Clone GH07317 Report

Search the DGRC for GH07317

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:73
Well:17
Vector:pOT2
Associated Gene/TranscriptIpk1-RA
Protein status:GH07317.pep: gold
Preliminary Size:2633
Sequenced Size:2476

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15228 2001-01-01 Release 2 assignment
CG15229 2001-01-01 Release 2 assignment
CG15230 2001-01-01 Release 2 assignment
CG30295 2001-09-19 Blastp of sequenced clone
CG30295 2003-01-01 Sim4 clustering to Release 3
Ipk1 2008-04-29 Release 5.5 accounting
Ipk1 2008-08-15 Release 5.9 accounting
Ipk1 2008-12-18 5.12 accounting

Clone Sequence Records

GH07317.complete Sequence

2476 bp (2476 high quality bases) assembled on 2001-09-19

GenBank Submission: AY061821

> GH07317.complete
ATCTCAGCTGATCAGCTGTTCGAAAAACGAAAATAAACATTTTAATTTAA
AAGCCGGCATACAATCAACAAAATTGTGAAGGATTCTAGCTGTTAAAGAG
CCTGGCGACCTGACTTTCAAACCGGCGACGACTTCCCGGCTGCTGCATCT
TATCGCCGGCCAATAAATGTGCATAAATGCGCCCACGACAGGACGAGTAG
GGAGCAGCGAGGAGTGGTGGAGCAGTGAAACAGAAACAGCCGCAGAAACA
GAAACAATAACAATAGTAAAGCCGCAGGACTCGACCACAACAAGCCACAA
TCGGCAATCATCAACACTGGCGCGCCGCAGACCGAGCAGAAGGGGTCAGA
GGTCGGTGGTCGGTGGTCGGTGGTCGGAGGAGCAGGCGCTTGCTGACGGC
GCCAGTTGCATTTTGACAACGACAACGAACCAAAAACACCCGCGCACAGG
CCATGACAGCCGAACGAGGACCCCGCTCCCCGGGAACGGGGCAAAAACTA
AGGCTTAGAGCCACTGAGCCAATGCCACAGTGGACGGCCAAAAATCTGCA
CGCCCTGCTGGATCTGCCCGCGGCGATGGAACTGCGCCAAATTGAGTTGA
TCTATCGGGCGGAGGGTAATGCAAATTTGGTGCTCGCCCTGCCGCAATTT
AAAAAAGTTTTACGTTTGCCAAAAATGATATCCAGCAGACTGCGCCAGGC
GGCGCACCAGCGGCACGAGCTGGCGGATGAGGTTGCTCGGCCGGAAGGGC
AGCGTGTCTCATCCGAAAGAGCTGGAACTGAAAATGCTGGCGACTTGACA
ATGCCGGATTTTATGGCTTATATCGGGATAATGCGCCGTCTATTAGGAAA
TGAGTTTGTCTGCGGAGCGGATATTGTTGCCATACCAAAGGAAGACGATA
GATTCTGGATAAACGAGCATATACGCGCCCAAAGACCGGTTTCGCGTCTG
GATAAGGAATTTGTGGGGCCATTCGGCCTGCTGCTGCCAGATGTGACCCA
ATTGCCTGCCACGTTCGATGTTTTACTTGCCAATTTACAGGCAAAGGGCA
CAACAGGAGATGAAAGTGGAGCTGCAGCGGGCGTAGGAGATGGCGGTGGC
GTTGGCCGTGGAGCAGGAACAAGGACGAAAAACAGGAGCGCTGTCCGTCG
TCTGGGCGATACATATGCCATCGAAATAAAACCCAAACAAGGCTGGCTTC
AGTTGGCAAGTGATGTCAACGATTTATTTGATTTAATGCCATCGGGGGCA
GTGACAAAGCCAAAGGAGACGACCTGCAATCAGGAGGAGAATGAGCCCTC
TGCCCGGGACAAGTGCTGGTGTCGCTTTTGCAGCATGCAACTGCTGAAGA
TGCACAATGGGAAAATCAAACGTTTGGGCCACTACTGTCCGCTGGATCTA
TTTTCCGGTACACCCAGTCGTATGCTCGATGCCTTGGATGCACTTCTCGC
CTGCCCGCAAAATAATTTACGTGTGTTTCAGAACAGCAATTTAATTTATG
GCGATCACGCGAATTCGATTTCCTTCGATGAATTGAGCTCGCGTGTCTTT
CCCGGTGAAATTATGGTGCTTATAAAACATTTGCTGGTGGCCTGTCTGCT
AAGGGAATACGAGCACCCGGAATCCAAACGAGCAGAGGGCTCCAATCAGA
GCCAGAAGCAGCAGCAGGAGCAGCCGGAGCCGGAGCAGCTGAATCAGAGT
CGCGTTTCTATTGCGGCGACGGAGACAAAGGCCGGAGCTGCTGGAATTGG
CGCCGCTAATGTTGTCCTGCCACTCGGAGGCAGGGCAGCCGCCCCTGTTG
TCACTGCCGGTCAATCCTCGACGCGGACAAGAGCAGCTGCTGCAACAGCC
ACGACCCAAAGGTACACAAAAGTGGCCAGAGTGGAAACAACAATAACTAG
ACAGGCAGCCACCTCGATGGCAGCAGGACCAGCATCGAGCAGCCAACTGT
CCGGCAATGTGTTGGCAACGGCAACGGCAACGGCAACGGCTACGGCAATG
GCAACTTCAGGTCGAACGGAAACAAAAACGGAACCGGAAACTCCGGCTGA
GGCTGCTAGTACGACAAGTCGCAACGTGAATCAGAATGAAAGCCAAAAAC
TGAATCGAAATGAGCCTGCGAATCAAACTCAAGCGCAAAACAACAAAACG
GAAATATTTCGCTTACCAAAAAATTGTGTGCTGCAAAAAATTTTGAATTT
GCAATTGCTGGTAAAGGTAAGCCAACCAATCAAACTGCTGCCCAAACTAC
TCAGTCTCTGTCCGTTTGGGTTTGTTTATTCTGCCTGCCCCCCAGAGAAC
CTTGGCAATTGCAGATAGTTCGAGTTGGGCTCTGATACCCTAATAGGGGT
ATAGCCATTTTGTGGATCACTTTGTTCACACACACTTAGTCTTAGTAATT
GATTTATTGTATAAAGCTGGTTATATTACTTTGTAATATATCTTTAAGCT
ACTTAACAAAAAAAAAAAAAAAAAAA

