BDGP Sequence Production Resources |
Search the DGRC for GH06695
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 66 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | Ns3-RA |
Protein status: | GH06695.pep: gold |
Preliminary Size: | 1903 |
Sequenced Size: | 2027 |
Gene | Date | Evidence |
---|---|---|
CG14788 | 2001-01-01 | Release 2 assignment |
CG14788 | 2001-07-04 | Blastp of sequenced clone |
CG14788 | 2003-01-01 | Sim4 clustering to Release 3 |
l(1)G0431 | 2008-04-29 | Release 5.5 accounting |
l(1)G0431 | 2008-08-15 | Release 5.9 accounting |
l(1)G0431 | 2008-12-18 | 5.12 accounting |
2027 bp (2027 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047556
> GH06695.complete GCAAACATTGCACGTGTTTTTGACAATCAAAATAATTATTTCTTCTGTGG ATTTGCGAATATAGTGACTGCGCCATGGGCAAAAAGAACAAGGGCGGCGC CCCCAACCTGGGCCGCCAGTTGATCAAGGATCGTTTCGGACACACTCAGC GCCGCAAGGTGGACAACGACACGATGCTGCACACCACCGAGCTGCAGGAT GGCTACGACTGGGGCCGCCTCAACCTGTCCTCTGTCACTGAGGAGTCGTC GTTCCAGGCCTTCCTGCGCACGGCTGAGCTGGCCGGCACTGAGTTCCAGG CCGAGAAGCTGAACATCACGTTCGTGAACCCCAAGCAGCGCGTTGGACTG CTGAGCAAGACGCAGGAGCAGCGCATGCACCAGAAGCACGACGAGCACCG TGACCAGCTCAAGATCCCGCGGCGGCCCAAGTGGACCAAGGAGACGAGCG CCGAGGAGCTAGTGCGAGCCGAGAACGAGGCATTTCTCGACTGGCGCCGC GACCTGGCGCTGCTGCAGGAGGACGAGGAGATCTTGATGACTCCGTATGA GAAGAACCTGGAGTTCTGGCGGCAGCTGTGGCGCGTAGTGGAGCGATCTG ACGTCGTTGTGCAGATCGTAGACGCCCGTAATCCGCTGCTGTTCCGCAGC GCCGACCTTGAGCGCTACGTAAAGGAGGTGGAACCTAGCAAGATGAACAT GATCCTGGTAAACAAGTCGGACCTGCTCACTGAGGAACAGCGTCGCCACT GGGCGGAGTACTTTGACAGCGAGGGTATTCGCACGGCCTTCTACTCGGCC ACGCTGGTAGAGGAGGAGTTGAAGCGGGAGGCGGAGGAGTGCCTGGATTC CTTTCCCGAGGTGCAACAGCTGCGCAGAGCAGTTGAGGAGATAAAACAGT CGTTGGATAGCGTGGAGGACGCTTTGAACGTTATCGAGCAGAAATATAAG ACGATTCCCGAGACTCAAAACGATGAGCTGCCACGATTGCCCGGGGACAA GAACAGTCCCCGACTGCTGTCCCGCCTGGAGCTCATTGAGTTCCTGCGAA ACATCTACACCGGTCCCCGGCACACAGAGCAGCACGTGACCGTCGGAATG GTCGGCTACCCAAACGTTGGCAAAAGTAGCACCATCAACTCGCTGATGAC AGTGAAGAAGGTGTCCGTTTCGGCCACGCCGGGCAAAACTAAACGCTTCC AGACGCTTTTCCTGGACAAGGACATACTGCTCTGCGACTGTCCCGGTCTG GTGATGCCGAGTTTTGTGTTAACCAAGGCGGACATGTTGCTCAACGGCAT CCTGCCCATTGACCAAATGCGCGATCACGTTCCCGCCGTCAACTTGCTGT GCGAGCGCATTCCGCGCCACGTCCTTGAAGACAAATACGGTATTGTGATA GCCAAGCCGCTGGAAGGCGAGGACATGGAAAGGCCACCGCATTCGGAGGA GCTGCTGCTGGCTTATGGATACAATCGCGGTTTTATGACCTCCAACGGGC AGCCGGATCAGGCGCGTTCCGCCAGGTATGTGCTTAAAGACTACGTCAAT GGCAGACTGCTCTACGCCATGAGCCCGCCCTCTGTACCGCAGACCGAGTA TCACACCTTTCCCGAACGCCAGCGCAGGGTCATCGAGGAATCACAGCTGC CCGGCCAACAGCAGCGAGCCATGCGGATCAACAAAAGCACGTCCAAGGAG CTAGACAACCAATTCTTCTCCGACAAGCCTACGCACGCCCACGTCAAAGG ACGCACTAACTTCCCTAACGTGCGCCTGGCCAACGACGGGTCCCTAGTAG CCGGCAATGATCCGGCGGCCAAGCCCTGGCGTCATGTGAAGAAGGAGAGG CGCGAGAAGCTGCGCAAAAAGTTCTCGCACCTGGACGAGCACTGATTGTA GCCCATTAGTTATTTATTCCGAAGGGTGTGTCTAAGAGGCACTTGTACAT TTTAAGCATTAAACCTACGTATATACATATATATTAAAGTCCCCCCGACT TCGAGAGTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1356585..1357879 | 1470..176 | 6445 | 99.8 | Minus |
chrX | 22417052 | chrX | 1355919..1356252 | 2009..1676 | 1655 | 99.7 | Minus |
