Clone GH06385 Report

Search the DGRC for GH06385

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:63
Well:85
Vector:pOT2
Associated Gene/TranscriptCG43173-RA
Protein status:GH06385.pep: wuzgold
Preliminary Size:1315
Sequenced Size:1190

Clone Sequence Records

GH06385.complete Sequence

1190 bp (1190 high quality bases) assembled on 2002-05-15

GenBank Submission: AY119479

> GH06385.complete
AAACACTCAAACGGAGCAGCTTACAAAAACAGACAACGAAACTGTGAAGT
AAACATTTTCGTCGGGTTCTGGTCATGTGCTCGCTGTGTGGTTCCCGATT
CCAGGGAATATTACGAACTTAACACTTGGTCAGTCCATTGGCCCATGTGC
AGCGTGGGAAATTTGGAAGCAGTTCGTAGTCCGGAATGAAATTAAATGTG
GGTCAAATTCAGTTTCATTAGAACTCGCCAGTGTCGCTAGGCGATTGAGT
TAGATAAGGAGTGAAGTAAAGGCGGGGTATCCAAATGAATATGACTTCCT
TATCCAAGACAGATGGAATTCCACTGAAAGTGAAGCAGGCATCTGTTACC
TCCTTTGTGGTCTCAATTGGCTTGTTATACGATATGCCCAGACCATGCCC
TTTTCACCCTGCTTTTGAGATTTTCTCCGGCAAACGTTCACTGACCTCTT
TCAGAGACCGGAGATCCGAAGAAAGTTTTTAGCCCGAAAATGCGTCACTG
CCCAAACAGAAAACAAGCGGCAACAGAAGCAGCATGAGTGCCAAGAAACT
GTGAAGAGTGTTTCATAGAAAAATTATACATCATGATCGGCGGCCGATAA
AGATCTTCATTAGTCTGGAAACACGGAGTTGGGCCCCAACTCCGAATGGA
GACTGGTGACTGGGTGACCCCAATAGGCATTCAAATCTCTCGATTTGCCT
ACTCGGTCCAACTCTCACTTTTTGCCGATCGCTGCTGTCGGTGAAAATCA
TTCAAATTCGGAATATATGTATGTATGTATGTCCAATATATATGTCCAAG
AGTCGGGGCCAGTTCAACAAACCCCATTGAACTCAATCCGGAGCAATGAC
ACCTCGCCGGGCCCTACAATCCGCACTCAACCTCACTTTCTTTTACGTGC
ATATGTCCATCCCTGTCATCCAAACATCTCTCTCTCCCTCTTGCACCCTT
TGGCCGTTGAGGGGCTTACGGTTGTCTTATAGAGCTGTTGCCGTTGTTGC
AACATTTTTCACTTTCTTTTCGGGGATCGCCATTTGAATGCCTTTCTTTG
GCAGGGTAATGCAAAGCCAACAAAGACGACAACCAACTATTTTGTCCCAA
CTATTTTGATTTCTAAATTATTACTTGCTTTTTAACTTTTAATCAGTATT
AAAACTTTGGAAAATTCAAAAAAAAAAAAAAAAAAAAAAA

GH06385.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:08:27
Subject Length Description Subject Range Query Range Score Percent Strand
nc_13291.a 1167 nc_13291.a 1..1167 1..1167 5835 100 Plus
nc_13291.b 1060 nc_13291.b 1..314 25..338 1570 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:45:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 17924373..17925204 336..1167 4130 99.8 Plus
chr3L 24539361 chr3L 17923640..17923978 1..339 1665 99.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:34:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:45:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17934741..17935574 336..1169 4170 100 Plus
3L 28110227 3L 17934008..17934346 1..339 1695 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 17927841..17928674 336..1169 4170 100 Plus
3L 28103327 3L 17927108..17927446 1..339 1695 100 Plus
Blast to na_te.dros performed 2019-03-15 15:45:50
Subject Length Description Subject Range Query Range Score Percent Strand
transib4 2656 transib4 TRANSIB4 2656bp 2477..2636 1002..1157 122 58.9 Plus

GH06385.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:46:46 Download gff for GH06385.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 17923640..17923977 1..338 99 -> Plus
chr3L 17924376..17925204 339..1167 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:39:21 Download gff for GH06385.complete
Subject Subject Range Query Range Percent Splice Strand
CG43173-RA 1..216 767..982 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 18:44:34 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:39:21 Download gff for GH06385.complete
Subject Subject Range Query Range Percent Splice Strand
CG43173-RA 1..1167 1..1167 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 18:44:34 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:46:46 Download gff for GH06385.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17934008..17934345 1..338 100 -> Plus
3L 17934744..17935572 339..1167 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:46:46 Download gff for GH06385.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17934008..17934345 1..338 100 -> Plus
3L 17934744..17935572 339..1167 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:46:46 Download gff for GH06385.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17934008..17934345 1..338 100 -> Plus
3L 17934744..17935572 339..1167 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:39:21 Download gff for GH06385.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17927108..17927445 1..338 100 -> Plus
arm_3L 17927844..17928672 339..1167 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:16:56 Download gff for GH06385.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17927108..17927445 1..338 100 -> Plus
3L 17927844..17928672 339..1167 100   Plus

GH06385.pep Sequence

Translation from 766 to 981

> GH06385.pep
MYVCMSNIYVQESGPVQQTPLNSIRSNDTSPGPTIRTQPHFLLRAYVHPC
HPNISLSLLHPLAVEGLTVVL*
Sequence GH06385.pep has no blast hits.

GH06385.hyp Sequence

Translation from 766 to 981

> GH06385.hyp
MYVCMSNIYVQESGPVQQTPLNSIRSNDTSPGPTIRTQPHFLLRAYVHPC
HPNISLSLLHPLAVEGLTVVL*
Sequence GH06385.hyp has no blast hits.