Clone GH07367 Report

Search the DGRC for GH07367

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:73
Well:67
Vector:pOT2
Associated Gene/TranscriptCG5412-RA
Protein status:GH07367.pep: gold
Preliminary Size:1166
Sequenced Size:1018

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5412 2001-01-01 Release 2 assignment
CG5412 2002-03-19 Blastp of sequenced clone
CG5412 2003-01-01 Sim4 clustering to Release 3
CG5412 2008-04-29 Release 5.5 accounting
CG5412 2008-08-15 Release 5.9 accounting
CG5412 2008-12-18 5.12 accounting

Clone Sequence Records

GH07367.complete Sequence

1018 bp (1018 high quality bases) assembled on 2002-03-19

GenBank Submission: AY094682

> GH07367.complete
AGCCATAACCTTGTTTATTTTGTATTGTTTTTCTTAGTTAAAATTATAAA
ATCATAAAATAAGATGACCAACAACGATGCGGCCGTGGAGGCAGCCGGCT
CCAGTCGGGCCAGCAGCAGCAAACAGCAGCTGAAGCTGGAAATCACCGAG
AAGGTGCGAGTCCTGTGCCTGCACGGTTACCGCCAGAATGGAGAAGCCTT
CAAAAACAAGCTGGGCTCCTTCCGCAAGTTCGCCAACAAGTACGCAGAGT
TCGTGTTCATCACGGCGCCGCACGTGGCCAAGGCACTGGAGTCGGCGGCG
GAGCCTGTGCCGGAGCAGAGGAGTTGGTGGGCCAACAAGGACGATGGCTC
CTTCAAGGGAACAAACAAAGGTGGTCCCGCCTTCGGCTTTCAGGAGAGCC
TGCGCTGCGTTGAGGAGGCGTGGCGGACGCAGGGCCCTTTCCAGGGACTG
CTAGGCTTCTCACAGGGCGCCTGTTTCGTGGGTCTTATATGCGGCCTGGC
CAAAAAGAAGTTGACCTCCATCCGTCCGGAGTTTGCTGTGCTAGCCTCGG
GCTTCTTGTCTGGCAGTCTGGTGCACATGAGCGCCTACGAAGAGGCCATC
AGCATACCCACGTTGCACATCTACGGACAGACGGATGAGATCATTCCCAA
GGAGATGAGCGAGTCCCTGGCTGCGCGCTTCAAGAACGCCGAGGTGCTGG
AGCACAGCGGCGGACACTACTTCCCGGCCACGGCGCAGCAGAAGCAGACA
TTCATCAACTTCTTCCAGGATCGGCTGCAGGAGTACCTGGAGCACGAGGA
GTTGCAGCAGAGCGGCAATGCCTCATTCGTGGATAGCGGAGCGGAGGACG
ACAACGATGCCGAGGTGGCGGCCATGACGGCCGAGCTGGACGAGAGTGAT
TAGCCGAGGGACGGGGGTTTTTTCGTTCGTTTTTAATAATAATTAAATCT
TATTATTACAAAAATAATGATTTGATTATAAATTATAATATAATTAGAAA
AAAAAAAAAAAAAAAAAA

GH07367.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG5412-RA 1161 CG5412-RA 69..1066 1..998 4990 100 Plus
CG5412.a 1029 CG5412.a 69..1029 37..997 4805 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 16400990..16401500 1..511 2555 100 Plus
chr3R 27901430 chr3R 16401560..16402045 512..997 2430 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:36:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:43:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20577076..20577586 1..511 2555 100 Plus
3R 32079331 3R 20577646..20578132 512..998 2435 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 20317907..20318417 1..511 2555 100 Plus
3R 31820162 3R 20318477..20318963 512..998 2435 100 Plus
Blast to na_te.dros performed on 2019-03-15 21:43:35 has no hits.

