BDGP Sequence Production Resources |
Search the DGRC for GH06546
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 65 |
Well: | 46 |
Vector: | pOT2 |
Associated Gene/Transcript | CtsB1-RA |
Protein status: | GH06546.pep: gold |
Preliminary Size: | 1354 |
Sequenced Size: | 1353 |
Gene | Date | Evidence |
---|---|---|
CG10992 | 2001-01-01 | Release 2 assignment |
CG10992 | 2001-10-10 | Blastp of sequenced clone |
CG10992 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10992 | 2008-04-29 | Release 5.5 accounting |
CG10992 | 2008-08-15 | Release 5.9 accounting |
CG10992 | 2008-12-18 | 5.12 accounting |
1353 bp (1353 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060640
> GH06546.complete CATTACCCGTCCGAATTTCACGGGCAGTACGAAAACAAGAACGGAGCAGA GAGCCCGCTTAATACGACGCGTCATTTTCCACCATTTTACTGCTGTGATT TGTTTGAATTTTGCTGTGTCAGCGCATTGGAAATTCGTTGGACAAGAATA ATGAATCTATTGCTCCTGGTGGCCACCGCGGCCTCCGTGGCGGCACTCAC GTCCGGTGAGCCGTCACTGCTCTCGGATGAGTTCATCGAGGTGGTGCGCA GTAAGGCCAAAACCTGGACGGTGGGTCGCAATTTCGATGCATCCGTAACG GAGGGACATATTCGCCGCCTGATGGGCGTCCATCCGGATGCGCACAAGTT CGCACTGCCCGACAAGCGTGAAGTTCTTGGCGATCTATACGTGAATAGCG TTGACGAACTTCCCGAAGAGTTCGATTCCCGCAAGCAATGGCCAAACTGC CCAACCATTGGCGAGATTCGCGACCAGGGTTCATGCGGCTCCTGCTGGGC CTTTGGTGCCGTGGAAGCCATGTCCGATCGCGTGTGCATCCATTCCGGCG GCAAGGTGAATTTCCACTTTTCGGCCGATGATCTCGTCTCCTGCTGCCAC ACCTGCGGATTTGGCTGCAATGGCGGTTTCCCCGGCGCCGCCTGGAGCTA CTGGACGCGCAAGGGAATCGTCAGCGGAGGACCCTACGGATCTAATCAGG GCTGCCGTCCTTACGAGATTTCTCCCTGTGAGCACCATGTGAATGGAACC CGACCACCATGTGCCCATGGCGGTAGAACGCCCAAGTGTTCGCACGTCTG CCAGAGCGGTTACACCGTCGATTATGCCAAGGACAAGCACTTCGGCTCCA AGTCGTACTCGGTGAGGCGTAATGTGCGTGAAATTCAGGAGGAGATCATG ACCAATGGACCGGTTGAGGGCGCCTTCACCGTTTATGAGGATCTCATTCT GTACAAGGACGGTGTCTATCAGCACGAGCATGGCAAGGAGCTGGGCGGTC ATGCCATTCGCATTTTGGGCTGGGGCGTTTGGGGCGAGGAGAAGATTCCG TACTGGCTAATTGGTAACTCGTGGAACACCGATTGGGGCGATCATGGTTT CTTCCGCATCCTGCGTGGCCAGGATCATTGCGGCATCGAGAGCTCCATTT CGGCGGGTCTGCCCAAGCTGTAAATGTTATATGTATTCCGGCATCAAGCT GATATATCAAAACCCCTCTATTTTCTATCATCCCTCCTTTTATTTTCATT CCGATTCGCAACTGACGTTTGTAGTTAATGTAAACAACCTAAACCTGATT GATAATAAAGTATTGTATATGACTGTGGAACTGTAAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13670745..13671382 | 1334..697 | 3190 | 100 | Minus |
chrX | 22417052 | chrX | 13672537..13672808 | 272..1 | 1360 | 100 | Minus |
chrX | 22417052 | chrX | 13672200..13672463 | 533..270 | 1320 | 100 | Minus |
chrX | 22417052 | chrX | 13671887..13672055 | 700..532 | 845 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 13780015..13780653 | 1335..697 | 3195 | 100 | Minus |
X | 23542271 | X | 13781808..13782079 | 272..1 | 1360 | 100 | Minus |
X | 23542271 | X | 13781471..13781734 | 533..270 | 1320 | 100 | Minus |
X | 23542271 | X | 13781158..13781326 | 700..532 | 845 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13788113..13788751 | 1335..697 | 3195 | 100 | Minus |
X | 23527363 | X | 13789906..13790177 | 272..1 | 1360 | 100 | Minus |
X | 23527363 | X | 13789569..13789832 | 533..270 | 1320 | 100 | Minus |
