Clone GH07353 Report

Search the DGRC for GH07353

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:73
Well:53
Vector:pOT2
Associated Gene/TranscriptSox21b-RA
Protein status:GH07353.pep: gold
Preliminary Size:2815
Sequenced Size:2669

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13483 2001-01-01 Release 2 assignment
CG6419 2001-01-01 Release 2 assignment
CG32139 2001-09-19 Blastp of sequenced clone
CG32139 2003-01-01 Sim4 clustering to Release 3
Sox21b 2008-04-29 Release 5.5 accounting
Sox21b 2008-08-15 Release 5.9 accounting
Sox21b 2008-12-18 5.12 accounting

Clone Sequence Records

GH07353.complete Sequence

2669 bp (2669 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058313

> GH07353.complete
AACGGATCCGTTGAATAGCCGCCAAAGCGCGCTTAGATGCAGCAACAGCC
AACTTGGCCAAGAAGAGCCGATCAGCCAACAGCTAGCGACGGTTTTAGCC
CCCTCACAAGAAACGCCAAGAAACAACCGATATTCGCAAAAAAAAAATAC
AAAGGATAATACTAAAAACATAAACAAACTGTTCTCGCTCAACGCATCAA
AATCTTCTCACCACCACCAGTTCCAGCACCAATAGTTCCAGCACCACCCA
GTCCGCCCGCCGGCTCGAGGGCCACAGATTGAGGCGCCAAGGAAGCCCGA
CTCCATCTACGATATGATGGAACGTCTGTCCACGCACCTGTCGCTCACCG
GCCTATCGCTAGCTCATCCCCTGCAAACTCACCTGGGTTCCGGCGGCGGA
ACGCACCACCTTGGTCAACTGGCGGCGGCGGTGCATCAGCAGCAACAGCA
GCAGCAACAATCTGACCAGGGTCTCGGCCACTCGCACCACCTGCACGGCC
AGCAGTTGTCGCTGAACCACCAGCACCACCATCCCCACCAGTCGCCACAG
CATCAGCAGCAGCATCAGCACCACCCGTGCAGTAGCAACAGCAGCAACGG
ATCCCCCAACGGCTCCACCGGCCTGGGCCTGCATCCCCACTCGGCGCTCC
ACCTGGCACACCATCACTCGCAGCTGCATCAGCACCACCCGGCGGGTCAG
CAGCAGCAGCACAGCCAACCGCCGGTTTCCTCCTCCTCGACCTCGCACCA
CAGCCAGTCGCAGGCGCTGAGCCATCAGACGCACAGCAACGGCAGCTCCC
AGCTGGGCGGTGGTTCGGCCAGTGGTGCGGGATCAGTGGCCGGCGGTGCA
GCCAACAGCCACCACAGTGCTCCAGCCTCCAGCAGCGTGATGGCGGCCGC
AGCAGCCGCCCACCTGCATCACAACTCGCAGGCATCGCCCATCAGCAATC
TGCACCAAAACATGGGCAGTCTCATGAACAGCGGAAGCAGCGCGAGCGAT
GTCTTCTTTAGTCTGATGATCCAGAACACAACAAAGCGCCAAAACGAGGA
GCACATAAAACGTCCAATGAACGCTTTCATGGTCTGGTCGAGACTTCAGC
GGCGCAAGATAGCTCAGGATAATCCTAAGATGCACAATTCAGAGATATCC
AAAAGGCTGGGTGCCGAGTGGAAGTTGCTCACCGAGGAGGAGAAGCGTCC
GTTCATCGATGAGGCCAAACGATTGAGGGCCATGCACATGAAGGAACATC
CGGACTATAAATACAGACCGCGACGAAAGCCAAAAGCTCTGAGACGCGAT
GGCTATCCTTATCCAATGCCATATCCATCTGTGCCCGTGGAGGCGTTAAG
AGCGGGCATAACGCCCGGTTACTTTGCGCCCGGTCCCACAGCGGCTGCCT
ATCACCTGGGCAGCCATCTCGGCCAGACATCGACGCCAACCACGACGCAG
GCCACCCTCTCCGGTCAGATGGACAAGTTCGCCCTGGAGCGCAGCTCGTA
TCTGAGCAACTCCTCGCAGGCGAGTGCCTACAGCGCCTACTTGGACCCCA
GTGTGCTGACCAAGGCGTATTTCGACTCCAAGATGTACCAGGATCGGGCG
GCCAACTATGCCTTCGACATATCCAAGATTTATGGTGCCCAGCAACATGC
AGCAGCCCACCACCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGC
AGCAGCAACAGTTGCTGCTCAGCGGTGGTGGGGGCAGCGGCGGGGGCGGC
AGTGCCAGCTCGCACAACAACAACAGCAGCAGTGGGCTGGATGACCGCGA
TGCCACACCCCAATTGGAGGCGGTTGAGTCCAAGCCGCATCTGCATTCGC
CCAGTGATGTGGGTCTGGACTACGCCCAATATGCCCAGCAATATGGCGGT
CAATTGGCAGCGGCAGCGGGTGGTGCAGTGGGTGGTGGGGCCGCAGGTGC
AGCCGGGGGCTCGGCGGGCGGTGGGAGTGGTGGCGCCACCGCCGCGGACT
TTCGACGACCGCTAACGGTGATCTTCTGACCACCATCTTCCAATGGCAGC
GAGGAGTTGAACTTGTCCATGACCTAGGAACAAGAAAGGGGATCGCTTCT
TTTCCGTTCGCAATTCTGATCGCGTTTATTCGAACCGCTCAAAAGTGTCA
TGCGTTTTCCCGAAAGTTTTAAATCTTTCTCTTTTTCTTTAAATTTATTA
TTTGAGCAACTTCAAGCGATTTTTGAGATCAGAATTTGCTACGCGAAACG
AGTTGAAAAATTCCCAAAAGGATATAACGAAAAGGGTAAAACGAATATAA
CCGAAAAAGCGAGATTAAAGTTAAACGTAGCCAACATTTACATTTAAGTC
TCCAGTTGTAAACTATACTTAAGCTTTGTTAAAATAGAGCAAGCAGGAAA
ATGGAGAAGTGACCGAAAGATACATAGGTTATGAAAATCGGTTCAGAGTG
GCAAAATCACTTAGGAAAAACAAGGAGAAAATTTCAAACAAATTGAAACA
ACAACGAGCGGTGCAATTTTTTATGTTTTAAACGCAGATCGAAGTGCATA
GCATAAATTTAAAATTAAATTTAAATGTATTTAAATTCTACACTAAACAC
ACACAAAACAAAGCAAAATACACACAAAATATATACATCAGAAACCAGAA
AAAAAAAAAAAAAAAAAAA

