Clone GH07181 Report

Search the DGRC for GH07181

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:71
Well:81
Vector:pOT2
Associated Gene/TranscriptCG10116-RA
Protein status:GH07181.pep: validated not full length
Preliminary Size:1300
Sequenced Size:930

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10116 2001-01-01 Release 2 assignment
CG10116 2001-12-12 Blastp of sequenced clone
CG10116 2008-04-29 Release 5.5 accounting
CG10116 2008-08-15 Release 5.9 accounting
CG10116 2008-12-18 5.12 accounting

Clone Sequence Records

GH07181.complete Sequence

930 bp (930 high quality bases) assembled on 2001-12-12

GenBank Submission: AY070495

> GH07181.complete
CCGGAGTACAACTAGCTTTGTTTTTGACCCTCACAATAGCAGCGGTCTAC
GGAGAGACTGGATTTTTCCTGAACACACGTCGCGTCCAGGAAAATGCACA
GCCAATCGAGGCGGAAGTGGAGGCTCTGGTAAGGAGCTCCTTCTATGCCG
CAGATCCAACAGTCGTAACTATTCCCCGCTGGCTTGGCAATATCTCCTCG
CCGGAAATCCCCGCGGTGGTTTCTGCCCGACTTCAGCAGCAGGACAGCAA
TATAATCAGTGTTGATCTATCTGAAGCCAATGATGAAACAGAGATCATCG
ACAGCGTGGCCAGTTTGGTGATCGTTCTACACAATCAATTCGATATGCCA
CTGGATCGCATTCTGGTCGTGGGCTTCGCGGAGGGCGCCCATTTGGCAGG
TGGGGTGGCTGCCAAGGTGCAGCAGGACCTGGGTCGCCAGTTGTCGCAGA
TTACAGCTCTTGATCCTTCCTCTGGCGCGGAACTAGACCACAAGCTGTCC
CAAGCCGATGCTGAGTTTGTGGAGGTTGTGCACACAAATGCCGGAGGAGA
GGGCACTTGGGAGCGACTGGGTCATGTGGACTACTATCCCAACGGAGGAC
AAACGCAGCCTGGCTGCACCACGGACTCCTGTTCGCACGAGAGAGCCTTC
GAGCTGCTCGCCGAGATGTGGTCGCCGGAGAATGACTTTGTGAGCGCCCG
TTGTGGTTCGGTGGAGACTTTAAGTGCCTCCAGCTGCCGCTGGTCCACAC
ACAAAATGGGCCAAAAACAGGAGGAGGAGCAGCCTGCCTCAGGCATCTAT
TTCCTGGAGACCCGACAGTCCTCACCCTTCTCCCGTGGAGCATACTTCAT
AAGCTTCCTGTAAGCTGCGGATCCAATAAAAAAGCCAAACGAATAAAGGA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

GH07181.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:49:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG10116-RA 1183 CG10116-RA 169..1074 1..906 4515 99.8 Plus
CG10116.a 896 CG10116.a 28..889 45..906 4295 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:15:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 13446447..13447182 899..164 3620 99.5 Minus
chr3L 24539361 chr3L 13447237..13447355 163..45 595 100 Minus
chr3L 24539361 chr3L 13447414..13447458 45..1 225 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:35:46 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:15:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13456213..13456955 906..164 3700 99.9 Minus
3L 28110227 3L 13457010..13457128 163..45 595 100 Minus
3L 28110227 3L 13457187..13457231 45..1 225 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:15:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 13449313..13450055 906..164 3700 99.8 Minus
3L 28103327 3L 13450110..13450228 163..45 595 100 Minus
3L 28103327 3L 13450287..13450331 45..1 225 100 Minus
Blast to na_te.dros performed on 2019-03-16 15:15:21 has no hits.