chrX | 22417052 | chrX | 1356312..1356517 | 1676..1471 | 985 | 98.5 | Minus |
chrX | 22417052 | chrX | 1357953..1358128 | 176..1 | 880 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 1462646..1463940 | 1470..176 | 6475 | 100 | Minus |
X | 23542271 | X | 1461980..1462313 | 2009..1676 | 1670 | 100 | Minus |
X | 23542271 | X | 1462373..1462578 | 1676..1471 | 1030 | 100 | Minus |
X | 23542271 | X | 1464014..1464189 | 176..1 | 880 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 1470744..1472038 | 1470..176 | 6475 | 100 | Minus |
X | 23527363 | X | 1470078..1470411 | 2009..1676 | 1670 | 100 | Minus |
X | 23527363 | X | 1470471..1470676 | 1676..1471 | 1030 | 100 | Minus |
X | 23527363 | X | 1472112..1472287 | 176..1 | 880 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1355919..1356251 | 1677..2009 | 99 | <- | Minus |
chrX | 1356312..1356517 | 1471..1676 | 98 | <- | Minus |
chrX | 1356585..1357878 | 177..1470 | 99 | <- | Minus |
chrX | 1357953..1358128 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0431-RA | 1..1821 | 75..1895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ns3-RA | 1..1821 | 75..1895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ns3-RA | 1..1821 | 75..1895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0431-RA | 1..1821 | 75..1895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ns3-RA | 1..1821 | 75..1895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0431-RA | 24..2032 | 1..2009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ns3-RA | 24..2032 | 1..2009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ns3-RA | 32..2040 | 1..2009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0431-RA | 24..2032 | 1..2009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ns3-RA | 32..2040 | 1..2009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1461980..1462312 | 1677..2009 | 100 | <- | Minus |
X | 1462373..1462578 | 1471..1676 | 100 | <- | Minus |
X | 1462646..1463939 | 177..1470 | 100 | <- | Minus |
X | 1464014..1464189 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1461980..1462312 | 1677..2009 | 100 | <- | Minus |
X | 1462373..1462578 | 1471..1676 | 100 | <- | Minus |
X | 1462646..1463939 | 177..1470 | 100 | <- | Minus |
X | 1464014..1464189 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1461980..1462312 | 1677..2009 | 100 | <- | Minus |
X | 1462373..1462578 | 1471..1676 | 100 | <- | Minus |
X | 1462646..1463939 | 177..1470 | 100 | <- | Minus |
X | 1464014..1464189 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1356013..1356345 | 1677..2009 | 100 | <- | Minus |
arm_X | 1356406..1356611 | 1471..1676 | 100 | <- | Minus |
arm_X | 1356679..1357972 | 177..1470 | 100 | <- | Minus |
arm_X | 1358047..1358222 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1470471..1470676 | 1471..1676 | 100 | <- | Minus |
X | 1470078..1470410 | 1677..2009 | 100 | <- | Minus |
X | 1470744..1472037 | 177..1470 | 100 | <- | Minus |
