BDGP Sequence Production Resources |
Search the DGRC for GH07295
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 72 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | Yippee-RA |
Protein status: | GH07295.pep: gold |
Sequenced Size: | 977 |
Gene | Date | Evidence |
---|---|---|
Yippee-RA | 2010-01-15 | Manual selection by Sue Celniker |
977 bp assembled on 2010-02-11
GenBank Submission: BT120317.1
> GH07295.complete CCTGACCAGGATTCCCCAAGTGGAGTCATCTTCAAACAGCTGTGAAAAAG GAACAAAGGAGGAGCACAACAAACACACGCATACACACGTACGTACTCGG GAGAGCGAGCGAGACGGGGTGCGACCAGAAGAGCGAGTGAGGTAGAGGAG GGAGCACAATGGGACGCATTTTCTTGGAACATCTTGGGGGTCTGAAACTC TTCAATTGCGCCCAATGCCACACGAACCTGACCAACCGCAGTCAATTGAT CAGTACCCGATTCACAGGCGCAACAGGACGCGCCTATCTGTTTAAGCGTG TGGTCAACCTGACCTTCAGCAACATCCAGGAACGGGTCATGCTCACGGGT CGCCACATGGTGCGCGACGTTATGTGCAAGAATTGTGGAGCCAAACTTGG CTGGATGTACGAGTTCGCCACCGAAGAGTCACAAAAATACAAGGAGGGTC GCGTTATCCTGGAGTACGCCCTGATCACAGAGGCAGAGGGCTTTCCGTCG GAGGCCGCCACCACGAGTCATTGAGCCGATTGAATATACAGCCGGAAAAC GGGAACCACGCATTGGCGAACCTTGTGTAGCCCTAAGTATTGAGTAGATG GCCACAGGCGATGGCCTCTATGCATTAGACCTAGATTAGAGATCGCCGTA GTCGGCTCCGGTGTTCGGGATACCGAAGACCGATATATCGGTTGCACATC CGCCACGGAGCACATGCGACTACGGCCCTGTCTTAACGTGACTTAAACGT AATTGTAGGCACATCTAGCACGTAAGCAGCTGCGGCGCCCAATTCTACCA TTTAAATGTCATGAGGCTGAAGTGCTAAAACGAAAAAGATGGGCTGCTAC TCAGCTGGAACATATTCGAAACTGATGATCCACACTTGTCTTTTTCAAAC AAGATCTCTAGGCCGTAATCAATCAGCAATAAAGTACCACAATAATCGAA TAGTAGATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13276685..13277206 | 958..437 | 2595 | 99.8 | Minus |
chrX | 22417052 | chrX | 13277589..13277817 | 277..49 | 1145 | 100 | Minus |
chrX | 22417052 | chrX | 13277364..13277527 | 436..273 | 820 | 100 | Minus |
chrX | 22417052 | chrX | 13277960..13278010 | 51..1 | 240 | 98 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 13385908..13386431 | 960..437 | 2620 | 100 | Minus |
X | 23542271 | X | 13386814..13387042 | 277..49 | 1145 | 100 | Minus |
X | 23542271 | X | 13386589..13386752 | 436..273 | 820 | 100 | Minus |
X | 23542271 | X | 13387185..13387235 | 51..1 | 255 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13394006..13394529 | 960..437 | 2620 | 100 | Minus |
X | 23527363 | X | 13394912..13395140 | 277..49 | 1145 | 100 | Minus |
X | 23527363 | X | 13394687..13394850 | 436..273 | 820 | 100 | Minus |
X | 23527363 | X | 13395283..13395333 | 51..1 | 255 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13276685..13277206 | 437..958 | 99 | <- | Minus |
chrX | 13277364..13277523 | 277..436 | 100 | <- | Minus |
chrX | 13277590..13277815 | 51..276 | 100 | <- | Minus |
chrX | 13277961..13278010 | 1..50 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RA | 1..366 | 159..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RA | 1..366 | 159..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RA | 1..366 | 159..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RA | 1..366 | 159..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RA | 160..1113 | 1..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RA | 160..1113 | 1..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RA | 160..1113 | 1..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yippee-RA | 183..1136 | 1..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13385910..13386431 | 437..958 | 100 | <- | Minus |
X | 13386589..13386748 | 277..436 | 100 | <- | Minus |
X | 13386815..13387040 | 51..276 | 100 | <- | Minus |
X | 13387186..13387235 | 1..50 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13385910..13386431 | 437..958 | 100 | <- | Minus |
X | 13386589..13386748 | 277..436 | 100 | <- | Minus |
X | 13386815..13387040 | 51..276 | 100 | <- | Minus |
