Clone GH06691 Report

Search the DGRC for GH06691

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:66
Well:91
Vector:pOT2
Associated Gene/TranscriptCG11811-RA
Protein status:GH06691.pep: gold
Preliminary Size:1975
Sequenced Size:1981

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11811 2001-11-09 Blastp of sequenced clone
CG11811 2008-04-29 Release 5.5 accounting
CG11811 2008-08-15 Release 5.9 accounting
CG11811 2008-12-18 5.12 accounting

Clone Sequence Records

GH06691.complete Sequence

1981 bp (1981 high quality bases) assembled on 2001-11-09

GenBank Submission: AY070835

> GH06691.complete
AACCATGGCGATCACAGTGCCGCGCAAAGAAACGCCACGACCGAAAGTCA
CATCTCCGCTCACGGTCAAGTGATCCAGCTCAATGATGTCCGGGATGTTG
GCAAAGCGACCCAGGAACTCCTTGACCTTCGAGAAGTGGTTCTCTCCCAG
CTTGACGAGCGGCGTGGTAGGGAACATTCGCTGTGGCGACATTACCAGGC
TGCCGTTCTTAAGCGTATATAAATTTGACATGACCAGCAGCAGATCTGAA
GATTTCTTCACGGGCAAGAAACGGGAACGCGGCACATTGATGCCGATGGC
GCCATCAAAGCACTTCATGGCCGCACCCACAGCAGTCTCCAGCTGAATGA
CACGGGTTCCGTTCTCCAGCGTCTTGTTGTTCACAATAATTTCCATGTTT
AAGGTACGCCTCGTGCCGAATTCGGCACGAGAAAAGAACTAAACCAGCTT
TTTTGGCCCCCATTTGTGTTGTTGGTGCTGTTCTGTGCGAATAAAAGGCC
ACGCGATGATAAGCTTTCTGTTCATTGTAAATCGGGCGCTCAGCAGCAGC
AGCAGCAGTAGCAGTGCAGCGGCATCCTTAACGAGCAAGAAGATGACCGC
CCCCGGGCCACGCCCCCTTGTCCTATGCGGTCCCTCGGGATCCGGAAAGA
GTACGCTGCTGAAAAGGCTATTCGCCGAATTCCCCAGCACCTTTGGCTTC
AGCATATCGCACACCACGCGGAAGCCGCGTGAGGGCGAGGAGCATGGCGT
GCACTACTATTTTGTGGAACGTCCGGAAATGGAGGCAGCCATCGCTGGCG
ACGAGTTCATCGAGACGGCCGAGTTTACGGGCAATCTTTATGGAACGAGC
AAGGCGGCGGTTAGAGAGATCCAGGCACAGGGACGGGTCTGCATACTGGA
CATCGAACAGAAGGGAGTGGAGCAGATCAAGCGTACGGATCTCAATCCCA
TACTGATATTCAACAATCCACCGAGCATCAAGGAGCTGGAGCGACGACTT
CGCAAACGTGGCTCCGAAACGGAGGAGTCGCTGAGCAAGCGCCTCAATGC
CGCTCAGGTGGAGCTCGATTATGGTTTGACGCCCGGCAACTTCCACAAGA
TCATCAATAACGTGGACATCGATGTGGCCTACGAGGAATTCCGCAACTTT
GTCGTCCAGGAACTCAAGGAGCAGCAGAAGCAGGGAGTATCAGTTAACTT
GAATTAAGGCGAAGCATTTTGCGGACGAATGTAGAATGATATTAACCTCA
ATGGGGTGGGGGTAGAAATTGTTTGTGAACTGATCGACGACAGGAAAAGT
AAATTATAGAAAACTTATCATTGGAAACGGCAGGAAGCTATAGGAAAACC
AGGTACTCTTTATGCATATTGTAAAGAATTTAGCTTATAAGAGAAACTTA
AAAACTTTCCGAAGATACAGAATATCAAACTTCATATTTTAACTAATAGT
TTTCTTAAATAAAATAGAAATAATACTCTCCATTCAATAATCGCATATAT
AAGAGCAATATCAAGATTTTAGTTTTATGTAGAAGCAGACTATTTTTGAA
TTCTAGGACAAACTTTGCTTATATTGTGAAAAATACTTTGTCAGCAGCAG
AATATTGTTAGTAAACAATTGCTTAGCCAGCGAACTTGACCCAATGTTTC
CAATGAAAGTAGACCATAGATTACTTTTCGTGACCCCGATGCCTGGAGCC
CCCACCCTGCAAACCACTTTGACTAATGGCATTTATACTTAAGAAATGGC
TTGTATTTATTATATACTCTCCTCCTGTCCACCTCATCATTGTTGTGCAA
ATTCGTTGTTCTAGTTGTAATTTTAAGCTGAAATTTGTTGCGCGCCGCTT
CACGGTCGAGAAAACCGGAGAGGGCGATTAAAATGGAATCAATAAAGCGA
ACATTATGCGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

