Clone GH06693 Report

Search the DGRC for GH06693

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:66
Well:93
Vector:pOT2
Associated Gene/TranscriptCG9547-RA
Protein status:GH06693.pep: gold
Preliminary Size:1420
Sequenced Size:1440

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9547 2001-01-01 Release 2 assignment
CG9547 2001-09-19 Blastp of sequenced clone
CG9547 2003-01-01 Sim4 clustering to Release 3
CG9547 2008-04-29 Release 5.5 accounting
CG9547 2008-08-15 Release 5.9 accounting
CG9547 2008-12-18 5.12 accounting

Clone Sequence Records

GH06693.complete Sequence

1440 bp (1440 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058305

> GH06693.complete
AATCGAGCAGCTGTTCCGTGGAGAACCGGCTGATCACTTCCAACAGAAAA
GACAGAACCGAATCGGAATTATGATTGCGCAAAGTGTAATCAGCAAACTG
CGACCGTGTGCCCGCCGCTTGGCCAGCACGAGCTCCAAAGCCGCAGCTCC
CAAATTCAACTGGCAGGATCCGCTGAATTTGGAGAGCCAATTGACCGAGG
AAGAGGTGGCCATTCGGGATGCGTTCCGTGGATACTGTCAGGCCGAGCTG
CAGCCGCGCGTCAAGATGGCCAATCGCCTGGAGACGTTCGACAAGAAAAT
TATGGAGGAGATCGGCAGTCTGGGTGTCCTCGGCTGCACCATTAAGGGAT
ACGGCTGCGCCGGAGTCTCTAGCGTTGCCTACGGCTTGCTCACCCGCGAG
GTGGAGCGCGTGGACTCCGCTTATCGGTCTGCTGTCAGTGTCCAGAGCTC
GCTGGCCATGGGCGCCATCTACGACTTTGGATCCGAGGAGCAGAAGCAAC
GCTATTTGCCCAGCATGGCGGAGGGCAAGCTGATTGGTGCCTTTGGCCTA
ACTGAACCCAACCACGGTAGTGACCCCGCTGGCATGGAGACCCGTGCCAA
GTACGATAGCAAAAGCAAGACATACATCCTGAACGGATCTAAGACGTGGA
TTACTAGTGCGCCCATCGCAGACGTCATAGTCGTATGGGCAAAATGCGAG
GATGGCAAGGTACGCGGCTTCCTGGTGGATCGCAAGATATCCGGCAAGGG
TTTGGAGACGCCAAAGATCGAGGGCAAGTTCTCTCTGCGTGCTTCGCCCA
CGGGTATGATCCTGATGGACGAGGTCCGTGTGCCAGAGGAGCAGTTGCTA
CCCAATGTGGCCGGCTTTAGTGGACCCTTCAGCTGTCTGAACAACGCTCG
CTATGGAATCGCGTGGGGAGCCCTGGGAGCAGCTGAAACCTGCGTGGAGA
TTGCTCGCCAGTATACACTGGATCGCAAACAATTCGGTCGTCCTTTGGCT
GCAAATCAGTTGATCCAAAAGAAGCTGGCCGATGCCATCACAGAGATTGC
GTTGGGTCTGCAGGCTTGCCTGCATGTGGGTCGCCTCAAGGATCAGAAGC
TGCACACGCCCGACATGATTTCCCTTCTAAAGCGAAACAATACTGGCAAA
TCGCTTGATATAGCGCGCCAAATGAGGGACATGCTGGGTGCAAACGGAAT
CAGCGACGAATATCATGTGATCCGCCATGTAATCAACCTGGAGTCAGTTA
ACACCTATGAGGGCACGCACGATATACACGCGTTGATCCTGGGCCGAGCC
ATCACCGGACTGGCGGCATTTGCTAACTAATGTACTTGTTTCGAAAATCA
TAAAGTACTGCATTTACCAATTTGTTTTATGTCGAAGTGTCAATGTGAAT
AAATGTTAATCAAACCGAAAAAAAAAAAAAAAAAAAAAAA

GH06693.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:24:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG9547-RA 1664 CG9547-RA 183..1601 1..1419 7095 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:56:53
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 6491957..6492838 1417..536 4410 100 Minus
chr2L 23010047 chr2L 6492961..6493499 539..1 2620 99.1 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:35:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:56:51
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6492972..6493855 1419..536 4420 100 Minus
2L 23513712 2L 6493970..6494508 539..1 2695 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:46:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6492972..6493855 1419..536 4420 100 Minus
2L 23513712 2L 6493970..6494508 539..1 2695 100 Minus
Blast to na_te.dros performed on 2019-03-16 05:56:51 has no hits.