GH07181.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:16:14 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 13446447..13447182 164..899 99 <- Minus
chr3L 13447237..13447354 46..163 100 <- Minus
chr3L 13447414..13447458 1..45 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:22:22 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
CG10116-RA 8..870 1..863 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:17:57 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
CG10116-RA 8..870 1..863 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:41:52 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
CG10116-RA 8..870 1..863 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:44:03 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
CG10116-RA 8..870 1..863 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:42:38 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
CG10116-RA 8..870 1..863 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:50:47 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
CG10116-RA 8..906 1..899 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:17:57 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
CG10116-RA 8..906 1..899 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:41:52 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
CG10116-RA 8..906 1..899 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:44:03 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
CG10116-RA 8..906 1..899 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:42:38 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
CG10116-RA 8..906 1..899 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:16:14 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13456220..13456955 164..899 100 <- Minus
3L 13457010..13457127 46..163 100 <- Minus
3L 13457187..13457231 1..45 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:16:14 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13456220..13456955 164..899 100 <- Minus
3L 13457010..13457127 46..163 100 <- Minus
3L 13457187..13457231 1..45 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:16:14 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13456220..13456955 164..899 100 <- Minus
3L 13457010..13457127 46..163 100 <- Minus
3L 13457187..13457231 1..45 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:41:52 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13449320..13450055 164..899 100 <- Minus
arm_3L 13450110..13450227 46..163 100 <- Minus
arm_3L 13450287..13450331 1..45 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:20:17 Download gff for GH07181.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13449320..13450055 164..899 100 <- Minus
3L 13450110..13450227 46..163 100 <- Minus
3L 13450287..13450331 1..45 100   Minus

GH07181.pep Sequence

Translation from 2 to 862

> GH07181.pep
GVQLALFLTLTIAAVYGETGFFLNTRRVQENAQPIEAEVEALVRSSFYAA
DPTVVTIPRWLGNISSPEIPAVVSARLQQQDSNIISVDLSEANDETEIID
SVASLVIVLHNQFDMPLDRILVVGFAEGAHLAGGVAAKVQQDLGRQLSQI
TALDPSSGAELDHKLSQADAEFVEVVHTNAGGEGTWERLGHVDYYPNGGQ
TQPGCTTDSCSHERAFELLAEMWSPENDFVSARCGSVETLSASSCRWSTH
KMGQKQEEEQPASGIYFLETRQSSPFSRGAYFISFL*

