![]() | BDGP Sequence Production Resources |
Search the DGRC for GH06474
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 64 |
Well: | 74 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4377-RA |
Protein status: | GH06474.pep: gold |
Preliminary Size: | 930 |
Sequenced Size: | 795 |
Gene | Date | Evidence |
---|---|---|
CG4377 | 2001-01-01 | Release 2 assignment |
CG4377 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4377 | 2003-03-19 | Blastp of sequenced clone |
CG4377 | 2008-04-29 | Release 5.5 accounting |
CG4377 | 2008-08-15 | Release 5.9 accounting |
CG4377 | 2008-12-18 | 5.12 accounting |
795 bp (795 high quality bases) assembled on 2003-03-19
GenBank Submission: AY060639
> GH06474.complete TTGGAAGCTCTTCAAAAATGTTGCAATCGGGCAAATTTGTTATACTACTG GCTTTATTCCTGGCTTCACGGGAAATCTCAGGAGAAATTTCTAGGGAGGT GCGCAATTCAGCTGAATCGCCAAAATGTTACAGCTGTGAAGGCATAAATT GTTCGAGAACCACTCGTCAAAACGCCACCGTTAGCTGTTCTGATAGACTG GACGTTTGCGTCACCATTTATGAGGATTTTGCTGTTAGTGAGCGCGGTTG CTTTTCTCAAATCTCTTTGGCTGGTCAAGCGAAATGTGCGGCCAAGGACG ATCAATGTCAAAAGTGCAGTGGACAGCTGTGCAATAATGTAGGACGCAGG GATTTCAAATGCATTCAATGCATTGGTTCTGATTCAGCTGATTGCAACAA GGGTGCCACCGCCTCCTTGGCCGCCACCCAATGTGCCCTCCCCACCTCCG CCAATTCCTACTGTTATGTCAAGGTAGTCGGCGATCAGAAGGACAGCCTC CAGAGAGGATGTGCTCTTTCTGTTAAGGAGCAGAAGGCCTGCTTGGAGGA CTCGAAATGCTCGCTCTGCCTGCCGGAAAACTCCAGCGACTCCGTGGCCT GCAACAACTACGATTTGGAATTGGGACCCAAGTCCTCAGCTGAGCAAAGT AAAAAACTCTTGAGCTACGGGTTGGCTTTCTTTGCCCTGCTCTCGCTTAA ATTGCTGAATTAAATTTTAAATAAATATATGTAAATAAAGCGAATAATCA CTTGCTTACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4377-RA | 815 | CG4377-RA | 51..813 | 1..763 | 3815 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17721854..17722231 | 761..384 | 1890 | 100 | Minus |
chr2R | 21145070 | chr2R | 17722509..17722736 | 228..1 | 1140 | 100 | Minus |
chr2R | 21145070 | chr2R | 17722296..17722450 | 383..229 | 775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21835446..21835825 | 763..384 | 1900 | 100 | Minus |
2R | 25286936 | 2R | 21836103..21836330 | 228..1 | 1140 | 100 | Minus |
2R | 25286936 | 2R | 21835890..21836044 | 383..229 | 775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21836645..21837024 | 763..384 | 1900 | 100 | Minus |
2R | 25260384 | 2R | 21837302..21837529 | 228..1 | 1140 | 100 | Minus |
2R | 25260384 | 2R | 21837089..21837243 | 383..229 | 775 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17721854..17722231 | 384..761 | 91 | <- | Minus |
chr2R | 17722296..17722450 | 229..383 | 100 | <- | Minus |
chr2R | 17722509..17722736 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4377-RA | 1..696 | 18..713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4377-RA | 1..696 | 18..713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4377-RA | 1..696 | 18..713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4377-RA | 1..696 | 18..713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4377-RA | 1..696 | 18..713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4377-RA | 1..761 | 1..761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4377-RA | 1..761 | 1..761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4377-RA | 28..788 | 1..761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4377-RA | 1..761 | 1..761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4377-RA | 28..788 | 1..761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21835890..21836044 | 229..383 | 100 | <- | Minus |
2R | 21836103..21836330 | 1..228 | 100 | Minus | |
2R | 21835448..21835825 | 384..761 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21835890..21836044 | 229..383 | 100 | <- | Minus |
2R | 21836103..21836330 | 1..228 | 100 | Minus | |
2R | 21835448..21835825 | 384..761 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21835890..21836044 | 229..383 | 100 | <- | Minus |
2R | 21836103..21836330 | 1..228 | 100 | Minus | |
2R | 21835448..21835825 | 384..761 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17722953..17723330 | 384..761 | 100 | <- | Minus |
arm_2R | 17723395..17723549 | 229..383 | 100 | <- | Minus |
arm_2R | 17723608..17723835 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21837302..21837529 | 1..228 | 100 | Minus | |
