BDGP Sequence Production Resources |
Search the DGRC for GH07062
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 70 |
Well: | 62 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5555-RA |
Protein status: | GH07062.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1976 |
Gene | Date | Evidence |
---|---|---|
CG5555 | 2001-01-01 | Release 2 assignment |
CG5555 | 2001-07-04 | Blastp of sequenced clone |
CG5555 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5555 | 2008-04-29 | Release 5.5 accounting |
CG5555 | 2008-08-15 | Release 5.9 accounting |
CG5555 | 2008-12-18 | 5.12 accounting |
1976 bp (1976 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047557
> GH07062.complete TTCACATAGAAAAATAACAAACTCATTTCGCACAGAGTAAAATAGAAAAT TACACTTTGAACGGTCTTTAGGCTTTTTTTTATATATAAAAACTAATGAA AATTATGCCCGTGTCATGCTAGAAAACATTTCCCTGTGTGTGATCAAGAT CGAAACGGATTTGGATCCCAGTGCAGATTCTGAGGGAGCTGTGTCCGCCG AACATCCAACCAATCCCCGAGTGCTCAAGGAGCGGGAACGCGACCGCGGA CTTCGCCAATCCCGCGACATCACCATCGAAACGTACACAAACCAGCGTTG GAAGCGGGAATTGAGTGAACCCAGACAGCAGGAGATGAACTGGGTAGCCG CCGTGCAGCATGTGAACAGCCCCTCGGCGGGCAGCTCCCGGGAGATAACT CCTCGGAGCGGCGATGATGGCCAGGCGGGAGCCAGCGCCTCCAACTTTCC CCAAGAGATAGGGTACTTCTCCGGCAATCCCATCGTCGAGGTGACCAAAG GTCTTATCCATCTCTACAAGAAAAACGAACGCAAGGCCATCAAGGAAGCT CCATCTAACCAACTCTGCCTGCTGGCCGTGCCGGCCACTCTTAACTGCCA CGATCTGCTGAACTTTATTGCCCCCTGTCATGCAGAGATTAAACACATCC AGATTGTACGTGACGGCAGCCCCAATCAGTTCATGGTGCTTTTGGAATTC CGCTCGAATGAATCCGCTTTGGAGTTCTACAAGTCCTATAATGGCAGTAC TTACAACTCACTGGAACCGGACTCGCTGTGCCACGCGGTCTGGGTATCAG AGGTGGAAAGGAGCGAGCATGGAGCACCACCAATGGGACACACCGAGCTA CCCACCTGTCCAGTGTGCCTGGAGCGCATGGACGAGAGCGTGGATGGAGT GTTGACCATATTGTGCAATCACGCCTTCCACGCCAGCTGCCTGATGAAAT GGGGTGACTCCACCTGTCCGGTGTGCCGCCATGTTCAAACTCCTGGACTG GTCGAAGATTCCGTGTGCATGGAATGCGAGGGCACCGATTCCTTATGGAT CTGCCTGATCTGCGGACATGTGGGCTGCGGACGCTACCAGGGAGGACATG CTGCTGCACACTTCCGGGCCACAAATCACACCTTTGCCATGCAGTTGGGC ACCTCAAGCGTATGGGACTATGCCGGTGACAACTTTGTGCATCGCTTATT TCAAAACAAATCCGACGGCAAGCTGGTGGCATCGCAAACCGAGAAAGATG AGCGCGAGGAAAAGATTGACTCCATGCAGATGGAGTTCACATACCTGTTG ACCTCTCAGCTGGACACACAGCGCAAGTACTATGAGGAGCGCATGGAACG ATTGGAGCAGGAGTGGCAGAACCACAAGGCGACTGCCAACGACGCCAAGA CAGAGGTTTCCGAGCTTCAACAGCTTCAGCAGAACATGCAGAAAGAAAAG GTCAATTTGGAGCGCAAGTTGGCCCAGCATACAGCTAAGCTAAAGGATGT ACAGAAGCAGCTGAACGAAGAGCGTGAGTTGTCCAAGGCACTGCAGAGCA ACCAGAGCTCCTGGCACGGCAAATACAAACTCTTGGAACAGCAGTACAAC GAGTTCAAGCAAACCCACGACGCCGAGGTGACCGAATTAAAGGAACAGCT TCGCGACATTATGTTCTTTTTGGACAATCAGCAAAAGTTGGCCAACACCG AGATAGCGGGTGGCACCGTTACAGGCATTGCAGAGAAGGAACCGGATCCC AACACCCGGCGCCGTAATCGTCGCAAGAAATAAATCATAGCCACCGTACG CCGTCTTTATATCCAAGCTGCATTGTTTACCCGATCTTAGATGGCTATGC AAACCGAGTATATAAGGTTTATAACAGCTCTATATGTGATTTCCTTTGTA TAACGAAAACCTAAGGATTAAATATAACTACTACTACGTAGAAAACCATA TGTCCCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 15002554..15003346 | 1489..697 | 3965 | 100 | Minus |
chr3R | 27901430 | chr3R | 15002021..15002488 | 1956..1489 | 2340 | 100 | Minus |
chr3R | 27901430 | chr3R | 15003647..15003998 | 525..174 | 1760 | 100 | Minus |
chr3R | 27901430 | chr3R | 15004063..15004238 | 176..1 | 880 | 100 | Minus |