GH07181.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:08:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10971-PA 288 GF10971-PA 4..288 1..286 972 66.8 Plus
Dana\GF22964-PA 584 GF22964-PA 71..342 21..279 327 33.6 Plus
Dana\GF22963-PA 338 GF22963-PA 66..337 21..279 295 30 Plus
Dana\GF14403-PA 361 GF14403-PA 64..345 21..279 286 31.5 Plus
Dana\GF22961-PA 336 GF22961-PA 49..334 8..278 278 29.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:08:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13762-PA 288 GG13762-PA 4..288 1..286 1354 92 Plus
Dere\GG12155-PA 338 GG12155-PA 66..337 21..279 303 31 Plus
Dere\GG12238-PA 435 GG12238-PA 140..416 26..276 285 30.7 Plus
Dere\GG11519-PA 341 GG11519-PA 70..337 21..276 284 28.8 Plus
Dere\GG24523-PA 348 GG24523-PA 51..332 21..279 279 30.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:08:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24627-PA 287 GH24627-PA 19..287 13..286 730 56.4 Plus
Dgri\GH16686-PA 287 GH16686-PA 26..287 20..286 710 56 Plus
Dgri\GH18962-PA 414 GH18962-PA 76..347 21..279 316 32.4 Plus
Dgri\GH18956-PA 341 GH18956-PA 70..337 21..276 302 30.7 Plus
Dgri\GH18961-PA 336 GH18961-PA 64..335 21..279 296 29.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG10116-PA 289 CG10116-PA 4..289 1..286 1466 100 Plus
CG6295-PA 338 CG6295-PA 66..337 21..279 276 30.7 Plus
CG6296-PA 676 CG6296-PA 73..344 21..279 271 30.8 Plus
CG18641-PC 369 CG18641-PC 72..353 21..279 263 30.3 Plus
CG4582-PA 432 CG4582-PA 140..413 29..276 262 29.6 Plus
CG6277-PA 341 CG6277-PA 70..337 21..276 259 29.6 Plus
CG6271-PA 341 CG6271-PA 70..337 21..276 252 28.8 Plus
CG17192-PA 337 CG17192-PA 62..335 18..278 250 26.6 Plus
CG5966-PB 436 CG5966-PB 43..298 55..284 248 28.4 Plus
CG5966-PA 540 CG5966-PA 147..402 55..284 248 28.4 Plus
CG7367-PD 358 CG7367-PD 110..351 53..279 243 28.6 Plus
CG7367-PB 358 CG7367-PB 110..351 53..279 243 28.6 Plus
CG7367-PC 389 CG7367-PC 141..382 53..279 243 28.6 Plus
CG34447-PA 389 CG34447-PA 44..316 21..279 241 28.5 Plus
CG34447-PB 389 CG34447-PB 44..316 21..279 241 28.5 Plus
CG5162-PB 411 CG5162-PB 119..373 40..280 236 28.6 Plus
CG5162-PA 411 CG5162-PA 119..373 40..280 236 28.6 Plus
CG18258-PA 468 CG18258-PA 183..456 29..285 236 28.7 Plus
CG6283-PA 339 CG6283-PA 67..337 21..278 235 28.6 Plus
CG17191-PA 337 CG17191-PA 62..335 18..278 234 25.8 Plus
CG5665-PB 376 CG5665-PB 111..360 45..280 234 28.6 Plus
CG14034-PC 338 CG14034-PC 40..316 21..284 229 29.5 Plus
CG14034-PB 338 CG14034-PB 40..316 21..284 229 29.5 Plus
CG6472-PB 389 CG6472-PB 46..331 21..280 227 28.9 Plus
CG34448-PA 344 CG34448-PA 46..323 21..279 226 29 Plus
CG6847-PB 1000 CG6847-PB 251..434 102..265 222 31.3 Plus
CG6847-PA 1000 CG6847-PA 251..434 102..265 222 31.3 Plus
CG5665-PC 395 CG5665-PC 216..379 123..280 217 33.7 Plus
Yp1-PB 439 CG2985-PB 200..414 80..280 211 30.4 Plus
Yp1-PA 439 CG2985-PA 200..414 80..280 211 30.4 Plus
CG13282-PB 484 CG13282-PB 100..356 38..281 209 27.2 Plus
CG13282-PA 484 CG13282-PA 100..356 38..281 209 27.2 Plus
CG6675-PC 386 CG6675-PC 116..384 21..279 200 26.1 Plus
CG6675-PB 390 CG6675-PB 120..388 21..279 200 26.1 Plus
CG1986-PB 404 CG1986-PB 153..345 101..276 199 30.5 Plus
CG1986-PA 404 CG1986-PA 153..345 101..276 199 30.5 Plus
sxe2-PB 387 CG4979-PB 91..360 38..276 198 25.1 Plus
sxe2-PA 387 CG4979-PA 91..360 38..276 198 25.1 Plus
Yp2-PB 442 CG2979-PB 232..413 102..278 196 31 Plus
Yp2-PA 442 CG2979-PA 232..413 102..278 196 31 Plus
CG17292-PD 340 CG17292-PD 61..311 53..279 193 28.9 Plus
CG17292-PC 340 CG17292-PC 61..311 53..279 193 28.9 Plus
CG17292-PB 340 CG17292-PB 61..311 53..279 193 28.9 Plus
CG17292-PA 340 CG17292-PA 61..311 53..279 193 28.9 Plus
Yp3-PB 420 CG11129-PB 153..402 24..278 170 27.5 Plus
Yp3-PA 420 CG11129-PA 153..402 24..278 170 27.5 Plus
