BDGP Sequence Production Resources |
Search the DGRC for GH07080
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 70 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1340-RA |
Protein status: | GH07080.pep: gold |
Preliminary Size: | 1602 |
Sequenced Size: | 1876 |
Gene | Date | Evidence |
---|---|---|
CG1340 | 2002-12-10 | Blastp of sequenced clone |
CG1340 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1340 | 2008-04-29 | Release 5.5 accounting |
CG1340 | 2008-08-15 | Release 5.9 accounting |
CG1340 | 2008-12-18 | 5.12 accounting |
1876 bp (1876 high quality bases) assembled on 2002-12-10
GenBank Submission: BT003308
> GH07080.complete TGGGATTGAAATTAGTGTCTCCGGGCTGTTAGAAATCATTTGGAAACCTT TAGCTCCGACTCCAGTCCCTTGTCTCGCGTAGACTTATCAACAGCGTCTG GAATATCAAGCTCCGGACTTTTCTTTAAGCGCTTGGTGCTCCGTGTGTCC GTGGTTAGAGGTTTTGCTTGGCTACGGCTAGGTGTATATATTTTAGTAGG ATTGGGACTAGGACCTAAGAGCATGGCCAATCGCTCCAGCCAGCGGGACC GAGAGTTCAATCGTGATAATACTTACAATAACAATCGCGACAATCGAGAC CATAATCGGGACAATCGCGATAATCGGGAGAATCGCAGTAATTTCCAAAA CTATCGCAATCGTGACAGGGATCGCGATAGGCAGCGTCAGGTGCCCACGG AACCTCCGTTCATCGCTTATGTGGGCAACCTTCCCAAGGGTCTCGTCCAG GGCGATGTGATGAAGATATTTTCGGACTTCGAGGTGAAGAATGTGCGCCT GATCAAGGACCGTGAGACGGATGAATTCAAAGGCTATGGCTACGTAGAGT TCGAGACTCTGGCACAACTGAAGAGTGCTCTCAACTGCAACGGACGCATC AAGCTAGACAACTTTTCGGCCCCCCTGCGTATCGATATAGCCGACCATCG CCGGCAGAACCCGGGTGCTCCCAGCGGTGTTGGCGGAGCTCCTCCAGCCG GAGTGGGCCACGAAAGAGGTGGTGGCGTCGGAAGAGGAGGCAGCACGGGT GCAGCAAACGGTAACAATCCCTACTACCAGAGGCGCAACTATCGGCGGGA CGACAGTGTGGGATCCCATCAGTTTAGAAGGAGGGAACCGCGCAGCAACA GCAGCAACCACCAAATGTCCAATAGCAGCCCCACACAAAGCACCACGTCC ATTAATTACAACCGCACCACTCGAGGTGGTTTCAATAGCCGTGTTGCTGT AGGTGGAAATGGCAATCGTTACCAAGGAGGAGCTCCACGTAACTTCAATG ACCGCGAGGATCAGCAATCGACCGGCAGCGGAGGATTCCAACGCAATCGC ACCTACAACTTTAACCGATCCATGAACAACAGCGTCGGCGGAGGAGGTGC TGGAGTAGGTAGGGGCGGGCATCCGCAGCGGAACTTCAATGGAAATGGAG GCGGCGGTGGATTCGGGGTCGTAAATGGAGGCGGCAACTATACCAATTTT GTGCAGAATCGCAATCGCGATCGCCGTGGACACTACAATCCAAATCACTC TGGAAGTTCTGGCGGCTACAATAACAATGGGAACAACACCTTTGGCGGGG AGAACAATCATCCTGTGCACGGAGCATCCGAGTCGGCATCATCTGGAACA GGTCCTAGTTCGAGCAATCAATTCGCCGTACGCGACGATGATGATCGGCC CAAGCTAGTGCTCAAGCCCAGGACTGTGACTGCACCCATCAACTCTCTGG CTGAAACCAAACAGGCTGCTCTCATCTTCGGAAAGGCCAAGCCCCGTGAT GATAGCTCCACGCCCGTCTCCTCGCCACGCCAGGATTTGGACGCAGGATC GTCAGGTGCTCCAAGTGATCATGATCATGATCCAGGCTTGGGCGACAACT AGATCGGATCATACGATGTTGATGGCAGTCTAGACCGGTGGGGTTCAGCA TGGCGAGATCTTTCAATAAACTTTTCATAGGCCTCTTATATTATTATTAG ATTTGTATCCACTGATGTTCGTGCACTTCGTCCTCGAAATCAAGACTGCA ATCTCTTTACTATTTAAACGTATTCAAAATTCACATTGTGCAATCCATTG GCTTGTTTTTTCGCTTGTGTTAAATTCAGTGATAAGGCAAGGAAATAAAT AAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 26548599..26549665 | 1..1067 | 5320 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 26549725..26550508 | 1067..1850 | 3830 | 99.2 | Plus |
