BDGP Sequence Production Resources |
Search the DGRC for GH06306
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 63 |
Well: | 6 |
Vector: | pOT2 |
Associated Gene/Transcript | ref(2)P-RA |
Protein status: | GH06306.pep: gold |
Preliminary Size: | 4056 |
Sequenced Size: | 3627 |
Gene | Date | Evidence |
---|---|---|
CG10360 | 2002-01-03 | Blastp of sequenced clone |
ref(2)P | 2008-04-29 | Release 5.5 accounting |
ref(2)P | 2008-08-15 | Release 5.9 accounting |
ref(2)P | 2008-12-18 | 5.12 accounting |
3627 bp (3627 high quality bases) assembled on 2002-01-03
GenBank Submission: AY089494
> GH06306.complete GAAGGTTCGAAAAAGGCTTCACGAGATTGTCAGTAGGAGGACATTTTATA TTCGGTTATCTACACCGCGCCGATGAGCACAACGACCGCCGGGATGGGCA TCCCCCGGACGTGCCACGCTGCCCCGGTCTGCACCAGCCCGTGAGACCCG GGGTGCGTCCATGTGGGCGGATTCTCGAGCGGCGGAGCTGTGCGGCGCAA GCAACTATAGAAACGCACGATATATATAAATATAGCATATTTGAGTGTTA AAGGATATACAAGAATATTTACAGCCATGCCATAGCTTACAACCTAAATT ATATTATTATATACATGTCTAGGTGTTAAGCATTGAATTCAATTATGAGG CATTTTACTTACTCGTACATTACTCGATATCGATGTTGGCATTAAACTTT AACTCTAATCGATGTGCTTGAAAAACCAGCAAATGAACGACAACAATCGC TGAACGGTATACATATGCCAAGCCAGACAGAACTAGAACACGAAATACAC TGAGAAAAACGAAAGTAGACTTCACAGGCCCACACTGAACCACTCACATA CCCAGATACATATACAAGACACACATATACATACAAGAATACAAGAAAAG ATTGCAAAATTTGTACCTAACAAAGTTCTATTTACAACATGAAACGAGAG AGTTTGGTGAGGAGCAACCTATTGATGTGTATGACAATTAATTATACAAG GATATAATCACACTTAACAAATATATTTGTATACAAAACATATATTATTC ATATACAATATGGTGAATGTCATTATCTATCTAACCAGCATGGGCTCGAT ATTCGAAGCGAATCGGGCCGTGTTTTACCAGACCATATGTATGTGTGCGA GAAGTCAAGAAATTGTTCAGTTATCAATCGTAACAAACGTACACTTTTTA CCCTTCGCAGTTGATTATATCATAACTACTATATATATTATTATATACGT ATATTATCGAAGTAAGTACATTTATGTCAGAGGAACGGCACCGAAGCTCC AGCATCTGCCGGCCAGTTCGGTCCTTGGCCATCGATTCATGAGGTGGTCG GGTGGGCGGAGGGGATTACTGGGGGAGGTTGGAGCTTCGCGTGCCGTTAA AAGTATGTGCCACAAACAAACTGCAGAATATCACCGGAAAACAAAAATCA GAAAATCCAAAAAAAAAAAAAAACTACTAAGGCCAGGCAATACAACAGAA TTGCAGCCTTGGGAAGCTGGAAAGAACATCTCCAGTTCAATATCTATATC CCTACATCCAGTGACGACCCAGAACGAACAAGGACAAACAGGAAACGAAC TATGGAATATATCGAGATAATCACAGGAATCACACATTCTATACTGCACA CTCCACACGAAAGATACAAAGATACAGCGACCAGCGATTCAAGGCACCCG ACGAGAAAAAAAAAAAAAAAAAAAAACCCAGCAACTAGTTCGCCTAGTAT ATATACCTGCTCTCACCCAGCTGCACTTGTATACACAATCGAACGGCCGA ACAAAAACTACGCAGTAGTCGAGAGCTCCAAATTAATAGAATCCGTCACA TAAATTCGCCGCAACAAGTTAAACGAGAATAAAAGCGTCAGCATCGATAT ATATACATACATATATTCAAAAGTCTGTCGAAACTACAGAATACGTTGCG AAAATGCCGGAGAAGCTGTTGAAAATCACCTACCAGGGCGCTGGACCCCA GAAAAAGATAAATGCATACCTGCGGATGCCCTCCCAGAATTACACCATAT TGCGTCGCGAAATCGAGCTGTATCTTTTCCAGGAGCGCCAGTTACCCAAA TGCGACGTAAGGACCTTCTGGATCGACGCTGATAAAGATGAAATCGAAAT AGTCAACCAAAATGACTATGAGATTTTCCTGGCCAAGTGCGAGAGCAATA TGCACGTTCAGGTGGCTCCACTGGCGCCCGTAGAGGAGCCAAAGGCCACC AAGCAAGAGGGTTCTTCGGCCAACGCTGAAGCTCCTTCTGTCGACGATCC GAGCAATTTCACCATCCACGACGCCGTTGAATGCGATGGCTGCGGCTTGG CTCCCTTGATTGGGTTCCGCTACAAGTGCGTTCAGTGCAGCAACTATGAT CTTTGCCAGAAATGCGAGTTGGCTCACAAGCATCCTGAGCACTTGATGCT