GH07317.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:46:43
Subject Length Description Subject Range Query Range Score Percent Strand
Ipk1-RA 2543 Ipk1-RA 81..2537 1..2457 12285 100 Plus
Ipk1-RB 3011 Ipk1-RB 81..2296 1..2216 11080 100 Plus
Ipk1.a 2990 Ipk1.a 81..2296 1..2216 11080 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:24:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 16764127..16764966 1612..2457 4090 99.2 Plus
chr2R 21145070 chr2R 16757840..16758515 97..786 3160 97.5 Plus
chr2R 21145070 chr2R 16761741..16762056 1034..1349 1565 99.7 Plus
chr2R 21145070 chr2R 16759049..16759202 786..939 770 100 Plus
chr2R 21145070 chr2R 16762984..16763131 1408..1555 740 100 Plus
chr2R 21145070 chr2R 16760160..16760262 939..1041 515 100 Plus
chr2R 21145070 chr2R 16757330..16757427 1..98 490 100 Plus
chr2R 21145070 chr2R 16762113..16762173 1348..1408 305 100 Plus
chr2R 21145070 chr2R 16763764..16763822 1555..1613 295 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:36:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:24:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20877617..20878462 1612..2457 4230 100 Plus
2R 25286936 2R 20871316..20872005 97..786 3450 100 Plus
2R 25286936 2R 20875231..20875546 1034..1349 1565 99.7 Plus
2R 25286936 2R 20872539..20872692 786..939 770 100 Plus
2R 25286936 2R 20876474..20876621 1408..1555 740 100 Plus
2R 25286936 2R 20873650..20873752 939..1041 515 100 Plus
2R 25286936 2R 20870806..20870903 1..98 490 100 Plus
2R 25286936 2R 20875603..20875663 1348..1408 305 100 Plus
2R 25286936 2R 20877254..20877312 1555..1613 295 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:06:54
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 20878816..20879661 1612..2457 4230 100 Plus
2R 25260384 2R 20872515..20873204 97..786 3450 100 Plus
2R 25260384 2R 20876430..20876745 1034..1349 1565 99.6 Plus
2R 25260384 2R 20873738..20873891 786..939 770 100 Plus
2R 25260384 2R 20877673..20877820 1408..1555 740 100 Plus
2R 25260384 2R 20874849..20874951 939..1041 515 100 Plus
2R 25260384 2R 20872005..20872102 1..98 490 100 Plus
2R 25260384 2R 20876802..20876862 1348..1408 305 100 Plus
2R 25260384 2R 20878453..20878511 1555..1613 295 100 Plus
Blast to na_te.dros performed 2019-03-16 11:24:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6826..7166 1827..2153 138 55.7 Plus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 2172..2266 231..322 116 62.5 Plus

