BDGP Sequence Production Resources |
Search the DGRC for GH07340
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 73 |
Well: | 40 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7556-RA |
Protein status: | GH07340.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1995 |
Gene | Date | Evidence |
---|---|---|
CG7556 | 2001-01-01 | Release 2 assignment |
CG7556 | 2002-06-07 | Blastp of sequenced clone |
CG7556 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7556 | 2008-04-29 | Release 5.5 accounting |
CG7556 | 2008-08-15 | Release 5.9 accounting |
CG7556 | 2008-12-18 | 5.12 accounting |
1995 bp (1995 high quality bases) assembled on 2002-06-07
GenBank Submission: AY119483
> GH07340.complete TTTGCTTGCGTGTGTGTGTATTTGTGGTGCGTGCGTGGGTCTGGCGCATT AAATTTGGATTTTACTCCGATTTGGACCTGACCTGGATTCGGAACTCGGA CCACGATGATGATGCGACCGGAGCTGACGCTGGCCGGCCTCCTGCTGCTC TGCGCCACTGGCGCCAGCGCCTGGCACTCGGAGGAACTGGAGATCTTTGA CTTGGTCGAGGAGGTAAACCGCAACTTCTACGAGTTCATGGGCATCAACC AAACGGCAACGGGCGCCGAGGTGAAGCGCGCCTTCCGCACCCTGTCCATT GTCCTGCATCCGGACAAGAATCCGGCCGAGGATGCCAACATCCAGTTCCG CAACCTCGTTTCCATCTACGAGGTTCTCAAAGATCCGTCGCGCCGAGAGA AGTACGACCGGGTACTGAAGGAGGGCATGCCCAACTGGAAGTCTGCCCTC TACTATTACCGACGTATGCGCAAGATCGGGCTCTATGAGGGCGCCTTTAT CCTCTTCCTGATAACCACCGTGGGCCAGTATCTATTCGCCTGGGCGGCCT ACCTCGAGAAGAAGTACACCGCCGAACAGGTCTTTGGCACCAAGCTGAAG AAGCTGCAGAAGAAGAACAAGAACATCGACATGGACGTGATCCTTAGCGA GATACCGATGCCCTCGCTACTCAACACCCTGCCCATCCAGATCCCCTTGG CCCTGTGGAACCTGCCGCGCACCATCAAGAACGGATTCAGCAAGGCCAAC GAGCTAAAGGAACTCGCCCTGGAGAAGCGCAGGCAGGAACTGGAGGCCGT CCGTCGTCAGGAGGAACTGGAACGGGAGGCCGAGGAGCAGGCGCGCCTTC GCAAGGAGCACAAGGAGAATCTGCGGAAGCGCAAGCAGAACAGCAAGGCT CCAGAGAAGACCGAGGAAGAATTGCGCGGCTATTCGCAGATTCAGACTCG CGAATTGACAGATGACGATGCAGTTCGTCCAGCTTCCCAGAAGAGCACGG TGAGCGGCGGCTTCTGGACTGACGAGGATCTTACCGAGCTGATTCGCTTG GTAAAAAAGTATCCTGGCGGAGCTGGCAGCCGCTGGAACACTATCGCCGA GTCGATGAACCGCAGCGTTCAGGAGGTGACCTTTATGGCGGCCAAGATGA AGGAGAATGGCTACCGCATTCCCGGCCAAACTGACAGCGTGGCCGAGGCT CTCGTCCAGGAGTCCCAGCAGGCGCAGCGTAAGGAAAAAGTGAAGAAGGC AGCCGCAAATGCAGGAGCTTCAGCCGAGAAGAGCATGCTAATTCCGGAGA CCAACTGGACGCAAGAGCAGCAGCGCGCCCTGGAGGCGGCGATAGTCAAG TACCGGAAGACGGCCGGCGGAGACCGTTGGCAGAAGATCGCCAACAGTGT GCCGGAGAAGACCAAGGAGGAGTGCCTGGTGCGCTACAAGTATCTCTGCG AGCTGGTCAAGACGCAGAAGCGGGCCGAGGAGGAGGCCAACGAGCCGGAC GAGGATGCGGCCGCCATCGAGGAAGAGCTCCCCGAGGAGGAGCCCCTTGC GCCGCCAGAACCGGAAGTGGCGCCAGCCGCCAAGAAGCTCAGCAAGCGGG AGCAGCGTCGCCGTAAGCGGGACTTATCCAGCGGCGAGGACTCGGACGAT GCATATCAGTACGAGATCAGTTAGTCGGAAACCCGGCTCCCGCTCTGTCC TCCTGCTGCGGCATCTCCTCGCGTGGCTCACAACTAGATGTAATTGAATT TTTTTATACTTTGCATTAAAGACTCTCTGGCATAGCATTTTGGACCTTGC CAATCCTAATCCGCGGCCCGATCCTCTGCCCCTTCCCTGACCTTCTGTTT CCATCACCGTGTGTAGCGCTTATCTTATGTTTTGTACATAATTTTATATT GTAAACATCTAAATGTCGATTAATTCCTTTGCTAAGTAAACGAAATGTAA GAGGAAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 19065881..19066845 | 1959..992 | 4715 | 99.4 | Minus |
chrX | 22417052 | chrX | 19067876..19068668 | 793..1 | 3860 | 99.1 | Minus |