GH07353.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:24:07
Subject Length Description Subject Range Query Range Score Percent Strand
Sox21b-RA 2670 Sox21b-RA 1..2669 1..2669 13300 99.8 Plus
Dichaete-RA 2944 Dichaete-RA 1627..1856 1052..1281 550 82.6 Plus
Sox21a-RA 1551 Sox21a-RA 481..710 1052..1281 520 81.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:58:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 14102561..14103761 2648..1448 5915 99.5 Minus
chr3L 24539361 chr3L 14115547..14116356 996..187 4050 100 Minus
chr3L 24539361 chr3L 14121294..14121479 187..1 870 98.9 Minus
chr3L 24539361 chr3L 14115232..14115399 1162..995 840 100 Minus
chr3L 24539361 chr3L 14108604..14108734 1356..1226 655 100 Minus
chr3L 24539361 chr3L 14166813..14167042 1281..1052 550 82.6 Minus
chr3L 24539361 chr3L 14106420..14106516 1451..1355 485 100 Minus
chr3L 24539361 chr3L 14096700..14096873 1225..1052 420 82.8 Minus
chr3L 24539361 chr3L 14108790..14108858 1228..1160 345 100 Minus
chr2L 23010047 chr2L 8825937..8826162 1067..1292 335 76.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:36:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:58:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14112384..14113605 2669..1448 6065 99.8 Minus
3L 28110227 3L 14125390..14126199 996..187 4050 100 Minus
3L 28110227 3L 14131138..14131324 187..1 935 100 Minus
3L 28110227 3L 14125084..14125251 1162..995 840 100 Minus
3L 28110227 3L 14118444..14118574 1356..1226 655 100 Minus
3L 28110227 3L 14176689..14176918 1281..1052 550 82.6 Minus
3L 28110227 3L 14116265..14116361 1451..1355 485 100 Minus
3L 28110227 3L 14106544..14106717 1225..1052 420 82.8 Minus
3L 28110227 3L 14118630..14118698 1228..1160 345 100 Minus
2L 23513712 2L 8827040..8827265 1067..1292 335 76.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:46:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 14105484..14106705 2669..1448 6065 99.7 Minus
3L 28103327 3L 14118490..14119299 996..187 4050 100 Minus
3L 28103327 3L 14124238..14124424 187..1 935 100 Minus
3L 28103327 3L 14118184..14118351 1162..995 840 100 Minus
3L 28103327 3L 14111544..14111674 1356..1226 655 100 Minus
3L 28103327 3L 14169789..14170018 1281..1052 550 82.6 Minus
3L 28103327 3L 14109365..14109461 1451..1355 485 100 Minus
3L 28103327 3L 14099644..14099817 1225..1052 420 82.7 Minus
3L 28103327 3L 14111730..14111798 1228..1160 345 100 Minus
2L 23513712 2L 8827070..8827265 1097..1292 320 77.5 Plus
Blast to na_te.dros performed 2019-03-16 19:58:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6911 434..622 290 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2291..2539 427..678 263 57.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6742..6923 433..622 255 62.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6763..6923 433..598 252 63.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2541 434..641 237 59.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6959 516..725 234 60.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2354..2642 433..724 218 55.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2322..2502 434..622 214 60.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6784..6964 433..613 212 60.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2422 1664..1781 198 64.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6797..6952 434..594 198 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2607..2922 404..719 193 53.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2397..2536 434..576 185 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2382..2539 434..593 183 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6817..6944 433..557 182 62.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2778..2961 416..598 171 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2805..3014 434..642 164 58.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2436..2622 426..610 155 57.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6830..7007 431..598 147 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6819 1683..1781 146 62 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2478..2658 426..598 145 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2831..2989 433..593 144 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2785..3031 438..684 137 53 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6864 561..717 137 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..6826 650..717 135 68.1 Plus
roo 9092 roo DM_ROO 9092bp 1124..1150 434..460 126 96.3 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 67..196 581..709 126 59.7 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9097..9226 581..709 126 59.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6893..7059 434..602 120 55.8 Plus
roo 9092 roo DM_ROO 9092bp 1099..1137 422..459 120 82.1 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 7941..7977 424..459 119 83.8 Plus
TART-C 11124 TART-C TARTC 11124bp 9385..9421 424..459 119 83.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1309..1400 116..204 118 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2354..2427 646..719 118 62.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2597..2779 433..617 118 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6851 666..796 117 59.6 Plus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 641..705 710..643 117 66.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2370 659..715 116 69 Plus
accord2 7650 accord2 QBERT 7650bp 3875..4046 2529..2364 116 58 Minus