CG10357-PC 321 CG10357-PC 106..316 99..279 167 27 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11372-PA 289 GI11372-PA 7..289 6..286 723 52.8 Plus
Dmoj\GI23291-PA 337 GI23291-PA 65..336 21..279 309 30.7 Plus
Dmoj\GI23292-PA 474 GI23292-PA 75..350 21..283 307 33.3 Plus
Dmoj\GI23284-PA 341 GI23284-PA 70..337 21..276 288 29.6 Plus
Dmoj\GI23290-PA 339 GI23290-PA 67..337 21..278 282 31.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20792-PA 288 GL20792-PA 21..288 17..286 974 67.4 Plus
Dper\GL23624-PA 341 GL23624-PA 70..337 21..276 292 30.3 Plus
Dper\GL26469-PA 348 GL26469-PA 51..332 21..279 282 31.1 Plus
Dper\GL23622-PA 341 GL23622-PA 70..337 21..276 281 30.3 Plus
Dper\GL23626-PA 339 GL23626-PA 67..337 21..278 276 29.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:08:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10083-PA 288 GA10083-PA 21..288 17..286 975 67.4 Plus
Dpse\GA18274-PA 461 GA18274-PA 159..447 11..276 289 30.8 Plus
Dpse\GA19482-PA 341 GA19482-PA 70..337 21..276 283 29.6 Plus
Dpse\GA15027-PA 348 GA15027-PA 51..332 21..279 282 31.1 Plus
Dpse\GA26666-PA 341 GA26666-PA 70..337 21..276 281 30.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:08:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24588-PA 288 GM24588-PA 4..288 1..286 1437 96.2 Plus
Dsec\GM10148-PA 338 GM10148-PA 66..337 21..279 291 30 Plus
Dsec\GM10142-PA 341 GM10142-PA 70..337 21..276 286 29.6 Plus
Dsec\GM18230-PA 348 GM18230-PA 51..332 21..279 279 30.8 Plus
Dsec\GM10237-PA 437 GM10237-PA 140..413 29..276 275 31.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:08:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12656-PA 288 GD12656-PA 4..288 1..286 1468 97.6 Plus
Dsim\GD18105-PA 338 GD18105-PA 66..337 21..279 295 30.3 Plus
Dsim\GD18101-PA 341 GD18101-PA 70..337 21..276 283 29.2 Plus
Dsim\GD18106-PA 548 GD18106-PA 73..344 21..279 280 30.8 Plus
Dsim\GD18100-PA 341 GD18100-PA 70..337 21..276 271 28.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:08:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11626-PA 287 GJ11626-PA 18..287 20..286 730 53.8 Plus
Dvir\GJ24147-PA 425 GJ24147-PA 75..346 21..279 317 33.5 Plus
Dvir\GJ24145-PA 339 GJ24145-PA 67..337 21..278 300 31.8 Plus
Dvir\GJ11509-PA 289 GJ11509-PA 30..265 54..276 293 33.6 Plus
Dvir\GJ24146-PA 336 GJ24146-PA 64..335 21..279 291 29.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:08:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17107-PA 299 GK17107-PA 9..299 2..286 885 56.8 Plus
Dwil\GK12042-PA 342 GK12042-PA 71..338 21..276 306 30.3 Plus
Dwil\GK12045-PA 340 GK12045-PA 68..338 21..278 294 30.4 Plus
Dwil\GK12049-PA 335 GK12049-PA 60..329 21..276 291 30.5 Plus
Dwil\GK12050-PA 337 GK12050-PA 65..336 21..279 284 31.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:08:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20059-PA 288 GE20059-PA 4..288 1..286 1343 90.6 Plus
Dyak\GE10600-PA 338 GE10600-PA 66..337 21..279 304 31 Plus
Dyak\GE10688-PA 444 GE10688-PA 129..423 11..276 286 30.4 Plus
Dyak\GE15114-PA 348 GE15114-PA 51..332 21..279 279 30.8 Plus
Dyak\GE10595-PA 341 GE10595-PA 70..337 21..276 271 30.3 Plus

GH07181.hyp Sequence

Translation from 2 to 862

> GH07181.hyp
GVQLALFLTLTIAAVYGETGFFLNTRRVQENAQPIEAEVEALVRSSFYAA
DPTVVTIPRWLGNISSPEIPAVVSARLQQQDSNIISVDLSEANDETEIID
SVASLVIVLHNQFDMPLDRILVVGFAEGAHLAGGVAAKVQQDLGRQLSQI
TALDPSSGAELDHKLSQADAEFVEVVHTNAGGEGTWERLGHVDYYPNGGQ
TQPGCTTDSCSHERAFELLAEMWSPENDFVSARCGSVETLSASSCRWSTH
KMGQKQEEEQPASGIYFLETRQSSPFSRGAYFISFL*

GH07181.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:25:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG10116-PA 289 CG10116-PA 4..289 1..286 1466 100 Plus
CG6295-PA 338 CG6295-PA 66..337 21..279 276 30.7 Plus
CG6296-PA 676 CG6296-PA 73..344 21..279 271 30.8 Plus
CG18641-PC 369 CG18641-PC 72..353 21..279 263 30.3 Plus
CG4582-PA 432 CG4582-PA 140..413 29..276 262 29.6 Plus