BDGP Sequence Production Resources |
Search the DGRC for GH06755
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 67 |
Well: | 55 |
Vector: | pOT2 |
Associated Gene/Transcript | CG33472-RA |
Protein status: | GH06755.pep: validated full length |
Preliminary Size: | 4600 |
Sequenced Size: | 4981 |
Gene | Date | Evidence |
---|---|---|
CG33472 | 2002-01-03 | Blastp of sequenced clone |
CG30032 | 2003-01-01 | Sim4 clustering to Release 3 |
CG33472 | 2008-04-29 | Release 5.5 accounting |
CG33472 | 2008-08-15 | Release 5.9 accounting |
CG33472 | 2008-12-18 | 5.12 accounting |
4981 bp (4981 high quality bases) assembled on 2002-01-03
GenBank Submission: AY089495
> GH06755.complete TCGTTGGCCATGTAGTTGCGTGTGACCTGCTAAATAAATTACAAAATTAA CAAATAAAAAACGTCTATCGACACTAATTGGCCACAACTTACTGTTCAAC AATTGATAAATTATTCGAATTAGTGAATTAAACAATTGGCAAGTGTGCAC AGTTAAGTGAAAGGCCAGATGAAAATCAAGGCAAAGCGATGCACTAAAGT GTTGTGGGCCAAATCAATAGAAAAGCAGTGAAGGAGAAAAGTCACCAATC GACGGAAAAGCGACCGAGACCACGGCGAGGGTCGAATGCAAATTGCAGTA GACCTCGTTAAGGCTAAGAACACAAGTTGGCCGAGTTAAGCTGGCCAATC GATTCCGAGAATCGGGACCATCTTATGAAACAACGGCCCAACCGCCGACC CGGAAAAGTGTGAAACGAAAGGAAAGGAAAAGTGAAAAGTGCTGGGAAAA GTGGAGAGGCTGCAGCGTCGTGTAAACACAGAGTCGCACAAAATCAATAC TCGCGTGTGTCTGGGCCAACGAAAACCAGGCAGTCAAACATGAACGAGGA CTCCAATTCGGTTGGCCAGTAGTAACTGGGACTAAAGTGACGGCATTATA ATGCTTCGCTACAGGAAGTGATTGCAAATTGCGGACAGCACATAGTATAA ACTTAGATTTTTTGGCCCACTCCAAGTGGGTGGCAAGGCGGAAAAGCGGC AAGATGTGGACGCAGAGAAATGCAGTTGGCAATTGGCTGTTGGTATTAAC AGCCGTTATCGGATTTCTAACTTTCATATGGATTCCGCAGACCTCAGCCG AATGTCAAACGCGATCGATTTACTGCTATGAGTGCGACTCCTGGACTGAT GCCCGCTGCAAGGATCCTTTCAACTATACAGCCCTGCCAAGGTGGTGCGA CGCATGTGTACGTCACAGTTACAGATCAATTTATTCATGGTCGATCACGT GTGCATGGTGGAAGGTTCAGGCAGTGGACGTATGTGCTTTTGTGAGGAAG ATATGTGCAATTCTAGTAAAAATTTACACACTAATGGTTGCCAGCTGCAT CTCATACCCATCGCAGTGGCAGTATCTTGGCTAATGGGTCAATTGCTCAG CAGATAGAAAGTGTTAGGCTCACCCACAGAAATCCACATACTCAGAACAT ACAGAACATACAACACAGCCAGAGAATACCCTACACACTCACTATCTCTC TTCCTCTCTATCTAAGCATATGATTTGTAGATTGATTTGATTTCATTACG ATAACAGTTACGATTGATTTGTTTTGGAGCACAGTCTGCAAAGGTCGGAC TTCGAGTAGCTTCGATCAGCACTAAGCGAAGACTCGAAAACCCAATCTAC GGAATGTGAATGCATACCAAAGCTTCCAAAGACAGAAGGCTTTCTCTATT TCTCTATCACACACAGTAAACACACCCTAAGCGAGCTTGGGATGCACAGA GTTCTTGAGATGCGAGTTTAATCGAATCGCATTGAAGTCGAATCCGAATC GAATCACAGTACTCGTATTCGGTATTTGAATTGCATGTTGTTGATGCTAA AGCTGAAGCATGTAGCGCTTAAGTAGGAATCGTAGTGGTTATTACATTTT GATTTCGTTGTTACTTACATTTGTAAATGCCCCGACCAGAGGGATAAACC AAAAACCAACGTCAGTAATCGATTCAAACTTTAATTCGTTTATAGACTTA CTTTGAACATTTGTCTAAATCATATGTAAACTTGGAATAACTCGACCCCA GACACATTGTGTATATAGCCAGACCCAAAAACATCAAAGATCATCCCAAA AGTATTGCAGTTACCAAGTGGAACATTTGCTCATCTTGTTTATTCCAAAG TCGGAGGAAAACTCCATAATGCATAAACGTTACTTTGTTGTTAATACTCT