GH07367.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:44:48 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 16400990..16401500 1..511 100 -> Plus
chr3R 16401560..16401972 512..924 100 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:23:16 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
CG5412-RA 1..840 64..903 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:31:32 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
CG5412-RA 1..840 64..903 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:56:16 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
CG5412-RA 1..840 64..903 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:04:46 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
CG5412-RA 1..840 64..903 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:01:11 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
CG5412-RA 1..840 64..903 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:57:35 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
CG5412-RA 69..1065 1..997 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:31:32 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
CG5412-RA 69..1065 1..997 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:56:16 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
CG5412-RA 24..1020 1..997 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:04:46 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
CG5412-RA 69..1065 1..997 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:11 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
CG5412-RA 24..1020 1..997 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:44:48 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20577076..20577586 1..511 100 -> Plus
3R 20577646..20578131 512..997 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:44:48 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20577076..20577586 1..511 100 -> Plus
3R 20577646..20578131 512..997 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:44:48 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20577076..20577586 1..511 100 -> Plus
3R 20577646..20578131 512..997 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:56:16 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16402798..16403308 1..511 100 -> Plus
arm_3R 16403368..16403853 512..997 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:38:30 Download gff for GH07367.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20317907..20318417 1..511 100 -> Plus
3R 20318477..20318962 512..997 100   Plus

GH07367.hyp Sequence

Translation from 63 to 902

> GH07367.hyp
MTNNDAAVEAAGSSRASSSKQQLKLEITEKVRVLCLHGYRQNGEAFKNKL
GSFRKFANKYAEFVFITAPHVAKALESAAEPVPEQRSWWANKDDGSFKGT
NKGGPAFGFQESLRCVEEAWRTQGPFQGLLGFSQGACFVGLICGLAKKKL
TSIRPEFAVLASGFLSGSLVHMSAYEEAISIPTLHIYGQTDEIIPKEMSE
SLAARFKNAEVLEHSGGHYFPATAQQKQTFINFFQDRLQEYLEHEELQQS
GNASFVDSGAEDDNDAEVAAMTAELDESD*

GH07367.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:27:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG5412-PA 279 CG5412-PA 1..279 1..279 1441 100 Plus

GH07367.pep Sequence

Translation from 63 to 902

> GH07367.pep
MTNNDAAVEAAGSSRASSSKQQLKLEITEKVRVLCLHGYRQNGEAFKNKL
GSFRKFANKYAEFVFITAPHVAKALESAAEPVPEQRSWWANKDDGSFKGT
NKGGPAFGFQESLRCVEEAWRTQGPFQGLLGFSQGACFVGLICGLAKKKL
TSIRPEFAVLASGFLSGSLVHMSAYEEAISIPTLHIYGQTDEIIPKEMSE
SLAARFKNAEVLEHSGGHYFPATAQQKQTFINFFQDRLQEYLEHEELQQS
GNASFVDSGAEDDNDAEVAAMTAELDESD*

GH07367.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:35:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16680-PA 291 GF16680-PA 1..258 1..258 1267 89.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23967-PA 279 GG23967-PA 1..279 1..279 1426 96.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17157-PA 291 GH17157-PA 1..265 1..263 1145 79 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG5412-PA 279 CG5412-PA 1..279 1..279 1441 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:35:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10581-PA 289 GI10581-PA 1..266 1..266 1144 79.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:35:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13564-PA 289 GL13564-PA 1..258 1..258 1188 86.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:35:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18864-PA 289 GA18864-PA 1..258 1..258 1188 86.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:35:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23119-PA 279 GM23119-PA 1..279 1..279 1461 98.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19358-PA 279 GD19358-PA 1..279 1..279 1474 98.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:35:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22938-PA 290 GJ22938-PA 1..264 1..263 1133 78.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:35:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22454-PA 280 GK22454-PA 1..280 1..279 1195 79.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:35:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25670-PA 279 GE25670-PA 1..279 1..279 1422 95.3 Plus