chrX | 22417052 | chrX | 19066925..19067132 | 993..786 | 1025 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 19176995..19177964 | 1961..992 | 4835 | 99.9 | Minus |
X | 23542271 | X | 19178992..19179784 | 793..1 | 3935 | 99.7 | Minus |
X | 23542271 | X | 19178040..19178247 | 993..786 | 1040 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 19185093..19186062 | 1961..992 | 4835 | 99.8 | Minus |
X | 23527363 | X | 19187090..19187882 | 793..1 | 3935 | 99.7 | Minus |
X | 23527363 | X | 19186138..19186345 | 993..786 | 1040 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TART-A | 13424 | TART-A 13424bp | 10324..10418 | 1573..1666 | 148 | 63.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19066925..19067132 | 786..993 | 99 | <- | Minus |
chrX | 19065881..19066843 | 994..1959 | 99 | <- | Minus |
chrX | 19067884..19068668 | 1..785 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7556-RA | 1..1569 | 106..1674 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7556-RA | 1..1569 | 106..1674 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7556-RA | 1..1569 | 106..1674 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7556-RA | 1..1569 | 106..1674 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7556-RA | 1..1569 | 106..1674 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7556-RA | 172..2130 | 1..1959 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7556-RA | 172..2130 | 1..1959 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7556-RA | 47..2005 | 1..1959 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7556-RA | 172..2130 | 1..1959 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7556-RA | 47..2005 | 1..1959 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19176997..19177962 | 994..1959 | 99 | <- | Minus |
X | 19178040..19178247 | 786..993 | 100 | <- | Minus |
X | 19179000..19179784 | 1..785 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19176997..19177962 | 994..1959 | 99 | <- | Minus |
X | 19178040..19178247 | 786..993 | 100 | <- | Minus |
X | 19179000..19179784 | 1..785 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19176997..19177962 | 994..1959 | 99 | <- | Minus |
X | 19178040..19178247 | 786..993 | 100 | <- | Minus |
X | 19179000..19179784 | 1..785 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19073033..19073817 | 1..785 | 100 | Minus | |
arm_X | 19071030..19071995 | 994..1959 | 99 | <- | Minus |
arm_X | 19072073..19072280 | 786..993 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19185095..19186060 | 994..1959 | 99 | <- | Minus |
X | 19186138..19186345 | 786..993 | 100 | <- | Minus |
X | 19187098..19187882 | 1..785 | 100 | Minus |
Translation from 105 to 1673
