BDGP Sequence Production Resources |
Search the DGRC for GH06740
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 67 |
Well: | 40 |
Vector: | pOT2 |
Associated Gene/Transcript | Lrr47-RA |
Protein status: | GH06740.pep: gold |
Preliminary Size: | 1656 |
Sequenced Size: | 1593 |
Gene | Date | Evidence |
---|---|---|
CG6098 | 2001-01-01 | Release 2 assignment |
CG6098 | 2001-09-19 | Blastp of sequenced clone |
CG6098 | 2003-01-01 | Sim4 clustering to Release 3 |
Lrr47 | 2008-04-29 | Release 5.5 accounting |
Lrr47 | 2008-08-15 | Release 5.9 accounting |
Lrr47 | 2008-12-18 | 5.12 accounting |
1593 bp (1593 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058306
> GH06740.complete CCAAAACAAATGTTTAGTTTTATTTAGCGGGTTTTTTTTTTGTTTATTGT CTAATCACTGCCTCGCCATGAAGATTTTGTGCGAAGTTCAGGTGGTGAAT CGCGCCACCCAGACGAACAAAACGCCACGTCCCGTGAAATCCACACTGGC CATTGGCTACAAGCAAAGCGCCAGGGATGCGAATGGAAACACCAAGAAGG AGCTGGAAATGGTGCTCTTTAGTGGACAAAACAAGACTGGAAATCGCTAC AAGGTCAAGGATAACATTCATGTCGTGCACACCAAGTTTGTGCTGGATGG GAAGACCACCATTGGTTTCATACAGCCGCCAGATAACCTGCTTATTAAGT GCGATCCTATCCAGCTGAAAGGATTCCTGCAGACCCTCAAGCTGGGCATG GATGGCAAGGACGCCATCAATTTGAGACTGAACATAAACGCCGCTACGGC AATTCCGCAGAAGGCACAGCCCCAGGTGCGCATGGTAATCAGCAAGCGGA GCGAGTATCCCATCAAGGGATTTCCGCGCACCCTCAAATCGCTGACCATC AACAACAGCCAGCTAGTGAAGCTGAGCTTCGAGATATGCACCCTGCGCAA CCTCACAAAGCTGGATGTCAGCGGTAACAAGCTGACCAAGATTCCCTCGG AGCTGGGTCGTCTTCCGCTCACCTCGCTGCACCTGGGCAACAACTTACTG GGTACTCAGAATGACTGGTGCTGGCTGCGGGGCACTAAGCTCTGTCAGTC GCTCGGCGAGCTGGATCTGTCGGGCAACGGGCTGACTTACTTTCCACCTC CGCTGGTTAAATTCGAGTCGCTTGTATCGCTGAATCTCAACAACAATCTG CTGAGTCGGCTGCCCTTTGCCATTCGCCGGATGAAAGCACTGCGTAAACT TTATGTGTGCAGCAACGAACTAGAGTCCCTGCCCTCTGCTGTCGAGGATC TACGGATCGACCTGTTGGATGTGTGGGGCAATTGCTTCAAGGAATTCAAT GCAGATGCCGCGCAGCAAATGTATCTGCAAAAGGCGGCATCTAATTCGCC GCAACCTTTGTGGCTTTTGGGAGCTCGAGCTGTGGATAAGTATATGCTGC CCTTGTCCGCGGGCTCTATTCCCGCTGTGCTAATAGATCTGATAAGGGAG GCTCCCAGATGCCCGTGCGGCGAGCTCTGCTATGCCCAGCGCAAGGAGGA CCTCTTCCAGCGCGTTGTTCAGCCGAAATTCATCACCGTTAAGAACCTCA CATACAGTCGTGAGCATCAGATCTACGCGGATGTGGTCCTCTGTGACTCT AGGTGCAGTGCATCTGCTGAACTGAAGTTGCTCTTCAATATAATCTTTTC CTGATTGAATCAGATGGTGTACATTTTTAGCTATTAGTCAAAGATTTCTT TAAATTATTTCACTAAACCACATCATTGATCCAAAATTAATTGGCGCGGA GCACTTATTTAAGTATACGTATTTTTATATACTTAATCATTAATCATTGC TCGGTTATGTTTTCATTCACCGTATTTGTTATACTTGTACTGCCAATAAA TGCGAATTAACGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10516174..10516813 | 1..640 | 100 | -> | Plus |
chr2L | 10516875..10517799 | 641..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lrr47-RA | 1..1287 | 68..1354 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lrr47-RA | 1..1287 | 68..1354 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lrr47-RA | 1..1287 | 68..1354 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lrr47-RA | 1..1287 | 68..1354 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lrr47-RA | 1..1287 | 68..1354 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lrr47-RA | 23..1587 | 1..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lrr47-RA | 23..1587 | 1..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lrr47-RA | 25..1589 | 1..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lrr47-RA | 23..1587 | 1..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lrr47-RA | 25..1589 | 1..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10517359..10517998 | 1..640 | 100 | -> | Plus |