GH07353.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:58:48 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 14106421..14106515 1356..1450 100 <- Minus
chr3L 14108605..14108732 1228..1355 100 <- Minus
chr3L 14108791..14108857 1161..1227 100 <- Minus
chr3L 14115234..14115397 997..1160 100 <- Minus
chr3L 14102561..14103494 1715..2648 95 == Minus
chr3L 14103570..14103758 1451..1639 100 <- Minus
chr3L 14115547..14115942 601..996 100 == Minus
chr3L 14116111..14116355 188..432 100 <- Minus
chr3L 14121294..14121479 1..187 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:43:19 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
Sox21b-RA 1..1716 314..2029 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:09:17 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
Sox21b-RA 1..1716 314..2029 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:50:29 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
Sox21b-RC 1..1764 314..2077 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:40:14 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
Sox21b-RA 1..1716 314..2029 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:48:15 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
Sox21b-RC 1..1764 314..2077 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:43:19 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
Sox21b-RA 1..2648 1..2648 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:09:17 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
Sox21b-RA 1..2648 1..2648 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:29 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
Sox21b-RA 1..2648 1..2648 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:40:16 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
Sox21b-RA 1..2648 1..2648 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:48:15 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
Sox21b-RA 1..2648 1..2648 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:58:48 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14112405..14113602 1451..2648 100 <- Minus
3L 14116266..14116360 1356..1450 100 <- Minus
3L 14118445..14118572 1228..1355 100 <- Minus
3L 14118631..14118697 1161..1227 100 <- Minus
3L 14125086..14125249 997..1160 100 <- Minus
3L 14125390..14126198 188..996 100 <- Minus
3L 14131138..14131324 1..187 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:58:48 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14112405..14113602 1451..2648 100 <- Minus
3L 14116266..14116360 1356..1450 100 <- Minus
3L 14118445..14118572 1228..1355 100 <- Minus
3L 14118631..14118697 1161..1227 100 <- Minus
3L 14125086..14125249 997..1160 100 <- Minus
3L 14125390..14126198 188..996 100 <- Minus
3L 14131138..14131324 1..187 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:58:48 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14112405..14113602 1451..2648 100 <- Minus
3L 14116266..14116360 1356..1450 100 <- Minus
3L 14118445..14118572 1228..1355 100 <- Minus
3L 14118631..14118697 1161..1227 100 <- Minus
3L 14125086..14125249 997..1160 100 <- Minus
3L 14125390..14126198 188..996 100 <- Minus
3L 14131138..14131324 1..187 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:29 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14118186..14118349 997..1160 100 <- Minus
arm_3L 14109366..14109460 1356..1450 100 <- Minus
arm_3L 14111545..14111672 1228..1355 100 <- Minus
arm_3L 14111731..14111797 1161..1227 100 <- Minus
arm_3L 14105505..14106702 1451..2648 100 <- Minus
arm_3L 14118490..14119298 188..996 100 <- Minus
arm_3L 14124238..14124424 1..187 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:17:41 Download gff for GH07353.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14105505..14106702 1451..2648 100 <- Minus
3L 14109366..14109460 1356..1450 100 <- Minus
3L 14111545..14111672 1228..1355 100 <- Minus
3L 14111731..14111797 1161..1227 100 <- Minus
3L 14118186..14118349 997..1160 100 <- Minus
3L 14118490..14119298 188..996 100 <- Minus
3L 14124238..14124424 1..187 100   Minus