GH06693.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:57:33 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 6491957..6492837 537..1417 100 <- Minus
chr2L 6492964..6493499 1..536 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:21:19 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
CG9547-RA 1..1260 71..1330 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:09:21 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
CG9547-RA 1..1260 71..1330 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:43:37 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
CG9547-RA 1..1260 71..1330 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:40:19 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
CG9547-RA 1..1260 71..1330 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:10:16 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
CG9547-RA 1..1260 71..1330 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:00:15 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
CG9547-RA 20..1436 1..1417 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:09:21 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
CG9547-RA 20..1436 1..1417 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:43:37 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
CG9547-RA 25..1441 1..1417 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:40:19 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
CG9547-RA 20..1436 1..1417 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:10:16 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
CG9547-RA 25..1441 1..1417 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:57:33 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6492974..6493854 537..1417 100 <- Minus
2L 6493973..6494508 1..536 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:57:33 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6492974..6493854 537..1417 100 <- Minus
2L 6493973..6494508 1..536 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:57:33 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6492974..6493854 537..1417 100 <- Minus
2L 6493973..6494508 1..536 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:43:37 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6492974..6493854 537..1417 100 <- Minus
arm_2L 6493973..6494508 1..536 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:17:46 Download gff for GH06693.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6492974..6493854 537..1417 100 <- Minus
2L 6493973..6494508 1..536 100   Minus

GH06693.hyp Sequence

Translation from 1 to 1329

> GH06693.hyp
IEQLFRGEPADHFQQKRQNRIGIMIAQSVISKLRPCARRLASTSSKAAAP
KFNWQDPLNLESQLTEEEVAIRDAFRGYCQAELQPRVKMANRLETFDKKI
MEEIGSLGVLGCTIKGYGCAGVSSVAYGLLTREVERVDSAYRSAVSVQSS
LAMGAIYDFGSEEQKQRYLPSMAEGKLIGAFGLTEPNHGSDPAGMETRAK
YDSKSKTYILNGSKTWITSAPIADVIVVWAKCEDGKVRGFLVDRKISGKG
LETPKIEGKFSLRASPTGMILMDEVRVPEEQLLPNVAGFSGPFSCLNNAR
YGIAWGALGAAETCVEIARQYTLDRKQFGRPLAANQLIQKKLADAITEIA
LGLQACLHVGRLKDQKLHTPDMISLLKRNNTGKSLDIARQMRDMLGANGI
SDEYHVIRHVINLESVNTYEGTHDIHALILGRAITGLAAFAN*

GH06693.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:22:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG9547-PA 419 CG9547-PA 1..419 24..442 2141 100 Plus
CG4860-PA 415 CG4860-PA 37..408 64..434 419 29.7 Plus
CG3902-PA 414 CG3902-PA 37..408 64..434 410 29.5 Plus
Arc42-PA 405 CG4703-PA 25..399 62..434 404 29 Plus
CG12262-PA 419 CG12262-PA 10..409 35..432 377 29.5 Plus

GH06693.pep Sequence

Translation from 70 to 1329

> GH06693.pep
MIAQSVISKLRPCARRLASTSSKAAAPKFNWQDPLNLESQLTEEEVAIRD
AFRGYCQAELQPRVKMANRLETFDKKIMEEIGSLGVLGCTIKGYGCAGVS
SVAYGLLTREVERVDSAYRSAVSVQSSLAMGAIYDFGSEEQKQRYLPSMA
EGKLIGAFGLTEPNHGSDPAGMETRAKYDSKSKTYILNGSKTWITSAPIA
DVIVVWAKCEDGKVRGFLVDRKISGKGLETPKIEGKFSLRASPTGMILMD
EVRVPEEQLLPNVAGFSGPFSCLNNARYGIAWGALGAAETCVEIARQYTL
DRKQFGRPLAANQLIQKKLADAITEIALGLQACLHVGRLKDQKLHTPDMI
SLLKRNNTGKSLDIARQMRDMLGANGISDEYHVIRHVINLESVNTYEGTH
DIHALILGRAITGLAAFAN*