X | 23527363 | X | 13789256..13789424 | 700..532 | 845 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13670745..13671379 | 700..1334 | 100 | <- | Minus |
chrX | 13671888..13672055 | 532..699 | 100 | <- | Minus |
chrX | 13672202..13672462 | 271..531 | 100 | <- | Minus |
chrX | 13672539..13672808 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10992-RA | 1..1023 | 151..1173 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10992-RA | 1..1023 | 151..1173 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CtsB1-RA | 1..1023 | 151..1173 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10992-RA | 1..1023 | 151..1173 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CtsB1-RA | 1..1023 | 151..1173 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10992-RA | 103..1434 | 1..1332 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10992-RA | 103..1434 | 1..1332 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CtsB1-RA | 1..1334 | 1..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10992-RA | 103..1434 | 1..1332 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CtsB1-RA | 92..1425 | 1..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13780016..13780650 | 700..1334 | 100 | <- | Minus |
X | 13781159..13781326 | 532..699 | 100 | <- | Minus |
X | 13781473..13781733 | 271..531 | 100 | <- | Minus |
X | 13781810..13782079 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13780016..13780650 | 700..1334 | 100 | <- | Minus |
X | 13781159..13781326 | 532..699 | 100 | <- | Minus |
X | 13781473..13781733 | 271..531 | 100 | <- | Minus |
X | 13781810..13782079 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13780016..13780650 | 700..1334 | 100 | <- | Minus |
X | 13781159..13781326 | 532..699 | 100 | <- | Minus |
X | 13781473..13781733 | 271..531 | 100 | <- | Minus |
X | 13781810..13782079 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13674049..13674683 | 700..1334 | 100 | <- | Minus |
arm_X | 13675192..13675359 | 532..699 | 100 | <- | Minus |
arm_X | 13675506..13675766 | 271..531 | 100 | <- | Minus |
arm_X | 13675843..13676112 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13788114..13788748 | 700..1334 | 100 | <- | Minus |
X | 13789257..13789424 | 532..699 | 100 | <- | Minus |
X | 13789571..13789831 | 271..531 | 100 | <- | Minus |
X | 13789908..13790177 | 1..270 | 100 | Minus |
Translation from 1 to 1172
> GH06546.hyp HYPSEFHGQYENKNGAESPLNTTRHFPPFYCCDLFEFCCVSALEIRWTRI MNLLLLVATAASVAALTSGEPSLLSDEFIEVVRSKAKTWTVGRNFDASVT EGHIRRLMGVHPDAHKFALPDKREVLGDLYVNSVDELPEEFDSRKQWPNC PTIGEIRDQGSCGSCWAFGAVEAMSDRVCIHSGGKVNFHFSADDLVSCCH TCGFGCNGGFPGAAWSYWTRKGIVSGGPYGSNQGCRPYEISPCEHHVNGT RPPCAHGGRTPKCSHVCQSGYTVDYAKDKHFGSKSYSVRRNVREIQEEIM TNGPVEGAFTVYEDLILYKDGVYQHEHGKELGGHAIRILGWGVWGEEKIP YWLIGNSWNTDWGDHGFFRILRGQDHCGIESSISAGLPKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CtsB1-PC | 340 | CG10992-PC | 1..340 | 51..390 | 1893 | 100 | Plus |
CtsB1-PA | 340 | CG10992-PA | 1..340 | 51..390 | 1893 | 100 | Plus |
Swim-PA | 431 | CG3074-PA | 182..420 | 132..388 | 366 | 35.2 | Plus |