GH07317.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:24:58 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 16757330..16757427 1..98 100 -> Plus
chr2R 16757842..16758515 99..786 95 -> Plus
chr2R 16759050..16759202 787..939 100 -> Plus
chr2R 16760161..16760261 940..1040 100 -> Plus
chr2R 16761748..16762056 1041..1349 100 -> Plus
chr2R 16762115..16762173 1350..1408 100 -> Plus
chr2R 16762985..16763131 1409..1555 100 -> Plus
chr2R 16763765..16763822 1556..1613 100 -> Plus
chr2R 16764129..16764966 1614..2457 94   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:23:01 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk1-RA 1..1866 453..2318 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:41:05 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk1-RA 1..1866 453..2318 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:29:51 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk1-RA 1..1866 453..2318 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:19:23 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk1-RA 1..1866 453..2318 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:15:46 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk1-RA 1..1866 453..2318 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:46:55 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk1-RA 1..2457 1..2457 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:41:05 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk1-RA 1..2457 1..2457 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:29:51 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk1-RA 16..2472 1..2457 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:19:23 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk1-RA 1..2457 1..2457 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:15:46 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk1-RA 16..2472 1..2457 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:24:58 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20870806..20870903 1..98 100 -> Plus
2R 20871318..20872005 99..786 100 -> Plus
2R 20872540..20872692 787..939 100 -> Plus
2R 20873651..20873751 940..1040 100 -> Plus
2R 20875238..20875546 1041..1349 100 -> Plus
2R 20875605..20875663 1350..1408 100 -> Plus
2R 20876475..20876621 1409..1555 100 -> Plus
2R 20877255..20877312 1556..1613 100 -> Plus
2R 20877619..20878462 1614..2457 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:24:58 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20870806..20870903 1..98 100 -> Plus
2R 20871318..20872005 99..786 100 -> Plus
2R 20872540..20872692 787..939 100 -> Plus
2R 20873651..20873751 940..1040 100 -> Plus
2R 20875238..20875546 1041..1349 100 -> Plus
2R 20875605..20875663 1350..1408 100 -> Plus
2R 20876475..20876621 1409..1555 100 -> Plus
2R 20877255..20877312 1556..1613 100 -> Plus
2R 20877619..20878462 1614..2457 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:24:58 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20870806..20870903 1..98 100 -> Plus
2R 20871318..20872005 99..786 100 -> Plus
2R 20872540..20872692 787..939 100 -> Plus
2R 20873651..20873751 940..1040 100 -> Plus
2R 20875238..20875546 1041..1349 100 -> Plus
2R 20875605..20875663 1350..1408 100 -> Plus
2R 20876475..20876621 1409..1555 100 -> Plus
2R 20877255..20877312 1556..1613 100 -> Plus
2R 20877619..20878462 1614..2457 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:29:51 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16762743..16763051 1041..1349 100 -> Plus
arm_2R 16763110..16763168 1350..1408 100 -> Plus
arm_2R 16763980..16764126 1409..1555 100 -> Plus
arm_2R 16764760..16764817 1556..1613 100 -> Plus
arm_2R 16758311..16758408 1..98 100 -> Plus
arm_2R 16758823..16759510 99..786 100 -> Plus
arm_2R 16760045..16760197 787..939 100 -> Plus
arm_2R 16761156..16761256 940..1040 100 -> Plus
arm_2R 16765124..16765967 1614..2457 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:54:16 Download gff for GH07317.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20877674..20877820 1409..1555 100 -> Plus
2R 20878454..20878511 1556..1613 100 -> Plus
2R 20872517..20873204 99..786 100 -> Plus
2R 20873739..20873891 787..939 100 -> Plus
2R 20874850..20874950 940..1040 100 -> Plus
2R 20876437..20876745 1041..1349 100 -> Plus
2R 20876804..20876862 1350..1408 100 -> Plus
2R 20878818..20879661 1614..2457 100   Plus
2R 20872005..20872102 1..98 100 -> Plus