GTATCCTAGATCTTAGCCATTAAGCTGTACTCTCGGTTCTCGCTTGGACC CCAAAACTAACTAAAATCCCACGCATCATATCACGTACCGAAGCAACAAT GAGACCGAACTTTGGTGACCTATCGATCTTAGAGTAGAACCTGCCACCAG CACCTAACTGTATAAAGTACCAATCACCCTGGTCCCTTTGGTTTATGTTA ACAAGTGATAATTAGATTGTAAGTAGAAGACCCAGTTCCCAATTCCGATC CCGAGCCCTAGATCCGTAAAGAACCCGTATCCCTCATTATGAAATTGAAA TTGAATCAATTCTCATTCATGCTAGTGATAGTTTTAAAACGAATCGAATC GGAATTATAGCTTATATAGTTTATTATTTAAATTTTTGGAATTTGACTTA ATATTATGAATGAATAGTTATGATTATCATCTCGACTAGAGTATTCGACT TAAAGTTTTGTATTCTAAGCGTAAACCTTTTCATTTGTATAATTGAAGAT TGGCTAATAAACAACCATTTTTACCATACGTACATTTCTAGCAAAATTTA CTCTCAACCGTTGCTGTTACTTTTTAGCTTAAATTTGCTTTATCTACTTG CTACTCACTTAACCAACTTTTCAACAATCGTGCACTTTTGCCCACGCATT TGTACAAAACTTAACCTAGACTTGGCTTTAGTTTAAAAATGCTTACAAAA ACTAACTAAAGAAATCAATAGAAAATCCGTATCCGTCCAACAGGGAAGCA TGAGAACTAATTTCGTTGCTTGGGCACAGGTAAGTCACAAGCCAAGAAAA AAAATATACAAAAATTACAAAAGTCAAGTACAGTTGCGCACCGTTTTCTT AGTTCGATCTTGCCTCGCTCGTAGATGGATGGGATACCGGATTTTAGCCG GCCTATCTTGGTGGTTCACAAACACACTTTCACTCCTTCCCCGATCCAGC ACCCTCCTGCCTCCCTCCCGCTCCAGAAAAAATCCCAAAACACTTAGCGA AATTCCCTATGCAATGTTAACACCAAACGTTTTTCGTTTTATTTGTATTA TTTCTTGATTTCCTGGTATGTTGGTTTGTTCGATTACAAATAAACATATA TATTTTAATCACAAATATCTTAACGATTTTGGTTTGTGAATGTTGACAAT ATTCTTATAACCAGTATTTGATTGATTGATTGACGGTTAATGCGTTCGAA AGTTTAAACAAAAACATAAATCGAAAAAGGCAATGAACTTAAAAGAAACA CACACGAATTTTGTAGTGCAAAAATAACATATTTTAATTTAGTACTTTTT GTAGTTCCAACATCTATCTATCTCAGCGCCAACATACTCTCTATTTCTCT TTCTCTGTATCTCCTCTATCTCTCTGTATATCTTTCTATCTGTTCAATTA TATTTTACTCTTATAACAACTAACTTTGATCTTAAGAATCTTTTTACTAA CTTTCTTCCAAAACAGAAACCACATAGAACTCTTTCACTAGAGCCACACC TGTAGCATATACTAAACAAATCTATAAGAGTACACACAATCACAGATACA CTCACTGAATGTTAGCGAAAAATATACAGAAAAGACGATACAGTTACAAA ATTAGCTATGCACTTAGAGAAACACACAACAAACGACTCATGAATATACT ATAAACCAATGGTGAATTTTTACTACTTGTAGGCGCGTTTTTGAAGAATA ATATTAAATCCGTTTGAACAGCCCGATAATGCTGGGCCTTAGCTTCACAT CCATAGATTCCTCACAATACAAAGGGCACTAAATTAATATCAAAGATCTT ACCAATATAGCGGAATGCTAACATAATGGATTATTGGTATTGGTTGATGA ATATTGCAAGGAAATGAGAAAAACCAAAGAGACACAAAAAGCCCACAGAA CCAACTCTCTAGAAGAATCAGCAGTCGATTTTATGTTTTAATTTGAGTTA TGGTTTAGTTTTCGGTTTCGATTATCCATCATGAAAATAGCAGATAATTC AGATTTTAAATTGACTTTACACCTCAGCTCACCACGCACACATCTAAATA GTGCTTCCCGCCACTCACCTCAATTCGCCATTTCACCCACTCACCCCAAC TCACCACACCAAGTGGCGCACGCGCCACAAATTCCACCAGTGGCGTACGC AGGATTCTCTCAAAGGGGCTTGAAAATATTTTCTTATTTTCATTTAATTC TGTAATATGCTGAAGAAGAAGAGCCCTCTCCCTGCGCACGCCACTCTCTT CAACCACCAACACGGTTGCGCAGCCGCGACAGAGAGATATGCCTTCGCTC TCTCGCAGCTGCGCCACGCCCACCACCCACAGCCACCCACGAAAATGGTG CTTTTTCACATACGACACCACTGTCTGACTATATTTTTCATCATGTACGC CATCGCAATCCATGCCACAGTGGTCGCAATGCCGCGACAGCCGCTCCACA AGTGCCACCAAATACTATTTTATTTGTGTATTTATTTTCACCGAAAATGA ATTCCTGCACTTTGTGGGCGGCAGGCGCGCGTGCATTGCCGAGCATCTGA