X | 1472112..1472287 | 1..176 | 100 | Minus |
Translation from 74 to 1894
> GH06695.pep MGKKNKGGAPNLGRQLIKDRFGHTQRRKVDNDTMLHTTELQDGYDWGRLN LSSVTEESSFQAFLRTAELAGTEFQAEKLNITFVNPKQRVGLLSKTQEQR MHQKHDEHRDQLKIPRRPKWTKETSAEELVRAENEAFLDWRRDLALLQED EEILMTPYEKNLEFWRQLWRVVERSDVVVQIVDARNPLLFRSADLERYVK EVEPSKMNMILVNKSDLLTEEQRRHWAEYFDSEGIRTAFYSATLVEEELK REAEECLDSFPEVQQLRRAVEEIKQSLDSVEDALNVIEQKYKTIPETQND ELPRLPGDKNSPRLLSRLELIEFLRNIYTGPRHTEQHVTVGMVGYPNVGK SSTINSLMTVKKVSVSATPGKTKRFQTLFLDKDILLCDCPGLVMPSFVLT KADMLLNGILPIDQMRDHVPAVNLLCERIPRHVLEDKYGIVIAKPLEGED MERPPHSEELLLAYGYNRGFMTSNGQPDQARSARYVLKDYVNGRLLYAMS PPSVPQTEYHTFPERQRRVIEESQLPGQQQRAMRINKSTSKELDNQFFSD KPTHAHVKGRTNFPNVRLANDGSLVAGNDPAAKPWRHVKKERREKLRKKF SHLDEH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21278-PA | 605 | GF21278-PA | 1..605 | 1..606 | 2831 | 87.8 | Plus |
Dana\GF15352-PA | 575 | GF15352-PA | 112..480 | 114..494 | 376 | 32 | Plus |
Dana\GF17911-PA | 581 | GF17911-PA | 138..425 | 163..508 | 302 | 27.5 | Plus |
Dana\GF13248-PA | 676 | GF13248-PA | 299..476 | 320..508 | 218 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12698-PA | 607 | GG12698-PA | 1..607 | 1..606 | 3082 | 96 | Plus |
Dere\GG21249-PA | 575 | GG21249-PA | 104..498 | 106..510 | 380 | 31.7 | Plus |
Dere\GG16794-PA | 581 | GG16794-PA | 139..424 | 163..506 | 300 | 27.6 | Plus |
Dere\GG21043-PA | 674 | GG21043-PA | 299..476 | 320..508 | 224 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11875-PA | 611 | GH11875-PA | 1..611 | 1..606 | 2760 | 85.3 | Plus |
Dgri\GH10880-PA | 570 | GH10880-PA | 116..489 | 114..502 | 379 | 31.3 | Plus |
Dgri\GH18066-PA | 581 | GH18066-PA | 139..504 | 163..560 | 292 | 25.4 | Plus |
Dgri\GH20960-PA | 682 | GH20960-PA | 299..467 | 320..501 | 226 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ns3-PB | 606 | CG14788-PB | 1..606 | 1..606 | 3156 | 100 | Plus |
Ns3-PA | 606 | CG14788-PA | 1..606 | 1..606 | 3156 | 100 | Plus |
Ns4-PA | 575 | CG9320-PA | 113..498 | 115..510 | 392 | 32.4 | Plus |
Ns1-PA | 581 | CG3983-PA | 139..424 | 163..506 | 291 | 26.7 | Plus |
Ns2-PA | 674 | CG6501-PA | 299..476 | 320..508 | 212 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15663-PA | 613 | GI15663-PA | 1..613 | 1..606 | 2757 | 85.5 | Plus |
Dmoj\GI18253-PA | 574 | GI18253-PA | 113..492 | 114..502 | 415 | 31.8 | Plus |
Dmoj\GI23744-PA | 583 | GI23744-PA | 141..428 | 163..504 | 268 | 26.1 | Plus |
Dmoj\GI21297-PA | 678 | GI21297-PA | 299..483 | 320..515 | 242 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14378-PA | 602 | GL14378-PA | 1..602 | 1..606 | 2828 | 87 | Plus |
Dper\GL18517-PA | 577 | GL18517-PA | 112..491 | 114..503 | 382 | 31.9 | Plus |
Dper\GL21923-PA | 583 | GL21923-PA | 139..427 | 163..507 | 304 | 27.4 | Plus |
Dper\GL10621-PA | 676 | GL10621-PA | 299..484 | 320..523 | 234 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13246-PA | 602 | GA13246-PA | 1..602 | 1..606 | 2832 | 87.1 | Plus |
Dpse\GA21698-PA | 577 | GA21698-PA | 112..491 | 114..503 | 382 | 31.9 | Plus |