ACGCATGCCGACCAACAATGGACCCGGTATGGTCGATGCCTGGTTCACAG GTCCAGGATTGGGACGCCGCAGTGGCCGGCGCTCCAGGGGACATTGCCCG TTTCAGGAGACGAACCAGGCAGATCCTGCTGGCGAACCCGCAAGGGATAG TCGCCGTGAACGGCGTCAGGCCCGCCGCCATGCCGGAGTCTTGACTCAGT TTGTCGAGATGATGACCAACTTGCCGCTGAACACAACAACGGCCACGGCA CCAGCCGAACCGCAGAAACCGAAGGCTGCAGAACAAACTGAAAGTCCTCC ACAAGCTGAGCCCACTGTTACCGCTGAAAAGGCAGCTGAATCCGAGGCCA AACCAACTGAGCCGAAGAAGGTTAACACTGATCAAAGTGTCCCTAGAACC GAAGATCCAGTGACGACTCCACGTTCCACTCAGCCAACTACTCCAGTGAT TAATCTGGATAACATTTCGCAGATTGTGCCACCCGAGTACATGAGTGCTG GCATCGAAATCCTTAATAACTTCAGCGAAATGTTTTCCAAGATTATCGAT ACCACTGAGGGCGGTGATTCGGGAATTTTTGCGCCCTCAACGACTCCCAG TGCTGAGAATAAGAAACCAGAAGAGCAGGGTCAATCCAGTGGCCAGTCGG GGGCATCCTCGGCCAACCAGTCAGCTGTTCCCTCTGCCGCTCCATCGGCT AATCAGTCTAATGTCCCATCTGCTAACCAGTCGGCCACTCCATCAATTTC TGGTTCGATCCCTGATGCTCAGCTTGAGACAGAGCCCCTGAATCCTAAGC CATCGGAAACCACCACCGAAACAGAGCAGGAAAGACGCCGTTCAGACAGC TTGGATCCAGAGTGGCAGCTTATTGACAATGCATACTCTGCAAACAATAG TAACTTGATCAATCTGGACACAACCAATCCCACTGCTGCTCCTCAGGAGC CGGTGCGTGATTTTGGTCAGCTGGGCGAACTATTGCGTCAGCACATGAAT GAGGAGGCTCGCGTGGAGCAGGCTTCGGCCAACACCCAGACTGCTCAAGT TGATACGGTGAGTACATCGACCTCGACCACATCGGTGACCACCAATAGCG TCGGCACCTCCCCAGCAGCTCCCGACGACAAGCGCACGGTCCCCGTCTAC CACACTGATGAAAGCATCAATAAATCGATCCATGCCATGATGGCCATGGG TTTCAGCAACGAGGGCGCCTGGCTAACCCAGCTCCTAGAGTCGGTTCAGG GCAATATCTCAGCTGCCTTGGACGTAATGAACGTATCGCAGAACCGCAAC TAAATATTCATATTCAATATCGATATATCTACAATGTATCTTCAATATCT ATAGAACCCAATGAAAAAGGGATTTTACTTTATCGTATCAGTTTACTACG TAGCTTAGTTTTTCTGTGGTGCTAGATTTATCTCGTAGCCAAAATAAATG TGAAAATAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ref(2)P.a | 2481 | ref(2)P.a | 210..2392 | 1428..3610 | 10915 | 100 | Plus |
ref(2)P-RA | 2485 | ref(2)P-RA | 210..2392 | 1428..3610 | 10915 | 100 | Plus |
ref(2)P-RB | 2223 | ref(2)P-RB | 1..2134 | 1477..3610 | 10670 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 19542161..19543643 | 1825..3307 | 7415 | 100 | Plus |
chr2L | 23010047 | chr2L | 1012303..1013715 | 1411..1 | 6910 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 19541133..19541530 | 1428..1825 | 1990 | 100 | Plus |
chr2L | 23010047 | chr2L | 19543698..19544000 | 3307..3609 | 1515 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19543619..19545101 | 1825..3307 | 7415 | 100 | Plus |
2L | 23513712 | 2L | 1012404..1013814 | 1411..1 | 7055 | 100 | Minus |
2L | 23513712 | 2L | 19542591..19542988 | 1428..1825 | 1990 | 100 | Plus |
2L | 23513712 | 2L | 19545156..19545459 | 3307..3610 | 1520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19543619..19545101 | 1825..3307 | 7415 | 100 | Plus |
2L | 23513712 | 2L | 1012404..1013814 | 1411..1 | 7055 | 100 | Minus |
2L | 23513712 | 2L | 19542591..19542988 | 1428..1825 | 1990 | 100 | Plus |
2L | 23513712 | 2L | 19545156..19545459 | 3307..3610 | 1520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 5501..5843 | 424..760 | 198 | 54.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 19541124..19541530 | 1421..1825 | 99 | -> | Plus |