> GH07340.pep MMMRPELTLAGLLLLCATGASAWHSEELEIFDLVEEVNRNFYEFMGINQT ATGAEVKRAFRTLSIVLHPDKNPAEDANIQFRNLVSIYEVLKDPSRREKY DRVLKEGMPNWKSALYYYRRMRKIGLYEGAFILFLITTVGQYLFAWAAYL EKKYTAEQVFGTKLKKLQKKNKNIDMDVILSEIPMPSLLNTLPIQIPLAL WNLPRTIKNGFSKANELKELALEKRRQELEAVRRQEELEREAEEQARLRK EHKENLRKRKQNSKAPEKTEEELRGYSQIQTRELTDDDAVRPASQKSTVS GGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRSVQEVTFMAAKMKE NGYRIPGQTDSVAEALVQESQQAQRKEKVKKAAANAGASAEKSMLIPETN WTQEQQRALEAAIVKYRKTAGGDRWQKIANSVPEKTKEECLVRYKYLCEL VKTQKRAEEEANEPDEDAAAIEEELPEEEPLAPPEPEVAPAAKKLSKREQ RRRKRDLSSGEDSDDAYQYEIS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16003-PA | 534 | GF16003-PA | 9..534 | 9..522 | 2257 | 89 | Plus |
Dana\GF23490-PA | 130 | GF23490-PA | 1..108 | 37..149 | 159 | 31.4 | Plus |
Dana\GF15175-PA | 346 | GF15175-PA | 3..72 | 39..108 | 158 | 41.4 | Plus |
Dana\GF19555-PA | 334 | GF19555-PA | 1..72 | 37..108 | 153 | 38.9 | Plus |
Dana\GF10450-PA | 354 | GF10450-PA | 1..78 | 37..110 | 151 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18074-PA | 521 | GG18074-PA | 1..521 | 2..522 | 2671 | 96.9 | Plus |
Dere\GG13187-PA | 127 | GG13187-PA | 1..106 | 37..149 | 166 | 31 | Plus |
Dere\GG24779-PA | 350 | GG24779-PA | 1..72 | 37..108 | 161 | 40.3 | Plus |
Dere\GG10228-PA | 389 | GG10228-PA | 3..85 | 38..118 | 155 | 40 | Plus |
Dere\DnaJ-1-PA | 351 | GG14117-PA | 1..72 | 37..108 | 151 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17711-PA | 530 | GH17711-PA | 24..530 | 21..522 | 2113 | 85.1 | Plus |
Dgri\GH11404-PA | 346 | GH11404-PA | 1..72 | 37..108 | 163 | 41.7 | Plus |
Dgri\GH16902-PA | 127 | GH16902-PA | 1..106 | 37..149 | 153 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7556-PB | 522 | CG7556-PB | 1..522 | 1..522 | 2661 | 100 | Plus |
CG7556-PA | 522 | CG7556-PA | 1..522 | 1..522 | 2661 | 100 | Plus |
CG5001-PC | 346 | CG5001-PC | 1..72 | 37..108 | 169 | 40.3 | Plus |
CG5001-PD | 350 | CG5001-PD | 1..72 | 37..108 | 169 | 40.3 | Plus |
CG5001-PA | 350 | CG5001-PA | 1..72 | 37..108 | 169 | 40.3 | Plus |
CG5001-PB | 350 | CG5001-PB | 1..72 | 37..108 | 169 | 40.3 | Plus |
mrj-PA | 259 | CG8448-PA | 3..73 | 40..108 | 159 | 42.3 | Plus |
mrj-PC | 259 | CG8448-PC | 3..73 | 40..108 | 159 | 42.3 | Plus |
mrj-PB | 259 | CG8448-PB | 3..73 | 40..108 | 159 | 42.3 | Plus |
mrj-PD | 259 | CG8448-PD | 3..73 | 40..108 | 159 | 42.3 | Plus |
shv-PA | 354 | CG4164-PA | 16..99 | 33..108 | 158 | 44 | Plus |
CG7130-PA | 128 | CG7130-PA | 1..107 | 37..149 | 153 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15454-PA | 519 | GI15454-PA | 20..519 | 16..522 | 2155 | 84.3 | Plus |
Dmoj\GI11521-PA | 505 | GI11521-PA | 1..137 | 37..192 | 191 | 28.8 | Plus |
Dmoj\GI14539-PA | 347 | GI14539-PA | 1..72 | 37..108 | 159 | 40.3 | Plus |
Dmoj\GI20061-PA | 339 | GI20061-PA | 55..140 | 24..107 | 159 | 40.7 | Plus |
Dmoj\GI13174-PA | 352 | GI13174-PA | 1..72 | 37..108 | 151 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13020-PA | 538 | GL13020-PA | 23..538 | 20..522 | 2039 | 82.8 | Plus |
Dper\GL25452-PA | 129 | GL25452-PA | 1..124 | 37..177 | 167 | 27.7 | Plus |
Dper\GL15626-PA | 318 | GL15626-PA | 1..78 | 37..114 | 162 | 38.5 | Plus |
Dper\GL10957-PA | 341 | GL10957-PA | 78..162 | 24..108 | 152 | 40.2 | Plus |