Dpse\GA26447-PA | 583 | GA26447-PA | 139..427 | 163..507 | 303 | 27.4 | Plus |
Dpse\GA19643-PA | 676 | GA19643-PA | 299..484 | 320..523 | 234 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18974-PA | 607 | GM18974-PA | 1..607 | 1..606 | 3208 | 98.8 | Plus |
Dsec\GM23366-PA | 575 | GM23366-PA | 104..498 | 106..510 | 389 | 31.9 | Plus |
Dsec\GM15388-PA | 581 | GM15388-PA | 139..424 | 163..506 | 303 | 27.9 | Plus |
Dsec\GM19971-PA | 674 | GM19971-PA | 299..479 | 320..511 | 225 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24278-PA | 575 | GD24278-PA | 104..498 | 106..510 | 385 | 31.9 | Plus |
Dsim\sta-PA | 133 | GD16420-PA | 68..133 | 543..606 | 332 | 93.9 | Plus |
Dsim\GD25465-PA | 674 | GD25465-PA | 299..476 | 320..508 | 225 | 31.2 | Plus |
Dsim\GD20254-PA | 328 | GD20254-PA | 5..169 | 328..504 | 202 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19196-PA | 611 | GJ19196-PA | 1..611 | 1..606 | 2737 | 85.5 | Plus |
Dvir\GJ17511-PA | 576 | GJ17511-PA | 114..496 | 114..503 | 371 | 30.6 | Plus |
Dvir\GJ20899-PA | 682 | GJ20899-PA | 299..467 | 320..501 | 229 | 31.7 | Plus |
Dvir\GJ10591-PA | 581 | GJ10591-PA | 251..426 | 320..504 | 212 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10107-PA | 610 | GK10107-PA | 1..610 | 1..606 | 2813 | 85.8 | Plus |
Dwil\GK14912-PA | 576 | GK14912-PA | 111..492 | 112..503 | 371 | 31.1 | Plus |
Dwil\GK13906-PA | 579 | GK13906-PA | 132..429 | 156..506 | 302 | 27.3 | Plus |
Dwil\GK21401-PA | 681 | GK21401-PA | 299..476 | 320..510 | 228 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16528-PA | 572 | GE16528-PA | 1..572 | 1..606 | 2817 | 88.5 | Plus |
Dyak\GE12344-PA | 575 | GE12344-PA | 104..491 | 106..503 | 379 | 31.7 | Plus |
Dyak\GE26110-PA | 581 | GE26110-PA | 139..424 | 163..506 | 304 | 27.9 | Plus |
Dyak\GE13986-PA | 674 | GE13986-PA | 299..476 | 320..508 | 224 | 31.2 | Plus |
Translation from 74 to 1894
> GH06695.hyp MGKKNKGGAPNLGRQLIKDRFGHTQRRKVDNDTMLHTTELQDGYDWGRLN LSSVTEESSFQAFLRTAELAGTEFQAEKLNITFVNPKQRVGLLSKTQEQR MHQKHDEHRDQLKIPRRPKWTKETSAEELVRAENEAFLDWRRDLALLQED EEILMTPYEKNLEFWRQLWRVVERSDVVVQIVDARNPLLFRSADLERYVK EVEPSKMNMILVNKSDLLTEEQRRHWAEYFDSEGIRTAFYSATLVEEELK REAEECLDSFPEVQQLRRAVEEIKQSLDSVEDALNVIEQKYKTIPETQND ELPRLPGDKNSPRLLSRLELIEFLRNIYTGPRHTEQHVTVGMVGYPNVGK SSTINSLMTVKKVSVSATPGKTKRFQTLFLDKDILLCDCPGLVMPSFVLT KADMLLNGILPIDQMRDHVPAVNLLCERIPRHVLEDKYGIVIAKPLEGED MERPPHSEELLLAYGYNRGFMTSNGQPDQARSARYVLKDYVNGRLLYAMS PPSVPQTEYHTFPERQRRVIEESQLPGQQQRAMRINKSTSKELDNQFFSD KPTHAHVKGRTNFPNVRLANDGSLVAGNDPAAKPWRHVKKERREKLRKKF SHLDEH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ns3-PB | 606 | CG14788-PB | 1..606 | 1..606 | 3156 | 100 | Plus |
Ns3-PA | 606 | CG14788-PA | 1..606 | 1..606 | 3156 | 100 | Plus |
Ns4-PA | 575 | CG9320-PA | 113..498 | 115..510 | 392 | 32.4 | Plus |
Ns1-PA | 581 | CG3983-PA | 139..424 | 163..506 | 291 | 26.7 | Plus |
Ns2-PA | 674 | CG6501-PA | 299..476 | 320..508 | 212 | 31.2 | Plus |