GH07317.hyp Sequence

Translation from 452 to 2317

> GH07317.hyp
MTAERGPRSPGTGQKLRLRATEPMPQWTAKNLHALLDLPAAMELRQIELI
YRAEGNANLVLALPQFKKVLRLPKMISSRLRQAAHQRHELADEVARPEGQ
RVSSERAGTENAGDLTMPDFMAYIGIMRRLLGNEFVCGADIVAIPKEDDR
FWINEHIRAQRPVSRLDKEFVGPFGLLLPDVTQLPATFDVLLANLQAKGT
TGDESGAAAGVGDGGGVGRGAGTRTKNRSAVRRLGDTYAIEIKPKQGWLQ
LASDVNDLFDLMPSGAVTKPKETTCNQEENEPSARDKCWCRFCSMQLLKM
HNGKIKRLGHYCPLDLFSGTPSRMLDALDALLACPQNNLRVFQNSNLIYG
DHANSISFDELSSRVFPGEIMVLIKHLLVACLLREYEHPESKRAEGSNQS
QKQQQEQPEPEQLNQSRVSIAATETKAGAAGIGAANVVLPLGGRAAAPVV
TAGQSSTRTRAAAATATTQRYTKVARVETTITRQAATSMAAGPASSSQLS
GNVLATATATATATAMATSGRTETKTEPETPAEAASTTSRNVNQNESQKL
NRNEPANQTQAQNNKTEIFRLPKNCVLQKILNLQLLVKVSQPIKLLPKLL
SLCPFGFVYSACPPENLGNCR*

GH07317.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:26:57
Subject Length Description Subject Range Query Range Score Percent Strand
Ipk1-PA 621 CG30295-PA 1..621 1..621 3178 100 Plus
Ipk1-PC 715 CG30295-PC 1..588 1..588 2996 100 Plus
Ipk1-PB 716 CG30295-PB 1..588 1..588 2996 100 Plus
Ipk1-PD 576 CG30295-PD 57..448 197..588 1992 100 Plus

GH07317.pep Sequence

Translation from 452 to 2317

> GH07317.pep
MTAERGPRSPGTGQKLRLRATEPMPQWTAKNLHALLDLPAAMELRQIELI
YRAEGNANLVLALPQFKKVLRLPKMISSRLRQAAHQRHELADEVARPEGQ
RVSSERAGTENAGDLTMPDFMAYIGIMRRLLGNEFVCGADIVAIPKEDDR
FWINEHIRAQRPVSRLDKEFVGPFGLLLPDVTQLPATFDVLLANLQAKGT
TGDESGAAAGVGDGGGVGRGAGTRTKNRSAVRRLGDTYAIEIKPKQGWLQ
LASDVNDLFDLMPSGAVTKPKETTCNQEENEPSARDKCWCRFCSMQLLKM
HNGKIKRLGHYCPLDLFSGTPSRMLDALDALLACPQNNLRVFQNSNLIYG
DHANSISFDELSSRVFPGEIMVLIKHLLVACLLREYEHPESKRAEGSNQS
QKQQQEQPEPEQLNQSRVSIAATETKAGAAGIGAANVVLPLGGRAAAPVV
TAGQSSTRTRAAAATATTQRYTKVARVETTITRQAATSMAAGPASSSQLS
GNVLATATATATATAMATSGRTETKTEPETPAEAASTTSRNVNQNESQKL
NRNEPANQTQAQNNKTEIFRLPKNCVLQKILNLQLLVKVSQPIKLLPKLL
SLCPFGFVYSACPPENLGNCR*

GH07317.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:16:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12204-PA 711 GF12204-PA 16..597 15..611 1731 63.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:16:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22064-PA 604 GG22064-PA 1..593 1..618 2512 85.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:16:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22003-PA 644 GH22003-PA 27..393 28..395 1250 66.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:35
Subject Length Description Subject Range Query Range Score Percent Strand
Ipk1-PA 621 CG30295-PA 1..621 1..621 3178 100 Plus
Ipk1-PC 715 CG30295-PC 1..588 1..588 2996 100 Plus
Ipk1-PB 716 CG30295-PB 1..588 1..588 2996 100 Plus
Ipk1-PD 576 CG30295-PD 57..448 197..588 1992 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:16:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19706-PA 838 GI19706-PA 30..330 29..299 802 59.5 Plus
Dmoj\GI19706-PA 838 GI19706-PA 362..720 231..588 654 45.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17056-PA 565 GL17056-PA 20..565 26..590 1537 63.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:16:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15757-PA 565 GA15757-PA 20..565 26..590 1503 61.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15781-PA 714 GM15781-PA 1..586 1..588 2626 95.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11544-PA 667 GD11544-PA 1..539 1..541 2744 96.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:16:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17425-PA 702 GJ17425-PA 20..581 29..588 1313 53 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:16:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23328-PA 648 GK23328-PA 11..464 29..477 1351 59.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:16:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12145-PA 614 GE12145-PA 16..614 11..621 2460 84.5 Plus