GH06691.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:00:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG11811-RA 1585 CG11811-RA 86..1568 432..1914 7415 100 Plus
UGP-RC 2095 UGP-RC 1337..1736 409..10 2000 100 Minus
UGP-RA 2110 UGP-RA 1329..1728 409..10 2000 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 10682392..10683873 432..1913 7315 99.9 Plus
chr3L 24539361 chr3L 9343846..9344234 21..409 1930 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:35:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:06:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10691102..10692584 432..1914 7415 100 Plus
3L 28110227 3L 9351917..9352305 21..409 1945 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:25:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 10684202..10685684 432..1914 7415 100 Plus
3L 28103327 3L 9345017..9345405 21..409 1945 100 Plus
Blast to na_te.dros performed on 2019-03-15 19:06:17 has no hits.

GH06691.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:07:18 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 10682392..10683873 432..1913 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:21:18 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
CG11811-RA 1..702 506..1207 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:33:41 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
CG11811-RA 1..702 506..1207 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:41:20 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
CG11811-RA 1..702 506..1207 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:01:17 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
CG11811-RA 1..702 506..1207 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:09:33 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
CG11811-RA 1..702 506..1207 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:12:53 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
CG11811-RA 86..1567 432..1913 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:33:41 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
CG11811-RA 86..1567 432..1913 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:41:20 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
CG11811-RA 79..1560 432..1913 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:01:17 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
CG11811-RA 86..1567 432..1913 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:09:33 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
CG11811-RA 79..1560 432..1913 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:07:18 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10691102..10692583 432..1913 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:07:18 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10691102..10692583 432..1913 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:07:18 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10691102..10692583 432..1913 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:41:20 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10684202..10685683 432..1913 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:38:09 Download gff for GH06691.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10684202..10685683 432..1913 100   Plus

GH06691.pep Sequence

Translation from 505 to 1206

> GH06691.pep
MISFLFIVNRALSSSSSSSSAAASLTSKKMTAPGPRPLVLCGPSGSGKST
LLKRLFAEFPSTFGFSISHTTRKPREGEEHGVHYYFVERPEMEAAIAGDE
FIETAEFTGNLYGTSKAAVREIQAQGRVCILDIEQKGVEQIKRTDLNPIL
IFNNPPSIKELERRLRKRGSETEESLSKRLNAAQVELDYGLTPGNFHKII
NNVDIDVAYEEFRNFVVQELKEQQKQGVSVNLN*