GH06693.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:33:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15703-PA 419 GF15703-PA 1..419 1..419 2084 94.5 Plus
Dana\GF10801-PA 415 GF10801-PA 38..409 41..411 431 30.3 Plus
Dana\GF17739-PA 418 GF17739-PA 38..411 39..411 415 30.1 Plus
Dana\GF17623-PA 405 GF17623-PA 25..399 39..411 398 28.2 Plus
Dana\GF10656-PA 420 GF10656-PA 10..409 12..409 385 30.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:33:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23615-PA 419 GG23615-PA 1..419 1..419 2245 100 Plus
Dere\GG13447-PA 414 GG13447-PA 37..408 41..411 421 29.5 Plus
Dere\GG17152-PA 415 GG17152-PA 37..408 41..411 396 29.4 Plus
Dere\Arc42-PA 405 GG23560-PA 25..399 39..411 396 29 Plus
Dere\GG14445-PA 419 GG14445-PA 10..409 12..409 384 30.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:33:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13244-PA 420 GH13244-PA 1..420 1..419 2033 88.8 Plus
Dgri\GH16965-PA 414 GH16965-PA 35..408 39..411 406 29.3 Plus
Dgri\GH16400-PA 406 GH16400-PA 55..400 68..411 393 29.1 Plus
Dgri\GH14704-PA 419 GH14704-PA 10..408 12..409 381 30.2 Plus
Dgri\GH22516-PA 424 GH22516-PA 35..420 34..412 360 27.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG9547-PA 419 CG9547-PA 1..419 1..419 2141 100 Plus
CG4860-PA 415 CG4860-PA 37..408 41..411 419 29.7 Plus
CG3902-PA 414 CG3902-PA 37..408 41..411 410 29.5 Plus
Arc42-PA 405 CG4703-PA 25..399 39..411 404 29 Plus
CG12262-PA 419 CG12262-PA 10..409 12..409 377 29.5 Plus
CG7461-PC 627 CG7461-PC 112..450 84..414 347 29.6 Plus
CG7461-PB 627 CG7461-PB 112..450 84..414 347 29.6 Plus
CG6638-PA 420 CG6638-PA 39..415 41..411 346 26.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:33:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17285-PA 419 GI17285-PA 1..419 1..419 2032 88.6 Plus
Dmoj\GI11829-PA 414 GI11829-PA 37..408 41..411 412 29.5 Plus
Dmoj\GI22432-PA 406 GI22432-PA 65..400 78..411 395 30.6 Plus
Dmoj\GI12250-PA 420 GI12250-PA 10..414 12..415 395 30.5 Plus
Dmoj\GI22465-PA 407 GI22465-PA 29..401 41..411 383 28.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:33:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26099-PA 418 GL26099-PA 1..418 1..419 2086 92.9 Plus
Dper\GL21568-PA 413 GL21568-PA 35..406 41..411 432 31.6 Plus
Dper\GL25250-PA 415 GL25250-PA 38..409 41..411 411 29.2 Plus
Dper\GL25095-PA 419 GL25095-PA 10..409 12..409 390 30.7 Plus
Dper\GL12205-PA 405 GL12205-PA 39..399 53..411 376 28.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:33:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21870-PA 418 GA21870-PA 1..418 1..419 2086 92.9 Plus
Dpse\GA18485-PA 411 GA18485-PA 33..404 41..411 432 31.6 Plus
Dpse\GA17761-PA 415 GA17761-PA 38..409 41..411 411 29.2 Plus
Dpse\GA11516-PA 419 GA11516-PA 10..409 12..409 390 30.7 Plus
Dpse\Arc42-PA 405 GA18369-PA 39..399 53..411 376 28.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:33:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17931-PA 419 GM17931-PA 1..419 1..419 2240 99.8 Plus
Dsec\GM14915-PA 398 GM14915-PA 37..339 41..342 406 32.8 Plus
Dsec\GM26034-PA 420 GM26034-PA 37..413 41..411 396 28.9 Plus
Dsec\GM26869-PA 405 GM26869-PA 2..399 4..411 395 28.3 Plus
Dsec\GM24997-PA 419 GM24997-PA 10..409 12..409 373 29.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22569-PA 419 GD22569-PA 1..419 1..419 2240 99.8 Plus
Dsim\GD20592-PA 415 GD20592-PA 37..408 41..411 409 29.7 Plus
Dsim\GD12323-PA 420 GD12323-PA 37..414 41..411 404 28.8 Plus
Dsim\GD19319-PA 405 GD19319-PA 2..399 4..411 398 28.5 Plus
Dsim\GD14030-PA 439 GD14030-PA 10..414 12..414 375 29.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17894-PA 419 GJ17894-PA 1..419 1..419 2007 88.1 Plus
Dvir\GJ13529-PA 414 GJ13529-PA 35..408 39..411 404 29.1 Plus
Dvir\GJ10063-PA 408 GJ10063-PA 30..402 41..411 388 28.4 Plus
Dvir\GJ10995-PA 406 GJ10995-PA 25..406 39..419 387 29.3 Plus
Dvir\GJ11482-PA 420 GJ11482-PA 10..408 12..409 365 29.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18689-PA 420 GK18689-PA 1..420 1..419 2013 89.1 Plus
Dwil\GK11564-PA 384 GK11564-PA 3..378 39..411 449 31.1 Plus
Dwil\GK20439-PA 417 GK20439-PA 35..411 39..411 398 29.1 Plus
Dwil\Arc42-PA 405 GK22361-PA 25..399 39..411 394 28.2 Plus
Dwil\GK23895-PA 420 GK23895-PA 10..408 12..409 390 30.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18434-PA 419 GE18434-PA 1..419 1..419 2239 99.5 Plus
Dyak\GE22549-PA 414 GE22549-PA 37..408 41..411 420 29.5 Plus
Dyak\GE22545-PA 414 GE22545-PA 37..408 41..411 420 29.5 Plus
Dyak\GE24541-PA 415 GE24541-PA 37..408 41..411 412 30 Plus
Dyak\GE25631-PA 405 GE25631-PA 25..399 39..411 391 28.9 Plus