GH07353.pep Sequence

Translation from 313 to 2028

> GH07353.pep
MMERLSTHLSLTGLSLAHPLQTHLGSGGGTHHLGQLAAAVHQQQQQQQQS
DQGLGHSHHLHGQQLSLNHQHHHPHQSPQHQQQHQHHPCSSNSSNGSPNG
STGLGLHPHSALHLAHHHSQLHQHHPAGQQQQHSQPPVSSSSTSHHSQSQ
ALSHQTHSNGSSQLGGGSASGAGSVAGGAANSHHSAPASSSVMAAAAAAH
LHHNSQASPISNLHQNMGSLMNSGSSASDVFFSLMIQNTTKRQNEEHIKR
PMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGIT
PGYFAPGPTAAAYHLGSHLGQTSTPTTTQATLSGQMDKFALERSSYLSNS
SQASAYSAYLDPSVLTKAYFDSKMYQDRAANYAFDISKIYGAQQHAAAHH
QQQQQQQQQQQQQQQQLLLSGGGGSGGGGSASSHNNNSSSGLDDRDATPQ
LEAVESKPHLHSPSDVGLDYAQYAQQYGGQLAAAAGGAVGGGAAGAAGGS
AGGGSGGATAADFRRPLTVIF*

GH07353.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25205-PA 611 GF25205-PA 1..611 1..571 1551 75.9 Plus
Dana\GF25204-PA 387 GF25204-PA 143..222 245..324 431 92.5 Plus
Dana\GF25206-PA 355 GF25206-PA 119..205 246..332 430 86.2 Plus
Dana\GF15546-PA 652 GF15546-PA 167..265 240..335 397 74.7 Plus
Dana\GF12898-PA 784 GF12898-PA 212..300 240..328 324 51.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:32:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13734-PA 581 GG13734-PA 1..581 1..571 2837 97.4 Plus
Dere\GG13733-PA 382 GG13733-PA 139..218 245..324 434 92.5 Plus
Dere\GG13735-PA 403 GG13735-PA 131..213 246..328 426 89.2 Plus
Dere\GG25303-PA 534 GG25303-PA 175..283 242..357 398 68.1 Plus
Dere\GG22439-PA 789 GG22439-PA 207..295 240..328 323 51.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:32:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16346-PA 645 GH16346-PA 159..645 133..571 1297 74.6 Plus
Dgri\GH16344-PA 413 GH16344-PA 153..238 239..324 439 88.4 Plus
Dgri\GH16347-PA 377 GH16347-PA 97..183 246..332 433 86.2 Plus
Dgri\GH13864-PA 602 GH13864-PA 190..283 242..335 394 76.6 Plus
Dgri\GH20045-PA 817 GH20045-PA 214..303 239..328 323 51.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:45
Subject Length Description Subject Range Query Range Score Percent Strand
Sox21b-PC 587 CG32139-PC 1..571 1..571 3014 100 Plus
Sox21b-PB 571 CG32139-PB 1..571 1..571 3014 100 Plus
Sox21b-PA 571 CG32139-PA 1..571 1..571 3014 100 Plus
SoxN-PA 572 CG18024-PA 14..487 73..542 520 32.5 Plus
SoxN-PB 761 CG18024-PB 14..487 73..542 520 32.5 Plus
D-PD 382 CG5893-PD 4..333 104..483 463 37.6 Plus
D-PC 382 CG5893-PC 4..333 104..483 463 37.6 Plus
D-PB 382 CG5893-PB 4..333 104..483 463 37.6 Plus
D-PA 382 CG5893-PA 4..333 104..483 463 37.6 Plus
Sox21a-PA 388 CG7345-PA 8..205 112..332 455 46.8 Plus
Sox21a-PB 407 CG7345-PB 8..205 112..332 455 46.8 Plus
Sox15-PA 784 CG8404-PA 3..449 78..465 334 24.3 Plus
Sox14-PC 669 CG3090-PC 37..261 121..322 313 35.3 Plus
Sox14-PB 669 CG3090-PB 37..261 121..322 313 35.3 Plus
