Clone GH06785 Report

Search the DGRC for GH06785

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:67
Well:85
Vector:pOT2
Associated Gene/TranscriptDppIII-RB
Protein status:GH06785.pep: gold
Sequenced Size:2351

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7415 2002-11-11 Blastp of sequenced clone
CG7415 2003-01-01 Sim4 clustering to Release 3
DppIII 2008-04-29 Release 5.5 accounting
DppIII 2008-08-15 Release 5.9 accounting
DppIII 2008-12-18 5.12 accounting

Clone Sequence Records

GH06785.complete Sequence

2351 bp (2351 high quality bases) assembled on 2002-11-11

GenBank Submission: BT001402

> GH06785.complete
TTTTAAAGCTGCAGCACCAACCTTCCCCAACCCGCTGAGATGGCCAGTAA
AACCGCGCACTTCGTCCTGCCTAACACGCAGCCCATTGCCGATTTGGACT
GCAAGAGTGCCTTCGAGAATCTCACCGAGAAGGAGAAGCTCTACGCCCAC
CACTTCAGCCAGGCCTCCTGGGACGGCGGACTCATTGCCTTGATCCAGTC
CAGTCCGGAGGCGCCGCTCATCTTCTCCCTGCTGCACCGCATTTTCCTAG
CCGAAAAGATTCCTGTTCTTAGGGCGAAAGCCCTGGAGGCGGGAGTGTCT
GCTGATGATTTTACGGCCTTCCTAGTGTACGCCTGCGGTGTGTTCGCCAA
CGCGGGCAACTACAAGGGTATGGGCGACAGCAAGATCGTTCCCAATCTCT
CAGAAAAGCAATTTGAGACTATAGTAAAGGCATCCGCTGCTTACAGCGAT
GAGCCGCGCGTAGGCAAGATCTTCGAGAAGGTCAAGAATCTGATTTATGC
GCTCGAGTCGCGTAACGAGATCCTGGGCTTTGCTCCCGACGGAATCACCA
CCTACTGGTCGGATAACTGCACCAAGGAGGACTCCGAGATCGTGAACGCT
TGGCTGACCTCAAAGCGTATCGAACCGTACATGTGCCGGACCTTCAAGAT
AGTTGAAAATGGTCAAACCGTCTACGATGTAAAGCTGGGCTCCGTGGCGG
AGTCCACGCAGGACGGCATCACACTTCCGCTGGAAGAGTATAATGGCAAC
AAGTTTAGGGTGACACGCGGTGATTACCAGAAGCTGCTTCAGCGCGTCAA
CCAGCATCTGCTGCAGGCCCAGAAATACGCAGCCAATGAAAACGAGTCCA
AGATGATCGAGCACTATGTCCGATCCTTTGAACAGGGCTCGCTGGACGAG
CACAAGAACGGATCGCGTTGGTGGATCAAGGACAAGGGACCTGTCATCGA
GACCTACATTGGTTTCATTGAGACATACAGGGATCCTGCTGGAGGTCGGG
CTGAATTCGAGGGCTTCGTGGCCATGGTGAACAAGGAGAGCTCGGCCAAA
TTCTCCGAGCTGGTGAACCGCGCCGAGAAACTAATAGAGTACCTGCCCTG
GACGGAGCCTTACGAGAAGGACTCTTACCTGAAGCCAGACTTCACATCCC
TGGATGTCCTCACATTTGCCGGCAGCGGAGTACCAGCGGGCATCAATATT
CCCAATTACGACGAAATCCGCCAGGATGAAGGCTTCAAGAACGTCTCGCT
GGGCAATGTGCTGGCCAACATCAACCGCAAGGATCCCATTCCTTTCCTCA
CCGAGGAGGATCAAACTCTGATGAAAGAGTACAAGGTGAAGGCTTTTGAG
GTGCAAGTGGGCCTCCATGAACTCCTAGGCCATGGTAGTGGCAAGCTATT
CCGCATCGACGAAAATGGTGTGTACAACTTTGACAAGGAGAACACTAAGA
ACCTGGTCACCGGTGAACCCATCACCAAGTGGTATCTTCCTGGAGAAACT
TACGACACCAAGTTCGGAGCAATTGGTTCCTCGTACGAGGAATGCCGCGC
CGAGGCGGTGGGCTTGTATCTCTCCCTGCAGCGTGACATCCTGGAGATCT
TTGGCTTCAAGGACAAAGCCGAGCAGGACAACATCATCTATGTCAACTGG
CTGAGTCTCATCTGGAACGGCATGGGTGTGGCTCTGGAAATGTTCAACCC
GAAGTCCAAGCTGTGGCTCCAGGCGCACTCTCGCGCTCGTTTCGTGATCA
TGAAGGTGCTGCTGGAGGCAGGCGAAGGACTCGTTAAGGTCGAGGAAACC
GAAAAGGGTAAAAACCTTTTGCTGACGGTGGATCGCAGCAAGATCGATAC
CGTGGGCAGGAAGGCGCTGGGCGATTTCCTGACCAAGCTGCAGGTGTACA
AATCCACCGCCGACATCGAGGCAGCTTCCAAGATGTACGAACACTACTCG
AAGGTCGACGAGAGCGGATCGCATCCGTGGGCCAAGTGGCGGGATATCTG
CCTGGCGCACAAGAAGCCGCGTATGATTCTCGTCCAGGCCAACACGGCGA
TCGGCCAGGACCAAAAGGTCCAGCTGAAGACCTACGAGCCCACCCACGAG
GGGTACATCCAGTCATGGGTGGAGCGCTACCCCAACACTGACATCGACGA
TCTTCTGGAGAGCATCGTGGAGAAGGACAAGAAGTATTTCCCGACTGCCT
TCAACAACTGAGAACATTTCGCATTTAACATTTTCGCCTTCATTATCAAT
TCAATTTGTTAACTATGATTTTGAAAAAAAATATATAAAAATATATATAG
TCATCTAATGACCAACAATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
A