AACGTCGAGGGTAGAGATGAAAATATCGGGCGCCGCCTGTCACCGGCGAG TATTACCCAATATAAATCGCTAATGGCCACAGGCGGTCGCCGCCCCAACT GTAATTGTGAACGTCCGTGCGGCCATTGCCCAAAAATGATTACATAATAC GATCGAACGAACCGAATGAGAAGCCAAAGAACTAAGGATACGAAAGCAGC TGAAATAACGTTGGAGGATCGGCGCGGGATTTTGGCAAATCGAGCTTCTT CTGCTTGGGGCTTTTCAAGCATAAGGCTTTGAGGCTTTCTTTTTACTAAG CAGGTGCTTCCAACTCGCTTTGCTGGACAAATGCCCGACATAAGTTACCA TTCAAAATCGCTTGGCCAAATCAGCATTACCCCCACAAATTGTTAAGGAC TAGCGAGTAAATTTTAATCGTATTCTCGAATATAAATTGAGCAAACTTTA AGTCAACGAGCACATTTGAAACTATCAAGACATTGTAACCAGCAAATAAA CAAAGTTAAGCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7335002..7339073 | 890..4961 | 20180 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 7329997..7330583 | 1..587 | 2890 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 7332012..7332103 | 586..677 | 400 | 95.7 | Plus |
chr2R | 21145070 | chr2R | 7332158..7332234 | 676..752 | 370 | 98.7 | Plus |
chr2R | 21145070 | chr2R | 7333599..7333658 | 750..809 | 300 | 100 | Plus |
chr2R | 21145070 | chr2R | 7334625..7334678 | 810..863 | 270 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 11447533..11451608 | 890..4965 | 20290 | 99.9 | Plus |
2R | 25286936 | 2R | 11442526..11443112 | 1..587 | 2935 | 100 | Plus |
2R | 25286936 | 2R | 11444538..11444629 | 586..677 | 460 | 100 | Plus |
2R | 25286936 | 2R | 11444684..11444760 | 676..752 | 385 | 100 | Plus |
2R | 25286936 | 2R | 11446130..11446189 | 750..809 | 300 | 100 | Plus |
2R | 25286936 | 2R | 11447156..11447209 | 810..863 | 270 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 11448732..11452807 | 890..4965 | 20290 | 99.8 | Plus |
2R | 25260384 | 2R | 11443725..11444311 | 1..587 | 2935 | 100 | Plus |
2R | 25260384 | 2R | 11445737..11445828 | 586..677 | 460 | 100 | Plus |
2R | 25260384 | 2R | 11445883..11445959 | 676..752 | 385 | 100 | Plus |
2R | 25260384 | 2R | 11447329..11447388 | 750..809 | 300 | 100 | Plus |
2R | 25260384 | 2R | 11448355..11448408 | 810..863 | 270 | 100 | Plus |
2R | 25260384 | 2R | 11448467..11448498 | 861..892 | 160 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Tv1 | 6868 | Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). | 5834..6067 | 2423..2188 | 164 | 59 | Minus |
rooA | 7621 | rooA ROOA_LTR 7621bp | 5867..5964 | 3006..2911 | 134 | 61.2 | Minus |
gypsy4 | 6852 | gypsy4 GYPSY4 6852bp | 213..272 | 2229..2288 | 120 | 66.7 | Plus |
gypsy4 | 6852 | gypsy4 GYPSY4 6852bp | 6783..6842 | 2229..2288 | 120 | 66.7 | Plus |
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 534..598 | 537..602 | 120 | 66.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7329997..7330577 | 1..581 | 99 | <- | Plus |