chr3R | 27901430 | chr3R | 15003414..15003584 | 696..526 | 855 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19178618..19179410 | 1489..697 | 3965 | 100 | Minus |
3R | 32079331 | 3R | 19178081..19178552 | 1960..1489 | 2360 | 100 | Minus |
3R | 32079331 | 3R | 19179711..19180062 | 525..174 | 1760 | 100 | Minus |
3R | 32079331 | 3R | 19180127..19180302 | 176..1 | 880 | 100 | Minus |
3R | 32079331 | 3R | 19179478..19179648 | 696..526 | 855 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 18919449..18920241 | 1489..697 | 3965 | 100 | Minus |
3R | 31820162 | 3R | 18918912..18919383 | 1960..1489 | 2360 | 100 | Minus |
3R | 31820162 | 3R | 18920542..18920893 | 525..174 | 1760 | 100 | Minus |
3R | 31820162 | 3R | 18920958..18921133 | 176..1 | 880 | 100 | Minus |
3R | 31820162 | 3R | 18920309..18920479 | 696..526 | 855 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15002021..15002488 | 1489..1956 | 100 | <- | Minus |
chr3R | 15002555..15003346 | 697..1488 | 100 | <- | Minus |
chr3R | 15003414..15003584 | 526..696 | 100 | <- | Minus |
chr3R | 15003647..15003995 | 177..525 | 100 | <- | Minus |
chr3R | 15004063..15004238 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5555-RA | 1..1668 | 116..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5555-RA | 1..1668 | 116..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5555-RA | 1..1668 | 116..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5555-RA | 1..1668 | 116..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5555-RA | 1..1668 | 116..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5555-RA | 21..1976 | 1..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5555-RA | 21..1976 | 1..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5555-RA | 21..1976 | 1..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5555-RA | 21..1976 | 1..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5555-RA | 21..1976 | 1..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19178085..19178552 | 1489..1956 | 100 | <- | Minus |
3R | 19178619..19179410 | 697..1488 | 100 | <- | Minus |
3R | 19179478..19179648 | 526..696 | 100 | <- | Minus |
3R | 19179711..19180059 | 177..525 | 100 | <- | Minus |
3R | 19180127..19180302 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19178085..19178552 | 1489..1956 | 100 | <- | Minus |
3R | 19178619..19179410 | 697..1488 | 100 | <- | Minus |
3R | 19179478..19179648 | 526..696 | 100 | <- | Minus |
3R | 19179711..19180059 | 177..525 | 100 | <- | Minus |
3R | 19180127..19180302 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19178085..19178552 | 1489..1956 | 100 | <- | Minus |
3R | 19178619..19179410 | 697..1488 | 100 | <- | Minus |
3R | 19179478..19179648 | 526..696 | 100 | <- | Minus |
3R | 19179711..19180059 | 177..525 | 100 | <- | Minus |
3R | 19180127..19180302 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15005849..15006024 | 1..176 | 100 | Minus | |
arm_3R | 15003807..15004274 | 1489..1956 | 100 | <- | Minus |
arm_3R | 15004341..15005132 | 697..1488 | 100 | <- | Minus |