GH06785.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:35:11
Subject Length Description Subject Range Query Range Score Percent Strand
DppIII-RB 2427 DppIII-RB 78..2402 1..2325 11625 100 Plus
DppIII-RC 2640 DppIII-RC 293..2615 3..2325 11600 99.9 Plus
DppIII.b 2644 DppIII.b 297..2619 3..2325 11600 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:02:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 4171471..4173478 315..2322 10040 100 Plus
chr3R 27901430 chr3R 4171104..4171413 7..316 1550 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:35:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:02:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8345458..8347468 315..2325 10055 100 Plus
3R 32079331 3R 8345091..8345400 7..316 1550 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:09:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 8086289..8088299 315..2325 10055 100 Plus
3R 31820162 3R 8085922..8086231 7..316 1550 100 Plus
Blast to na_te.dros performed on 2019-03-16 17:02:13 has no hits.

GH06785.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:03:10 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 4171097..4171412 1..315 99 -> Plus
chr3R 4171472..4173478 316..2322 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:21:39 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
DppIII-RC 149..2361 1..2211 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:06:40 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
DppIII-RC 149..2361 1..2211 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:50:43 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
DppIII-RC 149..2361 1..2211 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:56:29 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
DppIII-RC 149..2361 1..2211 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:49:28 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
DppIII-RC 149..2361 1..2211 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:26:23 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
DppIII-RB 74..2395 1..2322 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:06:40 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
DppIII-RB 75..2396 1..2322 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:50:43 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
DppIII-RB 77..2398 1..2322 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:56:29 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
DppIII-RB 74..2395 1..2322 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:49:28 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
DppIII-RB 77..2398 1..2322 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:03:10 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8345084..8345399 1..315 99 -> Plus
3R 8345459..8347465 316..2322 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:03:10 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8345084..8345399 1..315 99 -> Plus
3R 8345459..8347465 316..2322 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:03:10 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8345084..8345399 1..315 99 -> Plus
3R 8345459..8347465 316..2322 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:50:43 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4170806..4171121 1..315 99 -> Plus
arm_3R 4171181..4173187 316..2322 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:28:59 Download gff for GH06785.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8085915..8086230 1..315 99 -> Plus
3R 8086290..8088296 316..2322 100   Plus