chr2R | 7332008..7332101 | 582..675 | 92 | -> | Plus |
chr2R | 7332158..7332234 | 676..752 | 98 | -> | Plus |
chr2R | 7333602..7333658 | 753..809 | 100 | -> | Plus |
chr2R | 7334625..7334677 | 810..862 | 100 | -> | Plus |
chr2R | 7334739..7334767 | 863..891 | 100 | -> | Plus |
chr2R | 7335004..7337323 | 892..3211 | 97 | == | Plus |
chr2R | 7337414..7339073 | 3302..4961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33472-RA | 1..255 | 704..958 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
qvr-RB | 1..188 | 704..891 | 100 | -> | Plus |
qvr-RB | 262..477 | 892..1107 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
qvr-RB | 1..188 | 704..891 | 100 | -> | Plus |
qvr-RB | 262..477 | 892..1107 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33472-RA | 1..255 | 704..958 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
qvr-RB | 1..188 | 704..891 | 100 | -> | Plus |
qvr-RB | 262..477 | 892..1107 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33472-RA | 1..4961 | 1..4961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
qvr-RB | 1..891 | 1..891 | 100 | -> | Plus |
qvr-RB | 965..5034 | 892..4961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
qvr-RB | 22..912 | 1..891 | 100 | -> | Plus |
qvr-RB | 986..5055 | 892..4961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33472-RA | 1..4961 | 1..4961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
qvr-RB | 22..912 | 1..891 | 100 | -> | Plus |
qvr-RB | 986..5055 | 892..4961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11447156..11447208 | 810..862 | 100 | -> | Plus |
2R | 11447270..11447298 | 863..891 | 100 | -> | Plus |
2R | 11442526..11443112 | 1..587 | 100 | -> | Plus |
2R | 11444540..11444627 | 588..675 | 100 | -> | Plus |
2R | 11444684..11444760 | 676..752 | 100 | -> | Plus |
2R | 11446133..11446189 | 753..809 | 100 | -> | Plus |
2R | 11447535..11451604 | 892..4961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11447156..11447208 | 810..862 | 100 | -> | Plus |
2R | 11447270..11447298 | 863..891 | 100 | -> | Plus |
2R | 11442526..11443112 | 1..587 | 100 | -> | Plus |
2R | 11444540..11444627 | 588..675 | 100 | -> | Plus |
2R | 11444684..11444760 | 676..752 | 100 | -> | Plus |
2R | 11446133..11446189 | 753..809 | 100 | -> | Plus |
2R | 11447535..11451604 | 892..4961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11447156..11447208 | 810..862 | 100 | -> | Plus |
2R | 11447270..11447298 | 863..891 | 100 | -> | Plus |
2R | 11442526..11443112 | 1..587 | 100 | -> | Plus |
2R | 11444540..11444627 | 588..675 | 100 | -> | Plus |