Swim-PB | 431 | CG3074-PB | 182..420 | 132..388 | 366 | 35.2 | Plus |
CG12163-PB | 475 | CG12163-PB | 254..473 | 136..387 | 236 | 27.6 | Plus |
Translation from 150 to 1172
> GH06546.pep MNLLLLVATAASVAALTSGEPSLLSDEFIEVVRSKAKTWTVGRNFDASVT EGHIRRLMGVHPDAHKFALPDKREVLGDLYVNSVDELPEEFDSRKQWPNC PTIGEIRDQGSCGSCWAFGAVEAMSDRVCIHSGGKVNFHFSADDLVSCCH TCGFGCNGGFPGAAWSYWTRKGIVSGGPYGSNQGCRPYEISPCEHHVNGT RPPCAHGGRTPKCSHVCQSGYTVDYAKDKHFGSKSYSVRRNVREIQEEIM TNGPVEGAFTVYEDLILYKDGVYQHEHGKELGGHAIRILGWGVWGEEKIP YWLIGNSWNTDWGDHGFFRILRGQDHCGIESSISAGLPKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22391-PA | 342 | GF22391-PA | 3..341 | 4..340 | 1484 | 80.3 | Plus |
Dana\GF12327-PA | 431 | GF12327-PA | 180..419 | 81..338 | 337 | 34.2 | Plus |
Dana\GF16067-PA | 620 | GF16067-PA | 399..619 | 86..337 | 214 | 28.6 | Plus |
Dana\GF13722-PA | 417 | GF13722-PA | 200..416 | 87..337 | 213 | 30.7 | Plus |
Dana\GF13132-PA | 392 | GF13132-PA | 176..385 | 87..331 | 197 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19486-PA | 340 | GG19486-PA | 1..340 | 1..340 | 1742 | 94.1 | Plus |
Dere\GG20712-PA | 431 | GG20712-PA | 127..420 | 23..338 | 338 | 30.9 | Plus |
Dere\GG20691-PA | 378 | GG20691-PA | 131..374 | 54..334 | 228 | 27.7 | Plus |
Dere\GG11133-PA | 615 | GG11133-PA | 394..614 | 86..337 | 226 | 29.4 | Plus |
Dere\GG20414-PA | 341 | GG20414-PA | 124..340 | 87..337 | 215 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17748-PA | 340 | GH17748-PA | 1..340 | 1..340 | 1413 | 75.2 | Plus |
Dgri\GH20676-PA | 432 | GH20676-PA | 181..423 | 81..340 | 356 | 34.6 | Plus |
Dgri\GH22731-PA | 617 | GH22731-PA | 396..616 | 86..337 | 227 | 30.2 | Plus |
Dgri\GH23906-PA | 358 | GH23906-PA | 143..354 | 87..334 | 214 | 27.5 | Plus |
Dgri\GH21411-PA | 391 | GH21411-PA | 176..387 | 87..334 | 214 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CtsB1-PC | 340 | CG10992-PC | 1..340 | 1..340 | 1893 | 100 | Plus |
CtsB1-PA | 340 | CG10992-PA | 1..340 | 1..340 | 1893 | 100 | Plus |
Swim-PA | 431 | CG3074-PA | 182..420 | 82..338 | 366 | 35.2 | Plus |
Swim-PB | 431 | CG3074-PB | 182..420 | 82..338 | 366 | 35.2 | Plus |
CG12163-PB | 475 | CG12163-PB | 254..473 | 86..337 | 236 | 27.6 | Plus |
CG12163-PA | 614 | CG12163-PA | 393..612 | 86..337 | 236 | 27.6 | Plus |
CG4847-PE | 390 | CG4847-PE | 173..386 | 87..334 | 228 | 28.1 | Plus |
CG4847-PC | 390 | CG4847-PC | 173..386 | 87..334 | 228 | 28.1 | Plus |
CG4847-PA | 390 | CG4847-PA | 173..386 | 87..334 | 228 | 28.1 | Plus |
CG4847-PD | 420 | CG4847-PD | 203..416 | 87..334 | 228 | 28.1 | Plus |
CG6347-PA | 352 | CG6347-PA | 130..348 | 87..334 | 191 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15503-PA | 342 | GI15503-PA | 23..342 | 20..340 | 1470 | 83.5 | Plus |
Dmoj\GI19039-PA | 432 | GI19039-PA | 127..422 | 23..340 | 348 | 31.8 | Plus |
Dmoj\GI18587-PA | 366 | GI18587-PA | 89..362 | 24..334 | 233 | 26.8 | Plus |
Dmoj\GI10216-PA | 605 | GI10216-PA | 384..604 | 86..337 | 226 | 31.2 | Plus |