2L | 10518060..10518984 | 641..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10517359..10517998 | 1..640 | 100 | -> | Plus |
2L | 10518060..10518984 | 641..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10517359..10517998 | 1..640 | 100 | -> | Plus |
2L | 10518060..10518984 | 641..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10517359..10517998 | 1..640 | 100 | -> | Plus |
arm_2L | 10518060..10518984 | 641..1565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10517359..10517998 | 1..640 | 100 | -> | Plus |
2L | 10518060..10518984 | 641..1565 | 100 | Plus |
Translation from 1 to 1353
> GH06740.hyp QNKCLVLFSGFFFCLLSNHCLAMKILCEVQVVNRATQTNKTPRPVKSTLA IGYKQSARDANGNTKKELEMVLFSGQNKTGNRYKVKDNIHVVHTKFVLDG KTTIGFIQPPDNLLIKCDPIQLKGFLQTLKLGMDGKDAINLRLNINAATA IPQKAQPQVRMVISKRSEYPIKGFPRTLKSLTINNSQLVKLSFEICTLRN LTKLDVSGNKLTKIPSELGRLPLTSLHLGNNLLGTQNDWCWLRGTKLCQS LGELDLSGNGLTYFPPPLVKFESLVSLNLNNNLLSRLPFAIRRMKALRKL YVCSNELESLPSAVEDLRIDLLDVWGNCFKEFNADAAQQMYLQKAASNSP QPLWLLGARAVDKYMLPLSAGSIPAVLIDLIREAPRCPCGELCYAQRKED LFQRVVQPKFITVKNLTYSREHQIYADVVLCDSRCSASAELKLLFNIIFS *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lrr47-PB | 428 | CG6098-PB | 1..428 | 23..450 | 2209 | 100 | Plus |
Lrr47-PA | 428 | CG6098-PA | 1..428 | 23..450 | 2209 | 100 | Plus |
CG32687-PB | 377 | CG32687-PB | 23..224 | 142..318 | 164 | 27.2 | Plus |
CG32687-PA | 377 | CG32687-PA | 23..224 | 142..318 | 164 | 27.2 | Plus |
scrib-PC | 1247 | CG43398-PC | 192..329 | 170..311 | 162 | 37.1 | Plus |
Translation from 67 to 1353
> GH06740.pep MKILCEVQVVNRATQTNKTPRPVKSTLAIGYKQSARDANGNTKKELEMVL FSGQNKTGNRYKVKDNIHVVHTKFVLDGKTTIGFIQPPDNLLIKCDPIQL KGFLQTLKLGMDGKDAINLRLNINAATAIPQKAQPQVRMVISKRSEYPIK GFPRTLKSLTINNSQLVKLSFEICTLRNLTKLDVSGNKLTKIPSELGRLP LTSLHLGNNLLGTQNDWCWLRGTKLCQSLGELDLSGNGLTYFPPPLVKFE SLVSLNLNNNLLSRLPFAIRRMKALRKLYVCSNELESLPSAVEDLRIDLL DVWGNCFKEFNADAAQQMYLQKAASNSPQPLWLLGARAVDKYMLPLSAGS IPAVLIDLIREAPRCPCGELCYAQRKEDLFQRVVQPKFITVKNLTYSREH QIYADVVLCDSRCSASAELKLLFNIIFS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15800-PA | 428 | GF15800-PA | 1..427 | 1..427 | 1768 | 80.1 | Plus |
Dana\GF16442-PA | 1847 | GF16442-PA | 192..369 | 148..305 | 161 | 33.1 | Plus |
Dana\GF19554-PA | 375 | GF19554-PA | 38..220 | 148..296 | 157 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23649-PA | 428 | GG23649-PA | 1..428 | 1..428 | 2034 | 91.4 | Plus |
Dere\GG18917-PA | 371 | GG18917-PA | 49..218 | 156..296 | 157 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10410-PA | 431 | GH10410-PA | 1..430 | 1..427 | 1624 | 71.4 | Plus |
Dgri\GH12711-PA | 368 | GH12711-PA | 23..216 | 120..296 | 163 | 27.5 | Plus |
Dgri\GH18723-PA | 1864 | GH18723-PA | 192..369 | 148..305 | 162 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lrr47-PB | 428 | CG6098-PB | 1..428 | 1..428 | 2209 | 100 | Plus |
Lrr47-PA | 428 | CG6098-PA | 1..428 | 1..428 | 2209 | 100 | Plus |
CG32687-PB | 377 | CG32687-PB | 23..224 | 120..296 | 164 | 27.2 | Plus |
CG32687-PA | 377 | CG32687-PA | 23..224 | 120..296 | 164 | 27.2 | Plus |