2R | 11444684..11444760 | 676..752 | 100 | -> | Plus |
2R | 11446133..11446189 | 753..809 | 100 | -> | Plus |
2R | 11447535..11451604 | 892..4961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7330031..7330617 | 1..587 | 100 | -> | Plus |
arm_2R | 7332045..7332132 | 588..675 | 100 | -> | Plus |
arm_2R | 7332189..7332265 | 676..752 | 100 | -> | Plus |
arm_2R | 7333638..7333694 | 753..809 | 100 | -> | Plus |
arm_2R | 7334661..7334713 | 810..862 | 100 | -> | Plus |
arm_2R | 7334775..7334803 | 863..891 | 100 | -> | Plus |
arm_2R | 7335040..7339109 | 892..4961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11443725..11444311 | 1..587 | 100 | -> | Plus |
2R | 11445739..11445826 | 588..675 | 100 | -> | Plus |
2R | 11445883..11445959 | 676..752 | 100 | -> | Plus |
2R | 11447332..11447388 | 753..809 | 100 | -> | Plus |
2R | 11448355..11448407 | 810..862 | 100 | -> | Plus |
2R | 11448469..11448497 | 863..891 | 100 | -> | Plus |
2R | 11448734..11452803 | 892..4961 | 99 | Plus |
Translation from 703 to 1083
> GH06755.pep MWTQRNAVGNWLLVLTAVIGFLTFIWIPQTSAECQTRSIYCYECDSWTDA RCKDPFNYTALPRWCDACVRHSYRSIYSWSITCAWWKVQAVDVCAFVRKI CAILVKIYTLMVASCISYPSQWQYLG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12556-PA | 96 | GF12556-PA | 1..87 | 1..78 | 300 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20204-PA | 158 | GG20204-PA | 1..104 | 1..112 | 350 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21388-PA | 83 | GH21388-PA | 1..83 | 1..84 | 373 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
qvr-PB | 158 | CG33472-PB | 1..86 | 1..77 | 361 | 81.6 | Plus |
qvr-PC | 155 | CG33472-PC | 1..83 | 1..77 | 248 | 62.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18565-PA | 265 | GI18565-PA | 1..86 | 1..77 | 254 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11411-PA | 85 | GL11411-PA | 1..85 | 1..84 | 391 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24714-PA | 85 | GA24714-PA | 1..85 | 1..84 | 392 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21292-PA | 84 | GM21292-PA | 1..84 | 1..84 | 443 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10799-PA | 84 | GD10799-PA | 1..84 | 1..84 | 441 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20359-PA | 85 | GJ20359-PA | 1..85 | 1..84 | 387 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19387-PA | 88 | GK19387-PA | 7..88 | 6..84 | 380 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12364-PA | 158 | GE12364-PA | 1..104 | 1..112 | 350 | 63.1 | Plus |
Translation from 2649 to 2957
> GH06755.hyp MRTNFVAWAQVSHKPRKKIYKNYKSQVQLRTVFLVRSCLARRWMGYRILA GLSWWFTNTLSLLPRSSTLLPPSRSRKNPKTLSEIPYAMLTPNVFRFICI IS*