arm_3R | 15005200..15005370 | 526..696 | 100 | <- | Minus |
arm_3R | 15005433..15005781 | 177..525 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18920958..18921133 | 1..176 | 100 | Minus | |
3R | 18918916..18919383 | 1489..1956 | 100 | <- | Minus |
3R | 18919450..18920241 | 697..1488 | 100 | <- | Minus |
3R | 18920309..18920479 | 526..696 | 100 | <- | Minus |
3R | 18920542..18920890 | 177..525 | 100 | <- | Minus |
Translation from 115 to 1782
> GH07062.pep MLENISLCVIKIETDLDPSADSEGAVSAEHPTNPRVLKERERDRGLRQSR DITIETYTNQRWKRELSEPRQQEMNWVAAVQHVNSPSAGSSREITPRSGD DGQAGASASNFPQEIGYFSGNPIVEVTKGLIHLYKKNERKAIKEAPSNQL CLLAVPATLNCHDLLNFIAPCHAEIKHIQIVRDGSPNQFMVLLEFRSNES ALEFYKSYNGSTYNSLEPDSLCHAVWVSEVERSEHGAPPMGHTELPTCPV CLERMDESVDGVLTILCNHAFHASCLMKWGDSTCPVCRHVQTPGLVEDSV CMECEGTDSLWICLICGHVGCGRYQGGHAAAHFRATNHTFAMQLGTSSVW DYAGDNFVHRLFQNKSDGKLVASQTEKDEREEKIDSMQMEFTYLLTSQLD TQRKYYEERMERLEQEWQNHKATANDAKTEVSELQQLQQNMQKEKVNLER KLAQHTAKLKDVQKQLNEERELSKALQSNQSSWHGKYKLLEQQYNEFKQT HDAEVTELKEQLRDIMFFLDNQQKLANTEIAGGTVTGIAEKEPDPNTRRR NRRKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18474-PA | 561 | GF18474-PA | 1..561 | 1..555 | 2654 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16130-PA | 555 | GG16130-PA | 1..555 | 1..555 | 2919 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14868-PA | 560 | GH14868-PA | 1..560 | 1..555 | 2571 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5555-PA | 555 | CG5555-PA | 1..555 | 1..555 | 2943 | 100 | Plus |
CG5555-PB | 558 | CG5555-PB | 6..558 | 3..555 | 2934 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23691-PA | 556 | GI23691-PA | 1..556 | 1..555 | 2516 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11979-PA | 563 | GL11979-PA | 1..563 | 1..555 | 2546 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18966-PA | 563 | GA18966-PA | 1..563 | 1..555 | 2546 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26923-PA | 555 | GM26923-PA | 1..555 | 1..555 | 2940 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20128-PA | 542 | GD20128-PA | 1..542 | 1..555 | 2680 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23250-PA | 561 | GJ23250-PA | 1..561 | 1..555 | 2610 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13486-PA | 554 | GK13486-PA | 1..552 | 1..555 | 2567 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25146-PA | 555 | GE25146-PA | 1..555 | 1..555 | 2913 | 95.5 | Plus |
Translation from 115 to 1782
> GH07062.hyp MLENISLCVIKIETDLDPSADSEGAVSAEHPTNPRVLKERERDRGLRQSR DITIETYTNQRWKRELSEPRQQEMNWVAAVQHVNSPSAGSSREITPRSGD DGQAGASASNFPQEIGYFSGNPIVEVTKGLIHLYKKNERKAIKEAPSNQL CLLAVPATLNCHDLLNFIAPCHAEIKHIQIVRDGSPNQFMVLLEFRSNES ALEFYKSYNGSTYNSLEPDSLCHAVWVSEVERSEHGAPPMGHTELPTCPV CLERMDESVDGVLTILCNHAFHASCLMKWGDSTCPVCRHVQTPGLVEDSV CMECEGTDSLWICLICGHVGCGRYQGGHAAAHFRATNHTFAMQLGTSSVW DYAGDNFVHRLFQNKSDGKLVASQTEKDEREEKIDSMQMEFTYLLTSQLD TQRKYYEERMERLEQEWQNHKATANDAKTEVSELQQLQQNMQKEKVNLER KLAQHTAKLKDVQKQLNEERELSKALQSNQSSWHGKYKLLEQQYNEFKQT HDAEVTELKEQLRDIMFFLDNQQKLANTEIAGGTVTGIAEKEPDPNTRRR NRRKK*