GH06691.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:25:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10608-PA 235 GF10608-PA 1..235 1..233 1089 86.4 Plus
Dana\GF19077-PA 1005 GF19077-PA 816..966 36..190 248 36.2 Plus
Dana\GF14547-PA 636 GF14547-PA 410..537 36..162 246 39.8 Plus
Dana\GF20363-PA 907 GF20363-PA 688..881 36..212 240 31 Plus
Dana\GF12435-PA 556 GF12435-PA 351..477 36..162 236 37.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:25:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15450-PA 235 GG15450-PA 1..234 1..232 1091 94 Plus
Dere\GG19306-PA 1299 GG19306-PA 1099..1273 36..212 269 34.6 Plus
Dere\GG18414-PA 1004 GG18414-PA 815..965 36..190 247 36.2 Plus
Dere\GG21549-PA 636 GG21549-PA 410..537 36..162 242 39.1 Plus
Dere\GG22696-PA 595 GG22696-PA 390..516 36..162 241 39.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:25:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15906-PA 229 GH15906-PA 1..229 1..231 954 77.5 Plus
Dgri\GH24103-PA 997 GH24103-PA 797..971 36..212 267 34.6 Plus
Dgri\GH12185-PA 828 GH12185-PA 639..789 36..190 248 36.2 Plus
Dgri\GH10158-PA 636 GH10158-PA 410..537 36..162 247 39.8 Plus
Dgri\GH21953-PA 242 GH21953-PA 37..163 36..162 236 38.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:49:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG11811-PA 233 CG11811-PA 1..233 1..233 1176 100 Plus
sdt-PF 859 CG32717-PF 659..832 36..211 262 33.7 Plus
sdt-PK 879 CG32717-PK 679..852 36..211 262 33.7 Plus
sdt-PD 879 CG32717-PD 679..852 36..211 262 33.7 Plus
sdt-PH 934 CG32717-PH 734..907 36..211 262 33.7 Plus
sdt-PP 1173 CG32717-PP 973..1146 36..211 262 33.7 Plus
sdt-PI 1269 CG32717-PI 1069..1242 36..211 262 33.7 Plus
sdt-PN 1292 CG32717-PN 1092..1265 36..211 262 33.7 Plus
sdt-PB 1292 CG32717-PB 1092..1265 36..211 262 33.7 Plus
sdt-PE 1367 CG32717-PE 1167..1340 36..211 262 33.7 Plus
sdt-PO 1606 CG32717-PO 1406..1579 36..211 262 33.7 Plus
sdt-PM 1901 CG32717-PM 1701..1874 36..211 262 33.7 Plus
sdt-PG 2020 CG32717-PG 1820..1993 36..211 262 33.7 Plus
vari-PE 611 CG9326-PE 410..608 36..231 247 33 Plus
dlg1-PK 911 CG1725-PK 722..895 36..216 242 32.8 Plus
dlg1-PH 911 CG1725-PH 722..895 36..216 242 32.8 Plus
dlg1-PT 943 CG1725-PT 754..927 36..216 242 32.8 Plus
dlg1-PL 946 CG1725-PL 757..930 36..216 242 32.8 Plus
dlg1-PS 960 CG1725-PS 771..944 36..216 242 32.8 Plus
dlg1-PN 960 CG1725-PN 771..944 36..216 242 32.8 Plus
dlg1-PD 960 CG1725-PD 771..944 36..216 242 32.8 Plus
dlg1-PE 960 CG1725-PE 771..944 36..216 242 32.8 Plus
dlg1-PA 968 CG1725-PA 779..952 36..216 242 32.8 Plus
dlg1-PB 970 CG1725-PB 781..954 36..216 242 32.8 Plus
dlg1-PQ 975 CG1725-PQ 786..959 36..216 242 32.8 Plus
dlg1-PG 975 CG1725-PG 786..959 36..216 242 32.8 Plus
dlg1-PP 983 CG1725-PP 794..967 36..216 242 32.8 Plus
dlg1-PR 1001 CG1725-PR 771..944 36..216 242 32.8 Plus
metro-PD 546 CG30021-PD 341..509 36..212 238 33.5 Plus
metro-PB 556 CG30021-PB 351..519 36..212 238 33.5 Plus
metro-PC 585 CG30021-PC 380..548 36..212 238 33.5 Plus
metro-PA 595 CG30021-PA 390..558 36..212 238 33.5 Plus
sdt-PJ 1527 CG32717-PJ 1308..1500 36..211 235 30.1 Plus
sdt-PL 1941 CG32717-PL 1722..1914 36..211 235 30.1 Plus
vari-PF 469 CG9326-PF 243..370 36..162 233 39.1 Plus
vari-PC 469 CG9326-PC 243..370 36..162 233 39.1 Plus
vari-PD 615 CG9326-PD 389..516 36..162 233 39.1 Plus
vari-PB 636 CG9326-PB 410..537 36..162 233 39.1 Plus
CASK-PE 469 CG6703-PE 283..408 36..161 216 31.7 Plus
CASK-PD 591 CG6703-PD 405..530 36..161 216 31.7 Plus
CASK-PA 591 CG6703-PA 405..530 36..161 216 31.7 Plus
CASK-PG 609 CG6703-PG 423..548 36..161 216 31.7 Plus
CASK-PB 898 CG6703-PB 712..837 36..161 216 31.7 Plus
CASK-PF 916 CG6703-PF 730..855 36..161 216 31.7 Plus
CASK-PH 929 CG6703-PH 712..837 36..161 216 31.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:26:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16558-PA 223 GI16558-PA 1..223 1..231 1000 81 Plus