chrX | 22417052 | chrX | 16339629..16339803 | 388..562 | 350 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 30726088..30727154 | 1..1067 | 5335 | 100 | Plus |
3R | 32079331 | 3R | 30727214..30728004 | 1067..1857 | 3940 | 99.9 | Plus |
X | 23542271 | X | 16449905..16450079 | 388..562 | 350 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 30466919..30467985 | 1..1067 | 5335 | 100 | Plus |
3R | 31820162 | 3R | 30468045..30468835 | 1067..1857 | 3940 | 99.8 | Plus |
X | 23527363 | X | 16458003..16458177 | 388..562 | 350 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6795..6882 | 836..919 | 123 | 64.8 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3290..3370 | 834..911 | 118 | 65.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1092..1155 | 826..890 | 114 | 69.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 26548599..26549665 | 1..1067 | 99 | -> | Plus |
chr3R | 26549726..26550508 | 1068..1850 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1340-RA | 1..1380 | 223..1602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1340-RA | 1..1380 | 223..1602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1340-RA | 1..1380 | 223..1602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1340-RA | 1..1380 | 223..1602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1340-RA | 1..1380 | 223..1602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1340-RA | 2..1851 | 1..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1340-RA | 2..1851 | 1..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1340-RA | 2..1851 | 1..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1340-RA | 2..1851 | 1..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1340-RA | 2..1851 | 1..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30726088..30727154 | 1..1067 | 100 | -> | Plus |
3R | 30727215..30727997 | 1068..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30726088..30727154 | 1..1067 | 100 | -> | Plus |
3R | 30727215..30727997 | 1068..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30726088..30727154 | 1..1067 | 100 | -> | Plus |
3R | 30727215..30727997 | 1068..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 26551810..26552876 | 1..1067 | 100 | -> | Plus |
arm_3R | 26552937..26553719 | 1068..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30468046..30468828 | 1068..1850 | 100 | Plus | |
3R | 30466919..30467985 | 1..1067 | 100 | -> | Plus |
Translation from 222 to 1601
