Clone GH06781 Report

Search the DGRC for GH06781

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:67
Well:81
Vector:pOT2
Associated Gene/TranscriptCG15093-RA
Protein status:GH06781.pep: gold
Preliminary Size:1300
Sequenced Size:1238

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15093 2001-01-01 Release 2 assignment
CG15093 2003-01-01 Sim4 clustering to Release 3
CG15093 2003-01-14 Blastp of sequenced clone
CG15093 2008-04-29 Release 5.5 accounting
CG15093 2008-08-15 Release 5.9 accounting
CG15093 2008-12-18 5.12 accounting

Clone Sequence Records

GH06781.complete Sequence

1238 bp (1238 high quality bases) assembled on 2003-01-14

GenBank Submission: AY069057

> GH06781.complete
TCCGATCACGTAGAACTTTTGCAGTTTCAGCCGTATCCCCTTAGATTTCT
TACACCAACAGACATGTCGCTCCGTGTGATGTCCCCCGCTATGCTGAATG
CCTGGAGCCAGACCCTCGTGAGGGCCATGTCCACCCAGGGCGGAGCCAAG
AACATCGGCTTCGTGGGTCTGGGCAACATGGGTGCCAACATGGCCAGCAA
TCTAATCAAGGCCGGCCACAAGCTGCATGTCTTCGATATCTCCAAGCCCG
CCTGCGATGGTCTGGCCGCCAAGGGAGCCACCGTCTACGCCAAGACCTCG
GAGCTGGCCAAGAACTCGGACTTTGTGATCACCATGCTGCCGAACAATGC
CATTGTGGATGCCTCCTACGATGAGATGACTGCCGATGGCGTCAACAAGG
ACACCATCTTCATTGACTCGTCGACGATCTCGCCGGATTTGGTCAAGTCG
TTGCAGAAGAAGATCAGCGCCAAGGGAGCTCGGTTTATCGATGCCCCCGT
TTCCGGCGGAGTTCCCGGCGCCGAGCAGGCCACCCTCACCTTCATGGTGG
GCGGCACCGAGGCGGAGTACAATGCCGTCAAGGCCGTCCTAGAGTGCATG
GGCAAGAAGATCACCCACTGCGGCGTCTATGGCATGGGCCAGGCCGCCAA
GCTGTGCAACAACATGATGCTGGCCATCTCGATGATCGGTGTTTCGGAGG
CCATGAATCTGGCGGTGCGCCAGGGTCTCGATGCCAATGTCTTCGCCGAG
ATCATCAACTCCTCCACCGGACGCTGCTGGGCCTCGGAGATCTACAACCC
TGTGCCCGGAGTCTGCCCCAGTGCCCCAGCCAACAGGGACTACGCCGGCG
GTTTCTCCTCGGCTCTGATCACCAAGGATCTGGGTCTGGCCTCCGGAGTG
GCCAACGCTTCCAACTCACCCATCCCGCTGGGATCTCTGGCGCACAAGGT
CTACCAGTCGCTGTGCGATAAGGGTCTGGGCAACAAGGACTTCTCCGTGG
TGTACGACCTGATGAAGAAGGAGAAGTTCAGCGTTTAGGTTACTCACAGA
CTACAGGTTGTGGTGGCCACAACCACGTCATGTCCACATCCAAACCAGTC
CTGCATTTAAATATAGCACTAAGTTCCCTCTATTTCGATTTCTATTGTGA
CTGTTCCCTGTTCTATGCAAATAATACGTACATATATTAAAGACGTATCG
TATTGAGTGAAAAAGTTCCAAAAAAAAAAAAAAAAAAA

GH06781.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:27:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15093-RB 1373 CG15093-RB 88..1307 1..1220 6100 100 Plus
CG15093.a 1380 CG15093.a 153..1314 59..1220 5810 100 Plus
CG15093-RA 1289 CG15093-RA 129..1289 59..1219 5805 100 Plus
CG15093.a 1380 CG15093.a 83..144 1..62 310 100 Plus
CG15093-RA 1289 CG15093-RA 4..64 1..61 305 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:48:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 14662792..14663952 1219..59 5625 99 Minus
chr2R 21145070 chr2R 14664017..14664077 61..1 290 98.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:35:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:48:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18775668..18776829 1220..59 5810 100 Minus
2R 25286936 2R 18776894..18776954 61..1 305 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:04:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 18776867..18778028 1220..59 5810 100 Minus
2R 25260384 2R 18778093..18778153 61..1 305 100 Minus
Blast to na_te.dros performed on 2019-03-16 09:48:19 has no hits.