Dper\GL24772-PA | 392 | GL24772-PA | 3..81 | 38..114 | 152 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20437-PA | 538 | GA20437-PA | 23..538 | 20..522 | 2019 | 81.6 | Plus |
Dpse\GA18584-PA | 346 | GA18584-PA | 1..72 | 37..108 | 160 | 40.3 | Plus |
Dpse\GA15683-PA | 385 | GA15683-PA | 113..197 | 24..108 | 153 | 40.2 | Plus |
Dpse\GA22062-PA | 392 | GA22062-PA | 3..81 | 38..114 | 152 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22763-PA | 521 | GM22763-PA | 1..521 | 2..522 | 2720 | 99 | Plus |
Dsec\GM16806-PA | 350 | GM16806-PA | 1..72 | 37..108 | 163 | 40.3 | Plus |
Dsec\GM22099-PA | 128 | GM22099-PA | 1..107 | 37..149 | 162 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15599-PA | 226 | GD15599-PA | 1..226 | 2..227 | 1202 | 99.1 | Plus |
Dsim\GD23083-PA | 346 | GD23083-PA | 1..72 | 37..108 | 164 | 40.3 | Plus |
Dsim\GD12075-PA | 128 | GD12075-PA | 1..107 | 37..149 | 149 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19169-PA | 529 | GJ19169-PA | 19..529 | 15..522 | 2186 | 82.2 | Plus |
Dvir\GJ16971-PA | 347 | GJ16971-PA | 1..72 | 37..108 | 159 | 38.9 | Plus |
Dvir\GJ14959-PA | 667 | GJ14959-PA | 374..485 | 16..126 | 154 | 34.5 | Plus |
Dvir\GJ11775-PA | 124 | GJ11775-PA | 1..108 | 37..154 | 148 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25169-PA | 524 | GK25169-PA | 17..524 | 15..522 | 2107 | 84.1 | Plus |
Dwil\GK15183-PA | 346 | GK15183-PA | 1..72 | 37..108 | 159 | 40.3 | Plus |
Dwil\GK19767-PA | 330 | GK19767-PA | 1..81 | 37..113 | 157 | 40.7 | Plus |
Dwil\GK19161-PA | 125 | GK19161-PA | 1..72 | 37..108 | 155 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15471-PA | 521 | GE15471-PA | 1..521 | 2..522 | 2710 | 98.5 | Plus |
Dyak\GE22992-PA | 127 | GE22992-PA | 1..106 | 37..149 | 164 | 31 | Plus |
Dyak\GE19512-PA | 127 | GE19512-PA | 1..106 | 37..149 | 164 | 31 | Plus |
Dyak\GE17451-PA | 350 | GE17451-PA | 1..72 | 37..108 | 161 | 40.3 | Plus |
Dyak\GE11908-PA | 389 | GE11908-PA | 3..85 | 38..118 | 156 | 40 | Plus |
Translation from 105 to 1673
> GH07340.hyp MMMRPELTLAGLLLLCATGASAWHSEELEIFDLVEEVNRNFYEFMGINQT ATGAEVKRAFRTLSIVLHPDKNPAEDANIQFRNLVSIYEVLKDPSRREKY DRVLKEGMPNWKSALYYYRRMRKIGLYEGAFILFLITTVGQYLFAWAAYL EKKYTAEQVFGTKLKKLQKKNKNIDMDVILSEIPMPSLLNTLPIQIPLAL WNLPRTIKNGFSKANELKELALEKRRQELEAVRRQEELEREAEEQARLRK EHKENLRKRKQNSKAPEKTEEELRGYSQIQTRELTDDDAVRPASQKSTVS GGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRSVQEVTFMAAKMKE NGYRIPGQTDSVAEALVQESQQAQRKEKVKKAAANAGASAEKSMLIPETN WTQEQQRALEAAIVKYRKTAGGDRWQKIANSVPEKTKEECLVRYKYLCEL VKTQKRAEEEANEPDEDAAAIEEELPEEEPLAPPEPEVAPAAKKLSKREQ RRRKRDLSSGEDSDDAYQYEIS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7556-PB | 522 | CG7556-PB | 1..522 | 1..522 | 2661 | 100 | Plus |
CG7556-PA | 522 | CG7556-PA | 1..522 | 1..522 | 2661 | 100 | Plus |
CG5001-PC | 346 | CG5001-PC | 1..72 | 37..108 | 169 | 40.3 | Plus |
CG5001-PD | 350 | CG5001-PD | 1..72 | 37..108 | 169 | 40.3 | Plus |
CG5001-PA | 350 | CG5001-PA | 1..72 | 37..108 | 169 | 40.3 | Plus |