chr2L | 19542162..19543643 | 1826..3307 | 100 | -> | Plus |
chr2L | 19543699..19544000 | 3308..3609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ref(2)P-RB | 1..1800 | 1654..3453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ref(2)P-RB | 1..1800 | 1654..3453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ref(2)P-RA | 1..1800 | 1654..3453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ref(2)P-RB | 1..1800 | 1654..3453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ref(2)P-RA | 1..1800 | 1654..3453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ref(2)P-RA | 137..2327 | 1421..3609 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ref(2)P-RA | 137..2327 | 1421..3609 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ref(2)P-RA | 115..2305 | 1421..3609 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ref(2)P-RA | 137..2327 | 1421..3609 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ref(2)P-RA | 115..2305 | 1421..3609 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19542588..19542988 | 1427..1825 | 99 | -> | Plus |
2L | 19543620..19545101 | 1826..3307 | 100 | -> | Plus |
2L | 19545157..19545458 | 3308..3609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19542588..19542988 | 1427..1825 | 99 | -> | Plus |
2L | 19543620..19545101 | 1826..3307 | 100 | -> | Plus |
2L | 19545157..19545458 | 3308..3609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19542588..19542988 | 1427..1825 | 99 | -> | Plus |
2L | 19543620..19545101 | 1826..3307 | 100 | -> | Plus |
2L | 19545157..19545458 | 3308..3609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 19542588..19542988 | 1427..1825 | 99 | -> | Plus |
arm_2L | 19543620..19545101 | 1826..3307 | 100 | -> | Plus |
arm_2L | 19545157..19545458 | 3308..3609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19542588..19542988 | 1427..1825 | 99 | -> | Plus |
2L | 19543620..19545101 | 1826..3307 | 100 | -> | Plus |
2L | 19545157..19545458 | 3308..3609 | 100 | Plus |
Translation from 1653 to 3452
> GH06306.pep MPEKLLKITYQGAGPQKKINAYLRMPSQNYTILRREIELYLFQERQLPKC DVRTFWIDADKDEIEIVNQNDYEIFLAKCESNMHVQVAPLAPVEEPKATK QEGSSANAEAPSVDDPSNFTIHDAVECDGCGLAPLIGFRYKCVQCSNYDL CQKCELAHKHPEHLMLRMPTNNGPGMVDAWFTGPGLGRRSGRRSRGHCPF QETNQADPAGEPARDSRRERRQARRHAGVLTQFVEMMTNLPLNTTTATAP AEPQKPKAAEQTESPPQAEPTVTAEKAAESEAKPTEPKKVNTDQSVPRTE DPVTTPRSTQPTTPVINLDNISQIVPPEYMSAGIEILNNFSEMFSKIIDT TEGGDSGIFAPSTTPSAENKKPEEQGQSSGQSGASSANQSAVPSAAPSAN QSNVPSANQSATPSISGSIPDAQLETEPLNPKPSETTTETEQERRRSDSL DPEWQLIDNAYSANNSNLINLDTTNPTAAPQEPVRDFGQLGELLRQHMNE EARVEQASANTQTAQVDTVSTSTSTTSVTTNSVGTSPAAPDDKRTVPVYH TDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVMNVSQNRN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14248-PA | 598 | GF14248-PA | 1..598 | 1..599 | 1802 | 60.6 | Plus |