GH06781.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:48:58 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 14662792..14663949 62..1219 98 <- Minus
chr2R 14664017..14664077 1..61 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:21:35 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
CG15093-RA 1..975 64..1038 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:58:04 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
CG15093-RE 1..975 64..1038 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:58:05 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
CG15093-RB 1..975 64..1038 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:48:52 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
CG15093-RA 1..975 64..1038 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:21:08 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
CG15093-RB 1..975 64..1038 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:14:30 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
CG15093-RB 88..1306 1..1219 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:58:04 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
CG15093-RB 23..1241 1..1219 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:58:05 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
CG15093-RB 25..1243 1..1219 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:48:53 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
CG15093-RB 88..1306 1..1219 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:21:08 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
CG15093-RB 25..1243 1..1219 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:48:58 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18775669..18776826 62..1219 100 <- Minus
2R 18776894..18776954 1..61 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:48:58 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18775669..18776826 62..1219 100 <- Minus
2R 18776894..18776954 1..61 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:48:58 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18775669..18776826 62..1219 100 <- Minus
2R 18776894..18776954 1..61 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:58:05 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14663174..14664331 62..1219 100 <- Minus
arm_2R 14664399..14664459 1..61 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:20:18 Download gff for GH06781.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18776868..18778025 62..1219 100 <- Minus
2R 18778093..18778153 1..61 100   Minus

GH06781.hyp Sequence

Translation from 1 to 1037

> GH06781.hyp
SDHVELLQFQPYPLRFLTPTDMSLRVMSPAMLNAWSQTLVRAMSTQGGAK
NIGFVGLGNMGANMASNLIKAGHKLHVFDISKPACDGLAAKGATVYAKTS
ELAKNSDFVITMLPNNAIVDASYDEMTADGVNKDTIFIDSSTISPDLVKS
LQKKISAKGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECM
GKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQGLDANVFAE
IINSSTGRCWASEIYNPVPGVCPSAPANRDYAGGFSSALITKDLGLASGV
ANASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDLMKKEKFSV*

GH06781.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:23:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG15093-PE 324 CG15093-PE 1..324 22..345 1651 100 Plus
CG15093-PA 324 CG15093-PA 1..324 22..345 1651 100 Plus
CG15093-PB 324 CG15093-PB 1..324 22..345 1651 100 Plus
CG4747-PC 602 CG4747-PC 316..597 50..335 199 22.1 Plus
CG4747-PA 602 CG4747-PA 316..597 50..335 199 22.1 Plus

GH06781.pep Sequence

Translation from 63 to 1037

> GH06781.pep
MSLRVMSPAMLNAWSQTLVRAMSTQGGAKNIGFVGLGNMGANMASNLIKA
GHKLHVFDISKPACDGLAAKGATVYAKTSELAKNSDFVITMLPNNAIVDA
SYDEMTADGVNKDTIFIDSSTISPDLVKSLQKKISAKGARFIDAPVSGGV
PGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNN
MMLAISMIGVSEAMNLAVRQGLDANVFAEIINSSTGRCWASEIYNPVPGV
CPSAPANRDYAGGFSSALITKDLGLASGVANASNSPIPLGSLAHKVYQSL
CDKGLGNKDFSVVYDLMKKEKFSV*

GH06781.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13754-PA 512 GF13754-PA 1..321 1..321 1566 89.7 Plus
Dana\GF13754-PA 512 GF13754-PA 285..510 90..322 615 52.3 Plus
Dana\GF15736-PA 683 GF15736-PA 320..603 29..316 179 21.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20945-PA 324 GG20945-PA 1..324 1..324 1679 96.9 Plus
Dere\GG10076-PA 602 GG10076-PA 316..597 29..314 182 22.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:09:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19800-PA 322 GH19800-PA 1..321 1..321 1417 81 Plus
Dgri\GH11066-PA 617 GH11066-PA 333..612 31..314 172 21.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15093-PE 324 CG15093-PE 1..324 1..324 1651 100 Plus
CG15093-PA 324 CG15093-PA 1..324 1..324 1651 100 Plus
CG15093-PB 324 CG15093-PB 1..324 1..324 1651 100 Plus
CG4747-PC 602 CG4747-PC 316..597 29..314 199 22.1 Plus
CG4747-PA 602 CG4747-PA 316..597 29..314 199 22.1 Plus
CG4747-PB 603 CG4747-PB 316..598 29..314 193 22.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:09:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20341-PA 322 GI20341-PA 1..320 1..320 1430 81.9 Plus
Dmoj\GI17584-PA 612 GI17584-PA 326..607 29..314 167 20.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:09:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11305-PA 325 GL11305-PA 1..325 1..324 1607 92 Plus
Dper\GL18953-PA 426 GL18953-PA 142..421 31..314 177 21.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:09:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13484-PA 325 GA13484-PA 1..325 1..324 1607 92 Plus
Dpse\GA18401-PA 612 GA18401-PA 328..607 31..314 168 21.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:09:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19876-PA 324 GM19876-PA 1..324 1..324 1692 98.1 Plus
Dsec\GM17855-PA 603 GM17855-PA 316..598 29..314 176 22.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25359-PA 305 GD25359-PA 1..305 1..324 1571 93.2 Plus
Dsim\GD23648-PA 602 GD23648-PA 316..597 29..314 181 22.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22064-PA 322 GJ22064-PA 1..322 1..322 1457 83.2 Plus
Dvir\GJ17926-PA 614 GJ17926-PA 328..609 29..314 167 21 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:09:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12956-PA 322 GK12956-PA 1..320 1..323 1271 74.1 Plus
Dwil\GK12716-PA 647 GK12716-PA 331..612 29..314 168 21 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13884-PA 324 GE13884-PA 1..324 1..324 1683 97.5 Plus
Dyak\GE18889-PA 602 GE18889-PA 316..597 29..314 182 22.1 Plus