Sox14-PA 669 CG3090-PA 37..261 121..322 313 35.3 Plus
Sox102F-PD 580 CG11153-PD 204..459 67..322 277 30 Plus
Sox102F-PC 580 CG11153-PC 204..459 67..322 277 30 Plus
Sox102F-PA 580 CG11153-PA 204..459 67..322 277 30 Plus
Sox102F-PB 618 CG11153-PB 242..497 67..322 277 30 Plus
Sox100B-PA 529 CG15552-PA 72..151 243..322 255 55 Plus
Vsx1-PB 837 CG4136-PB 558..738 25..199 182 32 Plus
Vsx1-PA 837 CG4136-PA 558..738 25..199 182 32 Plus
cic-PH 1275 CG43122-PH 176..414 41..322 179 24.3 Plus
cic-PA 1403 CG5067-PA 328..566 41..322 179 24.3 Plus
cic-PC 1427 CG43122-PC 328..566 41..322 179 24.3 Plus
cic-PB 1832 CG5067-PB 328..566 41..322 179 24.3 Plus
cic-PD 2141 CG43122-PD 1066..1304 41..322 179 24.3 Plus
cic-PG 2150 CG43122-PG 1070..1308 41..322 179 24.3 Plus
sr-PE 906 CG7847-PE 308..526 41..246 174 28.5 Plus
sr-PB 906 CG7847-PB 308..526 41..246 174 28.5 Plus
sr-PA 1186 CG7847-PA 588..806 41..246 174 28.5 Plus
sr-PD 1271 CG7847-PD 588..806 41..246 174 28.5 Plus
Pdp1-PJ 633 CG17888-PJ 118..288 35..228 173 29.4 Plus
Pdp1-PD 647 CG17888-PD 118..288 35..228 173 29.4 Plus
Rbfox1-PF 763 CG32062-PF 553..708 35..207 170 32.2 Plus
pb-PD 772 CG31481-PD 520..702 37..209 170 31.9 Plus
pb-PC 777 CG31481-PC 525..707 37..209 170 31.9 Plus
pb-PB 777 CG31481-PB 525..707 37..209 170 31.9 Plus
pb-PA 782 CG31481-PA 530..712 37..209 170 31.9 Plus
Rbfox1-PL 858 CG32062-PL 570..725 35..207 170 32.2 Plus
Rbfox1-PE 865 CG32062-PE 553..708 35..207 170 32.2 Plus
Rbfox1-PJ 889 CG32062-PJ 619..774 35..207 170 32.2 Plus
Rbfox1-PK 921 CG32062-PK 633..788 35..207 170 32.2 Plus
Rbfox1-PH 962 CG32062-PH 650..805 35..207 170 32.2 Plus
ct-PD 2165 CG11387-PD 604..800 31..209 168 29.2 Plus
Eip74EF-PA 829 CG32180-PA 557..693 39..192 167 33.8 Plus
Eip74EF-PE 844 CG32180-PE 572..708 39..192 167 33.8 Plus
Eip74EF-PC 868 CG32180-PC 596..732 39..192 167 33.8 Plus
Eip74EF-PD 883 CG32180-PD 611..747 39..192 167 33.8 Plus
Eip74EF-PB 883 CG32180-PB 611..747 39..192 167 33.8 Plus
rg-PL 3719 CG44835-PL 2146..2344 41..226 167 31.9 Plus
Vsx1-PB 837 CG4136-PB 576..737 18..199 164 30.4 Plus
Vsx1-PA 837 CG4136-PA 576..737 18..199 164 30.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11537-PA 614 GI11537-PA 163..614 139..571 1318 77.2 Plus
Dmoj\GI11536-PA 413 GI11536-PA 157..236 245..324 436 92.5 Plus
Dmoj\GI11538-PA 379 GI11538-PA 99..185 246..332 431 86.2 Plus
Dmoj\GI17415-PA 610 GI17415-PA 188..281 242..335 394 76.6 Plus
Dmoj\GI20453-PA 825 GI20453-PA 199..289 238..328 326 51.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:32:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24831-PA 403 GL24831-PA 147..226 245..324 431 92.5 Plus