Dana\GF22430-PA | 440 | GF22430-PA | 141..440 | 246..599 | 651 | 48.8 | Plus |
Dana\GF22430-PA | 440 | GF22430-PA | 1..102 | 25..141 | 367 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\ref(2)P-PA | 594 | GG21195-PA | 1..594 | 1..599 | 2433 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13424-PA | 681 | GH13424-PA | 1..677 | 1..596 | 1048 | 41 | Plus |
Dgri\GH12515-PA | 461 | GH12515-PA | 17..215 | 196..357 | 206 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ref(2)P-PB | 599 | CG10360-PB | 1..599 | 1..599 | 3119 | 100 | Plus |
ref(2)P-PA | 599 | CG10360-PA | 1..599 | 1..599 | 3119 | 100 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 521..904 | 211..582 | 164 | 21.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17660-PA | 628 | GI17660-PA | 1..624 | 1..596 | 1289 | 49.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26088-PA | 587 | GL26088-PA | 1..587 | 1..599 | 1662 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10271-PA | 587 | GA10271-PA | 1..587 | 1..599 | 1661 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17364-PA | 599 | GM17364-PA | 1..599 | 1..599 | 2649 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\ref(2)P-PA | 599 | GD24222-PA | 1..599 | 1..599 | 2670 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18227-PA | 653 | GJ18227-PA | 1..650 | 1..597 | 1357 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24659-PA | 350 | GK24659-PA | 1..140 | 1..152 | 486 | 60.5 | Plus |
Dwil\GK24381-PA | 623 | GK24381-PA | 468..619 | 450..596 | 417 | 67.1 | Plus |
Dwil\GK24659-PA | 350 | GK24659-PA | 231..330 | 59..172 | 360 | 56.1 | Plus |
Dwil\GK24659-PA | 350 | GK24659-PA | 143..228 | 59..152 | 275 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\ref(2)P-PA | 605 | GE13269-PA | 1..605 | 1..599 | 2580 | 86.8 | Plus |
Translation from 1653 to 3452
> GH06306.hyp MPEKLLKITYQGAGPQKKINAYLRMPSQNYTILRREIELYLFQERQLPKC DVRTFWIDADKDEIEIVNQNDYEIFLAKCESNMHVQVAPLAPVEEPKATK QEGSSANAEAPSVDDPSNFTIHDAVECDGCGLAPLIGFRYKCVQCSNYDL CQKCELAHKHPEHLMLRMPTNNGPGMVDAWFTGPGLGRRSGRRSRGHCPF QETNQADPAGEPARDSRRERRQARRHAGVLTQFVEMMTNLPLNTTTATAP AEPQKPKAAEQTESPPQAEPTVTAEKAAESEAKPTEPKKVNTDQSVPRTE DPVTTPRSTQPTTPVINLDNISQIVPPEYMSAGIEILNNFSEMFSKIIDT TEGGDSGIFAPSTTPSAENKKPEEQGQSSGQSGASSANQSAVPSAAPSAN QSNVPSANQSATPSISGSIPDAQLETEPLNPKPSETTTETEQERRRSDSL DPEWQLIDNAYSANNSNLINLDTTNPTAAPQEPVRDFGQLGELLRQHMNE EARVEQASANTQTAQVDTVSTSTSTTSVTTNSVGTSPAAPDDKRTVPVYH TDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVMNVSQNRN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ref(2)P-PB | 599 | CG10360-PB | 1..599 | 1..599 | 3119 | 100 | Plus |
ref(2)P-PA | 599 | CG10360-PA | 1..599 | 1..599 | 3119 | 100 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 521..904 | 211..582 | 164 | 21.7 | Plus |