Dmoj\GI21205-PA | 339 | GI21205-PA | 121..338 | 86..337 | 214 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19846-PA | 329 | GL19846-PA | 1..329 | 1..340 | 1467 | 80.9 | Plus |
Dper\GL16940-PA | 433 | GL16940-PA | 172..422 | 70..338 | 331 | 33.3 | Plus |
Dper\GL22196-PA | 627 | GL22196-PA | 406..626 | 86..337 | 230 | 30.2 | Plus |
Dper\GL11434-PA | 372 | GL11434-PA | 156..363 | 87..329 | 225 | 28.9 | Plus |
Dper\GL17172-PA | 341 | GL17172-PA | 124..340 | 87..337 | 212 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10694-PA | 338 | GA10694-PA | 1..338 | 1..340 | 1554 | 84.4 | Plus |
Dpse\GA15908-PA | 433 | GA15908-PA | 172..422 | 70..338 | 331 | 33.3 | Plus |
Dpse\GA27408-PA | 629 | GA27408-PA | 408..628 | 86..337 | 230 | 30.2 | Plus |
Dpse\GA27408-PB | 477 | GA27408-PB | 256..476 | 86..337 | 228 | 30.2 | Plus |
Dpse\GA18475-PA | 372 | GA18475-PA | 156..363 | 87..329 | 227 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17589-PA | 340 | GM17589-PA | 1..340 | 1..340 | 1769 | 96.8 | Plus |
Dsec\GM15657-PA | 431 | GM15657-PA | 127..420 | 23..338 | 345 | 32.1 | Plus |
Dsec\GM10654-PA | 615 | GM10654-PA | 394..614 | 86..337 | 236 | 29.4 | Plus |
Dsec\GM21790-PA | 382 | GM21790-PA | 135..378 | 54..334 | 213 | 28 | Plus |
Dsec\GM21500-PA | 341 | GM21500-PA | 73..340 | 38..337 | 210 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15875-PA | 340 | GD15875-PA | 1..340 | 1..340 | 1784 | 97.6 | Plus |
Dsim\GD25141-PA | 484 | GD25141-PA | 127..420 | 23..338 | 345 | 32.1 | Plus |
Dsim\GD11280-PA | 382 | GD11280-PA | 135..378 | 54..334 | 223 | 27.7 | Plus |
Dsim\GD10995-PA | 341 | GD10995-PA | 73..340 | 38..337 | 210 | 28.3 | Plus |
Dsim\GD10987-PA | 352 | GD10987-PA | 130..348 | 87..334 | 186 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19262-PA | 338 | GJ19262-PA | 1..338 | 1..340 | 1477 | 79.4 | Plus |
Dvir\GJ20006-PA | 432 | GJ20006-PA | 127..421 | 23..338 | 364 | 31.6 | Plus |
Dvir\GJ20385-PA | 370 | GJ20385-PA | 102..366 | 33..334 | 246 | 27.8 | Plus |
Dvir\GJ11017-PA | 599 | GJ11017-PA | 378..597 | 86..337 | 234 | 30.3 | Plus |
Dvir\GJ20806-PA | 339 | GJ20806-PA | 121..338 | 86..337 | 208 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16352-PA | 340 | GK16352-PA | 7..340 | 2..340 | 1439 | 78.8 | Plus |
Dwil\GK24603-PA | 341 | GK24603-PA | 8..341 | 3..340 | 1069 | 56.6 | Plus |
Dwil\GK20838-PA | 432 | GK20838-PA | 129..421 | 23..338 | 337 | 32.3 | Plus |
Dwil\GK14287-PA | 610 | GK14287-PA | 389..608 | 86..337 | 238 | 28.6 | Plus |
Dwil\GK22909-PA | 370 | GK22909-PA | 154..361 | 87..329 | 222 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16138-PA | 340 | GE16138-PA | 1..340 | 1..340 | 1776 | 96.8 | Plus |
Dyak\GE11695-PA | 431 | GE11695-PA | 127..420 | 23..338 | 348 | 31.7 | Plus |
Dyak\GE25302-PA | 615 | GE25302-PA | 394..614 | 86..337 | 233 | 29.4 | Plus |
Dyak\GE12574-PA | 341 | GE12574-PA | 73..340 | 38..337 | 214 | 28.7 | Plus |
Dyak\GE11675-PA | 384 | GE11675-PA | 167..380 | 87..334 | 212 | 27.6 | Plus |