Dper\GL24833-PA 616 GL24833-PA 344..428 248..332 429 87.1 Plus
Dper\GL25564-PA 565 GL25564-PA 179..294 246..380 402 60.7 Plus
Dper\GL17288-PA 786 GL17288-PA 208..296 240..328 319 51.7 Plus
Dper\GL11646-PA 648 GL11646-PA 147..240 240..329 309 53.2 Plus
Dper\GL24833-PA 616 GL24833-PA 1..67 1..67 175 68.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:32:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23525-PA 590 GA23525-PA 159..590 154..571 1355 81.9 Plus
Dpse\GA19209-PA 395 GA19209-PA 147..226 245..324 433 92.5 Plus
Dpse\GA20281-PA 396 GA20281-PA 120..204 248..332 422 87.1 Plus
Dpse\GA14769-PA 566 GA14769-PA 180..295 246..380 402 60.7 Plus
Dpse\GA21052-PA 786 GA21052-PA 208..300 240..332 320 50.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:32:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24556-PA 575 GM24556-PA 1..575 1..571 2902 98.8 Plus
Dsec\GM24555-PA 382 GM24555-PA 139..218 245..324 434 92.5 Plus
Dsec\GM24557-PA 386 GM24557-PA 119..201 246..328 429 89.2 Plus
Dsec\GM17140-PA 573 GM17140-PA 174..282 242..357 398 68.1 Plus
Dsec\GM20225-PA 784 GM20225-PA 207..295 240..328 322 51.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12629-PA 573 GD12629-PA 1..573 1..571 2915 99.3 Plus
Dsim\GD12627-PA 382 GD12627-PA 139..218 245..324 434 92.5 Plus
Dsim\GD12630-PA 385 GD12630-PA 119..201 246..328 432 89.2 Plus
Dsim\GD23563-PA 489 GD23563-PA 92..200 242..357 395 68.1 Plus
Dsim\Sox102F-PA 617 GD24371-PA 421..496 247..322 275 59.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11556-PA 627 GJ11556-PA 99..627 89..571 1393 71.6 Plus
Dvir\GJ11555-PA 414 GJ11555-PA 158..237 245..324 435 92.5 Plus
Dvir\GJ11557-PA 376 GJ11557-PA 93..179 246..332 433 86.2 Plus
Dvir\GJ18351-PA 575 GJ18351-PA 189..282 242..335 394 76.6 Plus
Dvir\GJ22304-PA 802 GJ22304-PA 201..291 238..328 328 51.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:32:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17144-PA 618 GK17144-PA 185..618 145..571 1336 78.3 Plus
Dwil\GK17145-PA 428 GK17145-PA 139..225 246..332 439 86.2 Plus
Dwil\GK17143-PA 420 GK17143-PA 174..253 245..324 434 92.5 Plus
Dwil\GK24531-PA 727 GK24531-PA 180..273 242..335 400 76.6 Plus
Dwil\GK21748-PA 784 GK21748-PA 216..308 240..332 322 50.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:32:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20028-PA 584 GE20028-PA 1..584 1..571 2804 95.7 Plus
Dyak\GE20027-PA 381 GE20027-PA 139..218 245..324 433 92.5 Plus
Dyak\GE20029-PA 397 GE20029-PA 127..213 246..332 432 86.2 Plus
Dyak\GE18794-PA 579 GE18794-PA 176..284 242..357 398 68.1 Plus
Dyak\GE12330-PA 791 GE12330-PA 207..295 240..328 322 51.7 Plus