> GH07080.pep MANRSSQRDREFNRDNTYNNNRDNRDHNRDNRDNRENRSNFQNYRNRDRD RDRQRQVPTEPPFIAYVGNLPKGLVQGDVMKIFSDFEVKNVRLIKDRETD EFKGYGYVEFETLAQLKSALNCNGRIKLDNFSAPLRIDIADHRRQNPGAP SGVGGAPPAGVGHERGGGVGRGGSTGAANGNNPYYQRRNYRRDDSVGSHQ FRRREPRSNSSNHQMSNSSPTQSTTSINYNRTTRGGFNSRVAVGGNGNRY QGGAPRNFNDREDQQSTGSGGFQRNRTYNFNRSMNNSVGGGGAGVGRGGH PQRNFNGNGGGGGFGVVNGGGNYTNFVQNRNRDRRGHYNPNHSGSSGGYN NNGNNTFGGENNHPVHGASESASSGTGPSSSNQFAVRDDDDRPKLVLKPR TVTAPINSLAETKQAALIFGKAKPRDDSSTPVSSPRQDLDAGSSGAPSDH DHDPGLGDN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22920-PA | 526 | GF22920-PA | 77..482 | 57..442 | 883 | 64.7 | Plus |
Dana\GF19517-PA | 369 | GF19517-PA | 258..361 | 320..434 | 156 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11771-PA | 495 | GG11771-PA | 1..488 | 1..459 | 1395 | 77.5 | Plus |
Dere\GG17966-PA | 358 | GG17966-PA | 21..110 | 55..144 | 399 | 76.7 | Plus |
Dere\GG11780-PA | 88 | GG11780-PA | 1..81 | 215..285 | 270 | 75.3 | Plus |
Dere\GG11772-PA | 80 | GG11772-PA | 1..80 | 215..282 | 229 | 68.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22433-PA | 113 | GH22433-PA | 21..110 | 55..144 | 364 | 78.9 | Plus |
Dgri\GH14211-PA | 410 | GH14211-PA | 307..392 | 316..432 | 209 | 42.7 | Plus |
Dgri\GH24789-PA | 145 | GH24789-PA | 50..140 | 320..440 | 175 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF4H2-PC | 459 | CG1340-PC | 1..459 | 1..459 | 2477 | 100 | Plus |
eIF4H2-PA | 459 | CG1340-PA | 1..459 | 1..459 | 2477 | 100 | Plus |
eIF4H1-PC | 358 | CG4429-PC | 4..343 | 38..427 | 619 | 41.4 | Plus |
eIF4H1-PD | 388 | CG4429-PD | 4..373 | 38..427 | 609 | 40.7 | Plus |
eIF4H1-PA | 325 | CG4429-PA | 4..310 | 38..427 | 582 | 39.4 | Plus |
eIF4H1-PE | 317 | CG4429-PE | 13..302 | 55..427 | 580 | 40.7 | Plus |
eIF4H1-PB | 324 | CG4429-PB | 20..309 | 55..427 | 580 | 40.7 | Plus |
glo-PA | 586 | CG6946-PA | 146..460 | 63..379 | 205 | 26.3 | Plus |
glo-PB | 586 | CG6946-PB | 146..460 | 63..379 | 205 | 26.3 | Plus |
caz-PD | 355 | CG3606-PD | 115..337 | 93..322 | 197 | 30.1 | Plus |
caz-PC | 384 | CG3606-PC | 144..366 | 93..322 | 197 | 30.1 | Plus |
caz-PB | 399 | CG3606-PB | 159..381 | 93..322 | 197 | 30.1 | Plus |
Hrb87F-PE | 385 | CG12749-PE | 79..382 | 36..322 | 182 | 28.6 | Plus |
Hrb87F-PD | 385 | CG12749-PD | 79..382 | 36..322 | 182 | 28.6 | Plus |
Hrb87F-PC | 385 | CG12749-PC | 79..382 | 36..322 | 182 | 28.6 | Plus |
Hrb87F-PA | 385 | CG12749-PA | 79..382 | 36..322 | 182 | 28.6 | Plus |
CG30122-PD | 1271 | CG30122-PD | 904..1086 | 187..384 | 177 | 32.7 | Plus |
CG30122-PB | 1271 | CG30122-PB | 904..1086 | 187..384 | 177 | 32.7 | Plus |
CG30122-PC | 1272 | CG30122-PC | 904..1086 | 187..384 | 177 | 32.7 | Plus |
CG7903-PB | 382 | CG7903-PB | 150..367 | 144..384 | 170 | 26.1 | Plus |
CG7903-PA | 384 | CG7903-PA | 152..369 | 144..384 | 170 | 26.1 | Plus |
Hrb98DE-PE | 360 | CG9983-PE | 120..357 | 66..355 | 167 | 26.8 | Plus |
Hrb98DE-PF | 361 | CG9983-PF | 121..358 | 66..355 | 167 | 26.8 | Plus |
Hrb98DE-PD | 361 | CG9983-PD | 121..358 | 66..355 | 167 | 26.8 | Plus |