X | 13387186..13387235 | 1..50 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13385910..13386431 | 437..958 | 100 | <- | Minus |
X | 13386589..13386748 | 277..436 | 100 | <- | Minus |
X | 13386815..13387040 | 51..276 | 100 | <- | Minus |
X | 13387186..13387235 | 1..50 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13279943..13280464 | 437..958 | 100 | <- | Minus |
arm_X | 13280622..13280781 | 277..436 | 100 | <- | Minus |
arm_X | 13280848..13281073 | 51..276 | 100 | <- | Minus |
arm_X | 13281219..13281268 | 1..50 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13394008..13394529 | 437..958 | 100 | <- | Minus |
X | 13394687..13394846 | 277..436 | 100 | <- | Minus |
X | 13394913..13395138 | 51..276 | 100 | <- | Minus |
X | 13395284..13395333 | 1..50 | 100 | Minus |
Translation from 158 to 523
> GH07295.pep MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVN LTFSNIQERVMLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKYKEGRVI LEYALITEAEGFPSEAATTSH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19499-PA | 121 | GF19499-PA | 1..121 | 1..121 | 638 | 98.3 | Plus |
Dana\GF19108-PA | 114 | GF19108-PA | 14..113 | 13..112 | 249 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19506-PA | 121 | GG19506-PA | 1..121 | 1..121 | 646 | 100 | Plus |
Dere\GG18944-PA | 114 | GG18944-PA | 14..113 | 13..112 | 249 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24471-PA | 121 | GH24471-PA | 1..121 | 1..121 | 612 | 95 | Plus |
Dgri\GH24074-PA | 114 | GH24074-PA | 14..113 | 13..112 | 249 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Yippee-PA | 121 | CG1989-PA | 1..121 | 1..121 | 635 | 100 | Plus |
Yippee-PB | 110 | CG1989-PB | 1..94 | 1..94 | 496 | 98.9 | Plus |
CG15309-PE | 114 | CG15309-PE | 14..113 | 13..112 | 244 | 45 | Plus |
CG15309-PD | 114 | CG15309-PD | 14..113 | 13..112 | 244 | 45 | Plus |
CG15309-PC | 114 | CG15309-PC | 14..113 | 13..112 | 244 | 45 | Plus |
CG15309-PB | 114 | CG15309-PB | 14..113 | 13..112 | 244 | 45 | Plus |
CG15309-PA | 114 | CG15309-PA | 14..113 | 13..112 | 244 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15336-PA | 121 | GI15336-PA | 1..121 | 1..121 | 619 | 95.9 | Plus |
Dmoj\GI15523-PA | 114 | GI15523-PA | 14..113 | 13..112 | 249 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26724-PA | 121 | GL26724-PA | 1..121 | 1..121 | 632 | 96.7 | Plus |
Dper\GL22456-PA | 114 | GL22456-PA | 14..113 | 13..112 | 246 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15174-PA | 121 | GA15174-PA | 1..121 | 1..121 | 632 | 96.7 | Plus |
Dpse\GA27919-PA | 114 | GA27919-PA | 14..113 | 13..112 | 249 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11494-PA | 121 | GM11494-PA | 1..121 | 1..121 | 646 | 100 | Plus |
Dsec\GM11334-PA | 114 | GM11334-PA | 14..113 | 13..112 | 249 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15888-PA | 121 | GD15888-PA | 1..121 | 1..121 | 646 | 100 | Plus |
Dsim\GD24655-PA | 114 | GD24655-PA | 14..113 | 13..112 | 249 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14773-PA | 121 | GJ14773-PA | 1..121 | 1..121 | 619 | 95.9 | Plus |
Dvir\GJ19280-PA | 114 | GJ19280-PA | 14..113 | 13..112 | 249 | 45 | Plus |
Translation from 158 to 523
> GH07295.hyp MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVN LTFSNIQERVMLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKYKEGRVI LEYALITEAEGFPSEAATTSH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Yippee-PA | 121 | CG1989-PA | 1..121 | 1..121 | 635 | 100 | Plus |
Yippee-PB | 110 | CG1989-PB | 1..94 | 1..94 | 496 | 98.9 | Plus |
CG15309-PE | 114 | CG15309-PE | 14..113 | 13..112 | 244 | 45 | Plus |
CG15309-PD | 114 | CG15309-PD | 14..113 | 13..112 | 244 | 45 | Plus |
CG15309-PC | 114 | CG15309-PC | 14..113 | 13..112 | 244 | 45 | Plus |