GH07353.hyp Sequence

Translation from 313 to 2028

> GH07353.hyp
MMERLSTHLSLTGLSLAHPLQTHLGSGGGTHHLGQLAAAVHQQQQQQQQS
DQGLGHSHHLHGQQLSLNHQHHHPHQSPQHQQQHQHHPCSSNSSNGSPNG
STGLGLHPHSALHLAHHHSQLHQHHPAGQQQQHSQPPVSSSSTSHHSQSQ
ALSHQTHSNGSSQLGGGSASGAGSVAGGAANSHHSAPASSSVMAAAAAAH
LHHNSQASPISNLHQNMGSLMNSGSSASDVFFSLMIQNTTKRQNEEHIKR
PMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGIT
PGYFAPGPTAAAYHLGSHLGQTSTPTTTQATLSGQMDKFALERSSYLSNS
SQASAYSAYLDPSVLTKAYFDSKMYQDRAANYAFDISKIYGAQQHAAAHH
QQQQQQQQQQQQQQQQLLLSGGGGSGGGGSASSHNNNSSSGLDDRDATPQ
LEAVESKPHLHSPSDVGLDYAQYAQQYGGQLAAAAGGAVGGGAAGAAGGS
AGGGSGGATAADFRRPLTVIF*

GH07353.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:27:39
Subject Length Description Subject Range Query Range Score Percent Strand
Sox21b-PC 587 CG32139-PC 1..571 1..571 3014 100 Plus
Sox21b-PB 571 CG32139-PB 1..571 1..571 3014 100 Plus
Sox21b-PA 571 CG32139-PA 1..571 1..571 3014 100 Plus
SoxN-PA 572 CG18024-PA 14..487 73..542 520 32.5 Plus
SoxN-PB 761 CG18024-PB 14..487 73..542 520 32.5 Plus