Hrb98DE-PA | 364 | CG9983-PA | 124..361 | 66..355 | 167 | 26.8 | Plus |
Hrb98DE-PC | 365 | CG9983-PC | 125..362 | 66..355 | 167 | 26.8 | Plus |
Hrb98DE-PB | 365 | CG9983-PB | 125..362 | 66..355 | 167 | 26.8 | Plus |
CG5787-PB | 950 | CG5787-PB | 198..445 | 146..381 | 167 | 29.3 | Plus |
CG5787-PA | 950 | CG5787-PA | 198..445 | 146..381 | 167 | 29.3 | Plus |
NAT1-PD | 1488 | CG3845-PD | 131..390 | 121..393 | 159 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21487-PA | 206 | GI21487-PA | 21..110 | 55..144 | 411 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13513-PA | 471 | GL13513-PA | 99..469 | 54..448 | 780 | 52.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12257-PB | 471 | GA12257-PB | 99..469 | 54..448 | 786 | 54.1 | Plus |
Dpse\GA18178-PB | 335 | GA18178-PB | 217..326 | 320..433 | 159 | 37.7 | Plus |
Dpse\GA18178-PA | 368 | GA18178-PA | 250..359 | 320..433 | 158 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12901-PA | 502 | GM12901-PA | 36..502 | 7..459 | 1647 | 87 | Plus |
Dsec\GM13442-PA | 358 | GM13442-PA | 21..110 | 55..144 | 399 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21542-PA | 472 | GD21542-PA | 1..472 | 1..459 | 1670 | 86.4 | Plus |
Dsim\GD17286-PA | 256 | GD17286-PA | 202..241 | 388..427 | 158 | 67.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24240-PA | 454 | GJ24240-PA | 11..166 | 20..202 | 443 | 57.9 | Plus |
Dvir\GJ19028-PA | 332 | GJ19028-PA | 21..110 | 55..144 | 415 | 80 | Plus |
Dvir\GJ24240-PA | 454 | GJ24240-PA | 338..454 | 316..456 | 258 | 46.9 | Plus |
Dvir\GJ19028-PA | 332 | GJ19028-PA | 243..322 | 320..432 | 162 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14152-PA | 461 | GK14152-PA | 1..230 | 1..227 | 661 | 61.4 | Plus |
Dwil\GK25675-PA | 354 | GK25675-PA | 21..110 | 55..144 | 398 | 75.6 | Plus |
Dwil\GK25675-PA | 354 | GK25675-PA | 253..344 | 320..433 | 154 | 36.8 | Plus |
Translation from 222 to 1601
> GH07080.hyp MANRSSQRDREFNRDNTYNNNRDNRDHNRDNRDNRENRSNFQNYRNRDRD RDRQRQVPTEPPFIAYVGNLPKGLVQGDVMKIFSDFEVKNVRLIKDRETD EFKGYGYVEFETLAQLKSALNCNGRIKLDNFSAPLRIDIADHRRQNPGAP SGVGGAPPAGVGHERGGGVGRGGSTGAANGNNPYYQRRNYRRDDSVGSHQ FRRREPRSNSSNHQMSNSSPTQSTTSINYNRTTRGGFNSRVAVGGNGNRY QGGAPRNFNDREDQQSTGSGGFQRNRTYNFNRSMNNSVGGGGAGVGRGGH PQRNFNGNGGGGGFGVVNGGGNYTNFVQNRNRDRRGHYNPNHSGSSGGYN NNGNNTFGGENNHPVHGASESASSGTGPSSSNQFAVRDDDDRPKLVLKPR TVTAPINSLAETKQAALIFGKAKPRDDSSTPVSSPRQDLDAGSSGAPSDH DHDPGLGDN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1340-PC | 459 | CG1340-PC | 1..459 | 1..459 | 2477 | 100 | Plus |
CG1340-PA | 459 | CG1340-PA | 1..459 | 1..459 | 2477 | 100 | Plus |
Rbp2-PC | 358 | CG4429-PC | 4..343 | 38..427 | 619 | 41.4 | Plus |
Rbp2-PD | 388 | CG4429-PD | 4..373 | 38..427 | 609 | 40.7 | Plus |
Rbp2-PA | 325 | CG4429-PA | 4..310 | 38..427 | 582 | 39.4 | Plus |