GH06388.complete Sequence
803 bp (803 high quality bases) assembled on 2002-07-13
GenBank Submission: BT001399
> GH06388.complete
CAAAATAAGGTCTTGGCGCAAAGTGTGCCTAGAGGAGCACAGGAGAGTTT
ACATACCTTAAAAGGTTATACCACAAGGACTAGATCAATGCAGCGATCAC
TGTTACTACTGGCCGTGTCAGCCATCCTTTTCTGTGCTGCAGTGGCTCTG
CCCTCAAGACTAACCAAATCCGAGGAGGATTGGCTGGAGCAGATGCTGAC
GCTGAGCGAAGACAGCGGTGAACTGCAGGACCTGGACGAGAGCACCGGAA
TCCATATTATCAAACGATCTGCCAAGGATGCCAGCAGCTCATCTGAGGAG
CATAATGACAAAGCCAAAGACAAGGCCAAGAACAAGGCGGACAGCTCCGG
CGATTCCTCCTCCGAGGAAAAGACAACACCAGCTGCGGTAGAAGAAACAA
CTACGGAGCACACTGCTAGGAAACGCAGAAGCACGGAGGATACGATGGTG
CGATCCTTTTGCCAGTCACTGAAAGAATTCGATATTAAGAATTTCAATCT
ACAATCTGCATATGACCGGGCCGTAAGCTTTTGTAAGCAAAGGGAGTCTA
GACGAAGACGCCAGGCTGCCGATCAGAAATCCAGCGATGCGCCGGACCTG
GATGCCCAGGCTGAGAAGGAACTGGACGAGCAGATGGCGCAGGCTGTGGC
GGAGCTTTTGAAGGACAAGGACAACACCAGCATCGAAGACTACGCCCAGG
GATGCGAGGTCATGGAGGTTAGCTCCAAAGAGGCCAACGAGGCCACCTAT
GCCGAATGATTTTGAATAAACATAAATAACATTAAAAAAAAAAAAAAAAA
AAA
GH06388.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:19:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4716-RA | 864 | CG4716-RA | 14..797 | 1..784 | 3920 | 100 | Plus |
CG4716.a | 884 | CG4716.a | 97..543 | 1..447 | 2235 | 100 | Plus |
CG4716-RB | 720 | CG4716-RB | 97..543 | 1..447 | 2235 | 100 | Plus |
CG4716.a | 884 | CG4716.a | 543..800 | 527..784 | 1290 | 100 | Plus |
CG4716-RB | 720 | CG4716-RB | 543..720 | 527..704 | 890 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:03:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 9143957..9144739 | 1..783 | 3885 | 99.7 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:34:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:03:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13256596..13257379 | 1..784 | 3920 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:58:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 13257795..13258578 | 1..784 | 3920 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 00:03:36 has no hits.
GH06388.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:04:30 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 9143957..9144739 | 1..783 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:20:40 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4716-RA | 1..672 | 88..759 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:49:53 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4716-RA | 1..672 | 88..759 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:10:51 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4716-RA | 1..672 | 88..759 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:41:09 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4716-RA | 1..672 | 88..759 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:57:10 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4716-RA | 1..672 | 88..759 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:02:42 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4716-RA | 14..796 | 1..783 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:49:53 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4716-RA | 14..796 | 1..783 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:10:51 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4716-RA | 14..796 | 1..783 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:41:09 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4716-RA | 14..796 | 1..783 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:57:10 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4716-RA | 10..792 | 1..783 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:30 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13256596..13257378 | 1..783 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:30 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13256596..13257378 | 1..783 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:30 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13256596..13257378 | 1..783 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:10:51 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9144101..9144883 | 1..783 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:11:39 Download gff for
GH06388.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13257795..13258577 | 1..783 | 100 | | Plus |
GH06388.hyp Sequence
Translation from 1 to 758
> GH06388.hyp
QNKVLAQSVPRGAQESLHTLKGYTTRTRSMQRSLLLLAVSAILFCAAVAL
PSRLTKSEEDWLEQMLTLSEDSGELQDLDESTGIHIIKRSAKDASSSSEE
HNDKAKDKAKNKADSSGDSSSEEKTTPAAVEETTTEHTARKRRSTEDTMV
RSFCQSLKEFDIKNFNLQSAYDRAVSFCKQRESRRRRQAADQKSSDAPDL
DAQAEKELDEQMAQAVAELLKDKDNTSIEDYAQGCEVMEVSSKEANEATY
AE*
GH06388.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:21:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4716-PC | 223 | CG4716-PC | 1..223 | 30..252 | 1106 | 100 | Plus |
CG4716-PA | 223 | CG4716-PA | 1..223 | 30..252 | 1106 | 100 | Plus |
CG4716-PB | 122 | CG4716-PB | 1..121 | 30..150 | 590 | 99.2 | Plus |
GH06388.pep Sequence
Translation from 87 to 758
> GH06388.pep
MQRSLLLLAVSAILFCAAVALPSRLTKSEEDWLEQMLTLSEDSGELQDLD
ESTGIHIIKRSAKDASSSSEEHNDKAKDKAKNKADSSGDSSSEEKTTPAA
VEETTTEHTARKRRSTEDTMVRSFCQSLKEFDIKNFNLQSAYDRAVSFCK
QRESRRRRQAADQKSSDAPDLDAQAEKELDEQMAQAVAELLKDKDNTSIE
DYAQGCEVMEVSSKEANEATYAE*
GH06388.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:19:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF13685-PA | 207 | GF13685-PA | 1..206 | 1..221 | 208 | 35.9 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:19:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20372-PA | 210 | GG20372-PA | 1..210 | 1..223 | 673 | 69.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4716-PC | 223 | CG4716-PC | 1..223 | 1..223 | 1106 | 100 | Plus |
CG4716-PA | 223 | CG4716-PA | 1..223 | 1..223 | 1106 | 100 | Plus |
CG4716-PB | 122 | CG4716-PB | 1..121 | 1..121 | 590 | 99.2 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 19:19:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL11003-PA | 253 | GL11003-PA | 62..253 | 48..223 | 206 | 41.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:19:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA24565-PA | 253 | GA24565-PA | 139..253 | 62..223 | 183 | 41.1 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:19:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM21459-PA | 218 | GM21459-PA | 1..218 | 1..223 | 833 | 80.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:19:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD10957-PA | 223 | GD10957-PA | 1..223 | 1..223 | 862 | 82.1 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 19:19:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK17979-PA | 313 | GK17979-PA | 233..313 | 155..223 | 160 | 51.2 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:19:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE12531-PA | 220 | GE12531-PA | 1..220 | 1..223 | 719 | 70.1 | Plus |