2R | 21836647..21837024 | 384..761 | 100 | <- | Minus |
2R | 21837089..21837243 | 229..383 | 100 | <- | Minus |
Translation from 2 to 712
> GH06474.hyp GSSSKMLQSGKFVILLALFLASREISGEISREVRNSAESPKCYSCEGINC SRTTRQNATVSCSDRLDVCVTIYEDFAVSERGCFSQISLAGQAKCAAKDD QCQKCSGQLCNNVGRRDFKCIQCIGSDSADCNKGATASLAATQCALPTSA NSYCYVKVVGDQKDSLQRGCALSVKEQKACLEDSKCSLCLPENSSDSVAC NNYDLELGPKSSAEQSKKLLSYGLAFFALLSLKLLN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4377-PA | 231 | CG4377-PA | 1..231 | 6..236 | 1201 | 100 | Plus |
CG4363-PA | 199 | CG4363-PA | 30..183 | 42..201 | 322 | 41.2 | Plus |
CG34040-PA | 281 | CG34040-PA | 23..174 | 39..191 | 286 | 36.3 | Plus |
Translation from 17 to 712
> GH06474.pep MLQSGKFVILLALFLASREISGEISREVRNSAESPKCYSCEGINCSRTTR QNATVSCSDRLDVCVTIYEDFAVSERGCFSQISLAGQAKCAAKDDQCQKC SGQLCNNVGRRDFKCIQCIGSDSADCNKGATASLAATQCALPTSANSYCY VKVVGDQKDSLQRGCALSVKEQKACLEDSKCSLCLPENSSDSVACNNYDL ELGPKSSAEQSKKLLSYGLAFFALLSLKLLN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11610-PA | 225 | GF11610-PA | 1..225 | 1..231 | 796 | 66.7 | Plus |
Dana\GF11611-PA | 199 | GF11611-PA | 30..185 | 37..201 | 297 | 43 | Plus |
Dana\GF11614-PA | 231 | GF11614-PA | 24..219 | 34..231 | 224 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20739-PA | 231 | GG20739-PA | 1..231 | 1..231 | 1100 | 91.8 | Plus |
Dere\GG20740-PA | 199 | GG20740-PA | 30..173 | 37..186 | 273 | 42 | Plus |
Dere\GG20741-PA | 309 | GG20741-PA | 23..174 | 34..186 | 236 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20772-PA | 222 | GH20772-PA | 3..204 | 2..213 | 556 | 55.4 | Plus |
Dgri\GH20773-PA | 203 | GH20773-PA | 28..188 | 37..200 | 289 | 40.6 | Plus |
Dgri\GH20774-PA | 273 | GH20774-PA | 24..186 | 34..201 | 227 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4377-PA | 231 | CG4377-PA | 1..231 | 1..231 | 1201 | 100 | Plus |
CG4363-PA | 199 | CG4363-PA | 30..183 | 37..196 | 322 | 41.2 | Plus |
CG34040-PA | 281 | CG34040-PA | 23..174 | 34..186 | 286 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20855-PA | 221 | GI20855-PA | 1..206 | 1..215 | 562 | 54 | Plus |
Dmoj\GI20856-PA | 201 | GI20856-PA | 28..188 | 37..202 | 305 | 43.7 | Plus |
Dmoj\GI20858-PA | 271 | GI20858-PA | 24..186 | 34..201 | 240 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17510-PA | 228 | GL17510-PA | 4..211 | 2..214 | 688 | 63.8 | Plus |
Dper\GL17511-PA | 196 | GL17511-PA | 27..170 | 37..186 | 243 | 40 | Plus |
Dper\GL17512-PA | 237 | GL17512-PA | 27..176 | 36..188 | 213 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18144-PA | 228 | GA18144-PA | 4..211 | 2..214 | 692 | 64.3 | Plus |
Dpse\GA18134-PA | 196 | GA18134-PA | 27..170 | 37..186 | 244 | 40 | Plus |
Dpse\GA24185-PA | 285 | GA24185-PA | 27..174 | 36..186 | 214 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15682-PA | 231 | GM15682-PA | 1..231 | 1..231 | 1140 | 94.8 | Plus |
Dsec\GM15683-PA | 199 | GM15683-PA | 30..173 | 37..186 | 254 | 41.3 | Plus |
Dsec\GM15684-PA | 289 | GM15684-PA | 23..174 | 34..186 | 231 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25161-PA | 231 | GD25161-PA | 1..231 | 1..231 | 1147 | 95.2 | Plus |
Dsim\GD25162-PA | 199 | GD25162-PA | 30..173 | 37..186 | 257 | 42.7 | Plus |
Dsim\GD25163-PA | 281 | GD25163-PA | 23..174 | 34..186 | 240 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20590-PA | 222 | GJ20590-PA | 1..195 | 1..202 | 549 | 56.7 | Plus |
Dvir\GJ20591-PA | 201 | GJ20591-PA | 28..186 | 37..200 | 269 | 39.4 | Plus |
Dvir\GJ20593-PA | 279 | GJ20593-PA | 11..186 | 9..201 | 255 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15645-PA | 209 | GK15645-PA | 17..195 | 32..216 | 552 | 59.1 | Plus |
Dwil\GK15646-PA | 197 | GK15646-PA | 28..183 | 37..201 | 300 | 43 | Plus |
Dwil\GK19090-PA | 255 | GK19090-PA | 25..179 | 36..201 | 234 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13671-PA | 231 | GE13671-PA | 1..217 | 1..217 | 990 | 87.6 | Plus |
Dyak\GE13673-PA | 310 | GE13673-PA | 9..174 | 9..186 | 236 | 34.1 | Plus |
Dyak\GE13672-PA | 199 | GE13672-PA | 30..173 | 37..186 | 235 | 43.4 | Plus |