scrib-PC | 1247 | CG43398-PC | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PI | 1711 | CG43398-PI | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PP | 1729 | CG43398-PP | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PB | 1756 | CG43398-PB | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PA | 1756 | CG43398-PA | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PU | 1766 | CG43398-PU | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PD | 1851 | CG43398-PD | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PH | 1939 | CG43398-PH | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PR | 1951 | CG43398-PR | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PK | 2331 | CG43398-PK | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PJ | 2426 | CG43398-PJ | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PT | 2444 | CG43398-PT | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PM | 2490 | CG43398-PM | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PO | 2515 | CG43398-PO | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PN | 2554 | CG43398-PN | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PQ | 2577 | CG43398-PQ | 192..329 | 148..289 | 162 | 37.1 | Plus |
scrib-PL | 2585 | CG43398-PL | 192..329 | 148..289 | 162 | 37.1 | Plus |
Lap1-PB | 849 | CG10255-PB | 25..192 | 145..309 | 161 | 33.5 | Plus |
Lap1-PA | 849 | CG10255-PA | 25..192 | 145..309 | 161 | 33.5 | Plus |
Lrch-PA | 809 | CG6860-PA | 134..278 | 149..292 | 160 | 37.5 | Plus |
Lrch-PC | 1079 | CG6860-PC | 134..278 | 149..292 | 160 | 37.5 | Plus |
Lrch-PB | 1135 | CG6860-PB | 134..278 | 149..292 | 160 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23304-PA | 428 | GI23304-PA | 1..427 | 1..427 | 1576 | 71.2 | Plus |
Dmoj\GI22874-PA | 1865 | GI22874-PA | 192..369 | 148..305 | 155 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26611-PA | 428 | GL26611-PA | 1..427 | 1..427 | 1799 | 78.2 | Plus |
Dper\GL14883-PA | 372 | GL14883-PA | 49..217 | 156..296 | 162 | 30.1 | Plus |
Dper\GL23097-PA | 1247 | GL23097-PA | 238..415 | 148..305 | 155 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19351-PA | 428 | GA19351-PA | 1..427 | 1..427 | 1802 | 78.5 | Plus |
Dpse\GA17074-PA | 372 | GA17074-PA | 49..217 | 156..296 | 161 | 30.1 | Plus |
Dpse\GA18897-PA | 1889 | GA18897-PA | 192..369 | 148..305 | 155 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18513-PA | 428 | GM18513-PA | 1..428 | 1..428 | 2042 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23713-PA | 428 | GD23713-PA | 1..428 | 1..428 | 2073 | 94.6 | Plus |
Dsim\GD16031-PA | 375 | GD16031-PA | 49..222 | 156..296 | 150 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23812-PA | 428 | GJ23812-PA | 1..428 | 1..428 | 1720 | 74.3 | Plus |
Dvir\GJ14718-PA | 373 | GJ14718-PA | 38..221 | 148..296 | 159 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14600-PA | 376 | GK14600-PA | 1..367 | 1..365 | 1249 | 67.8 | Plus |
Dwil\GK14599-PA | 428 | GK14599-PA | 1..428 | 1..428 | 1207 | 58.3 | Plus |
Dwil\GK18321-PA | 293 | GK18321-PA | 1..293 | 1..331 | 933 | 58.8 | Plus |
Dwil\GK21072-PA | 237 | GK21072-PA | 1..236 | 1..236 | 892 | 73.7 | Plus |
Dwil\GK12700-PA | 195 | GK12700-PA | 1..192 | 1..192 | 787 | 77.6 | Plus |