GH06785.hyp Sequence

Translation from 1 to 2210

> GH06785.hyp
LCSCSTNLPQPAEMASKTAHFVLPNTQPIADLDCKSAFENLTEKEKLYAH
HFSQASWDGGLIALIQSSPEAPLIFSLLHRIFLAEKIPVLRAKALEAGVS
ADDFTAFLVYACGVFANAGNYKGMGDSKIVPNLSEKQFETIVKASAAYSD
EPRVGKIFEKVKNLIYALESRNEILGFAPDGITTYWSDNCTKEDSEIVNA
WLTSKRIEPYMCRTFKIVENGQTVYDVKLGSVAESTQDGITLPLEEYNGN
KFRVTRGDYQKLLQRVNQHLLQAQKYAANENESKMIEHYVRSFEQGSLDE
HKNGSRWWIKDKGPVIETYIGFIETYRDPAGGRAEFEGFVAMVNKESSAK
FSELVNRAEKLIEYLPWTEPYEKDSYLKPDFTSLDVLTFAGSGVPAGINI
PNYDEIRQDEGFKNVSLGNVLANINRKDPIPFLTEEDQTLMKEYKVKAFE
VQVGLHELLGHGSGKLFRIDENGVYNFDKENTKNLVTGEPITKWYLPGET
YDTKFGAIGSSYEECRAEAVGLYLSLQRDILEIFGFKDKAEQDNIIYVNW
LSLIWNGMGVALEMFNPKSKLWLQAHSRARFVIMKVLLEAGEGLVKVEET
EKGKNLLLTVDRSKIDTVGRKALGDFLTKLQVYKSTADIEAASKMYEHYS
KVDESGSHPWAKWRDICLAHKKPRMILVQANTAIGQDQKVQLKTYEPTHE
GYIQSWVERYPNTDIDDLLESIVEKDKKYFPTAFNN*

GH06785.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:23:50
Subject Length Description Subject Range Query Range Score Percent Strand
DppIII-PC 786 CG7415-PC 53..786 3..736 3844 100 Plus
DppIII-PB 723 CG7415-PB 1..723 14..736 3784 100 Plus

GH06785.pep Sequence

Translation from 39 to 2210

> GH06785.pep
MASKTAHFVLPNTQPIADLDCKSAFENLTEKEKLYAHHFSQASWDGGLIA
LIQSSPEAPLIFSLLHRIFLAEKIPVLRAKALEAGVSADDFTAFLVYACG
VFANAGNYKGMGDSKIVPNLSEKQFETIVKASAAYSDEPRVGKIFEKVKN
LIYALESRNEILGFAPDGITTYWSDNCTKEDSEIVNAWLTSKRIEPYMCR
TFKIVENGQTVYDVKLGSVAESTQDGITLPLEEYNGNKFRVTRGDYQKLL
QRVNQHLLQAQKYAANENESKMIEHYVRSFEQGSLDEHKNGSRWWIKDKG
PVIETYIGFIETYRDPAGGRAEFEGFVAMVNKESSAKFSELVNRAEKLIE
YLPWTEPYEKDSYLKPDFTSLDVLTFAGSGVPAGINIPNYDEIRQDEGFK
NVSLGNVLANINRKDPIPFLTEEDQTLMKEYKVKAFEVQVGLHELLGHGS
GKLFRIDENGVYNFDKENTKNLVTGEPITKWYLPGETYDTKFGAIGSSYE
ECRAEAVGLYLSLQRDILEIFGFKDKAEQDNIIYVNWLSLIWNGMGVALE
MFNPKSKLWLQAHSRARFVIMKVLLEAGEGLVKVEETEKGKNLLLTVDRS
KIDTVGRKALGDFLTKLQVYKSTADIEAASKMYEHYSKVDESGSHPWAKW
RDICLAHKKPRMILVQANTAIGQDQKVQLKTYEPTHEGYIQSWVERYPNT
DIDDLLESIVEKDKKYFPTAFNN*

GH06785.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:44:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18347-PA 794 GF18347-PA 72..794 1..723 3545 89.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 07:44:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10257-PA 786 GG10257-PA 64..786 1..723 3803 97.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 07:44:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14358-PA 751 GH14358-PA 30..750 1..722 3401 85.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:29:17
Subject Length Description Subject Range Query Range Score Percent Strand
DppIII-PC 786 CG7415-PC 64..786 1..723 3784 100 Plus
DppIII-PB 723 CG7415-PB 1..723 1..723 3784 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 07:44:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24885-PA 722 GI24885-PA 1..721 1..722 3372 85.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:44:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24190-PA 791 GL24190-PA 70..790 1..722 3470 87.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:44:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20334-PA 786 GA20334-PA 65..785 1..722 3479 87.8 Plus
Dpse\GA20334-PB 722 GA20334-PB 1..721 1..722 3477 87.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23728-PA 786 GM23728-PA 64..786 1..723 3864 99.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 07:44:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18539-PA 786 GD18539-PA 64..786 1..723 3873 99.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 07:44:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24528-PA 722 GJ24528-PA 1..721 1..722 3420 86.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 07:44:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13184-PA 723 GK13184-PA 1..723 1..723 3487 87.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 07:44:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25873-PA 786 GE25873-PA 64..786 1..723 3784 97 Plus