Dmoj\GI14373-PA 897 GI14373-PA 697..871 36..212 267 34.6 Plus
Dmoj\GI22442-PA 634 GI22442-PA 408..535 36..162 250 40.6 Plus
Dmoj\GI15716-PA 833 GI15716-PA 644..794 36..190 247 36.2 Plus
Dmoj\GI19661-PA 556 GI19661-PA 351..519 36..212 239 33.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:26:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20800-PA 221 GL20800-PA 1..221 1..233 978 79.8 Plus
Dper\GL20641-PA 596 GL20641-PA 391..517 36..162 245 39.4 Plus
Dper\GL19590-PA 637 GL19590-PA 411..538 36..162 243 39.1 Plus
Dper\GL20368-PA 918 GL20368-PA 699..892 36..212 229 31 Plus
Dper\GL23741-PA 487 GL23741-PA 303..426 38..161 223 33.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:26:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11213-PA 221 GA11213-PA 1..221 1..233 974 79.4 Plus
Dpse\GA17100-PA 1002 GA17100-PA 802..976 36..212 267 34.6 Plus
Dpse\GA26368-PA 279 GA26368-PA 90..240 36..190 245 36.2 Plus
Dpse\GA15582-PB 586 GA15582-PB 381..507 36..162 245 39.4 Plus
Dpse\GA15582-PA 596 GA15582-PA 391..517 36..162 245 39.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:26:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25224-PA 234 GM25224-PA 1..233 1..232 1192 97.4 Plus
Dsec\GM11239-PA 1309 GM11239-PA 1109..1283 36..212 269 34.6 Plus
Dsec\GM23306-PA 636 GM23306-PA 410..537 36..162 242 39.1 Plus
Dsec\GM20471-PA 593 GM20471-PA 388..514 36..162 240 38.6 Plus
Dsec\GM23693-PA 591 GM23693-PA 407..530 38..161 220 32.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:26:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14257-PA 250 GD14257-PA 1..249 1..232 1168 91.2 Plus
Dsim\GD21680-PA 644 GD21680-PA 418..545 36..162 243 39.1 Plus
Dsim\GD25940-PA 377 GD25940-PA 172..298 36..162 239 38.6 Plus
Dsim\GD18503-PA 769 GD18503-PA 583..723 36..173 222 30.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:26:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12810-PA 223 GJ12810-PA 1..223 1..231 945 77.1 Plus
Dvir\GJ19412-PA 1381 GJ19412-PA 1181..1355 36..212 268 34.6 Plus
Dvir\GJ20335-PA 634 GJ20335-PA 408..535 36..162 247 39.8 Plus
Dvir\GJ15244-PA 921 GJ15244-PA 732..882 36..190 247 36.2 Plus
Dvir\GJ15026-PA 595 GJ15026-PA 390..516 36..162 238 38.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:26:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17399-PA 228 GK17399-PA 1..228 1..233 953 83.3 Plus
Dwil\GK25185-PA 1626 GK25185-PA 1426..1600 36..212 268 34.6 Plus
Dwil\GK16229-PA 996 GK16229-PA 807..957 36..190 247 36.2 Plus
Dwil\GK24864-PA 641 GK24864-PA 415..542 36..162 245 39.1 Plus
Dwil\GK20656-PA 599 GK20656-PA 394..520 36..162 236 38.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:26:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21760-PA 236 GE21760-PA 1..235 1..232 1110 93.2 Plus
Dyak\GE15771-PA 1719 GE15771-PA 1519..1693 36..212 268 34.6 Plus
Dyak\GE15932-PA 902 GE15932-PA 713..843 36..165 246 38.1 Plus
Dyak\GE13543-PA 636 GE13543-PA 410..537 36..162 243 39.1 Plus
Dyak\GE13049-PA 315 GE13049-PA 110..278 36..212 237 33.1 Plus

GH06691.hyp Sequence

Translation from 505 to 1206

> GH06691.hyp
MISFLFIVNRALSSSSSSSSAAASLTSKKMTAPGPRPLVLCGPSGSGKST
LLKRLFAEFPSTFGFSISHTTRKPREGEEHGVHYYFVERPEMEAAIAGDE
FIETAEFTGNLYGTSKAAVREIQAQGRVCILDIEQKGVEQIKRTDLNPIL
IFNNPPSIKELERRLRKRGSETEESLSKRLNAAQVELDYGLTPGNFHKII
NNVDIDVAYEEFRNFVVQELKEQQKQGVSVNLN*

GH06691.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:22:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG11811-PA 233 CG11811-PA 1..233 1..233 1176 100 Plus
sdt-PF 859 CG32717-PF 659..832 36..211 262 33.7 Plus
sdt-PK 879 CG32717-PK 679..852 36..211 262 33.7 Plus
sdt-PD 879 CG32717-PD 679..852 36..211 262 33.7 Plus
sdt-PH 934 CG32717-PH 734..907 36..211 262 33.7 Plus