22144-PA | 344 | GA22144-PA | 1..328 | 1..328 | 1604 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13399-PA | 341 | GM13399-PA | 1..341 | 1..341 | 1783 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15749-PA | 341 | GD15749-PA | 1..341 | 1..341 | 1789 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19141-PA | 342 | GJ19141-PA | 1..331 | 1..332 | 1577 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25248-PA | 345 | GK25248-PA | 1..332 | 1..332 | 1532 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15968-PA | 342 | GE15968-PA | 1..341 | 1..341 | 1740 | 96.8 | Plus |
Translation from 95 to 1120
> GH06180.hyp MALTSRFYNERYPEIEDVVMVNVLSIAEMGAYVHLLEYNNIEGMILLSEL SRRRIRSINKLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSPEDVEKCTER FAKAKAINSLLRHVADILGFEGNEKLEDLYQKTAWHFEKKYNNKTVAYDI FKQSVTDPTVFDECNLEPETKEVLLSNIKRKLVSPTVKIRADIECSCYGY EGIDAVKASLTKGLELSTEELPIRINLIAPPLYVMTTSTTKKTDGLKALE VAIEHIRAKTSEYDGEFKVIMAPKLVTAIDEADLARRLERAEAENAQVAG DDDEEDGADQEGMQFDPEKEFNHKGSGAGRANEEDEEEEED*