BDGP Sequence Production Resources |
Search the DGRC for GH07590
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 75 |
Well: | 90 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6218-RA |
Protein status: | GH07590.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1314 |
Gene | Date | Evidence |
---|---|---|
CG6218 | 2001-01-01 | Release 2 assignment |
CG6218 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6218 | 2003-01-14 | Blastp of sequenced clone |
CG6218 | 2008-04-29 | Release 5.5 accounting |
CG6218 | 2008-08-15 | Release 5.9 accounting |
CG6218 | 2008-12-18 | 5.12 accounting |
1314 bp (1314 high quality bases) assembled on 2003-01-14
GenBank Submission: AY069061
> GH07590.complete TCAAAGCGTTCGGAACGTGGACGGATTGAGCTCCGCCGGGAACCGCCTTC TCCACATCAACAGCCTTTTGAACCACATTCCTGTTGGGATTCGCTTTGGC CCAGCTTGCTAACTCACAATGAAATATTTTGGCGGAGTCGAAGGCGGAGC CACCCACTCCAGACTGGTCATCTGCGATGAGAGCGGCCAATCTGTGGGCG CCACCAGCGGCCTGGGCACCAATCACTGGGGCATTGGCATTCCGGAGTGC GCCCGCCGGATCGCTGACATGGTGGAGCGGGCGAAGGAGGAGGCGGGCAT TCCCAAGGAGACGCCCCTCACAAGTCTGGGATTGAGCCTTAGCGGCTGCG AGCAGGAGGCCACCAATCGCGAGCTGGAGCAGGAGCTGCGCACCACGTTT CCGGGCCTGGCCCAGAACTATGCCGTGTCCAGCGACACCATGGGCAGCAT GTACACCGCCTCGTCCATCGGAGGAATGGTCCTTATTTCAGGAACCGGAT CCAATTGCCTGCTGCGTAACCCTGACGGCTCCACGTCCAATTGTGGCGGC TGGGGCAACTTCCTCGGGGACGAGGGAAGCGCCTGGTACATCTCGTATCG CGCAGTCAAGGTGGTGTTCGACCATATGGACAACTTTGAGCAGTCAGCGG CTCCCGTGGAGAAAACTTGGAGTCTGATCAAGGAGCACTTTAGTTTGGAG ACGCGCCTGGATATGCTGCCGCACTGTTACGCCAAGTTCGACAAGCCCTT CTTCGCCAATCTGTGCAAAAAGCTGTCGCAGAACGCCGAAAATGGAGACG AACTGGCGCGCAGCTTGTTTCGCGAAGCTGGCGTTCATCTGGCCAGAATG ATCCTTGCCCTGCTGCCCAATGTGCACCAGGATCTGGTCAAGTCCGGGGA CCTAAGCGTAGTGTGCGTAGGATCCGTGTGGTCCAGCTGGGATCTGCTGC AGGAGGCCTTCATCAGTGAACTCGCTAAGACAACCATCGACTTCGACCTC AAGCTGGTGCGCATCACCAAGAGCAGTGCCTACGGAGCCTGCTACCTGGG TGCGGATAGTGCGGACTTCGATCTTCCGAGAAACTATGCCGACAACGTCA CAGTACTGTACACGTACACCGATCCTCGAAAGAAAGCCAAAGCCACCAAC GGCTGTAACTGTTAGATAAATTGTGTTTGACAACCCATTCCGCAATACAC TTCCCAATTGCCAAATTCGCAATCAATATTCCAGTTAGTGGTACGGATAG GTAGTATTATAGCTTATCAAAAAATAAATAATTTTATCCTTTGACGAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6218-RA | 2151 | CG6218-RA | 309..1607 | 1..1299 | 6495 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11163079..11163794 | 1296..581 | 3580 | 100 | Minus |
chr3R | 27901430 | chr3R | 11163986..11164214 | 581..353 | 1145 | 100 | Minus |
chr3R | 27901430 | chr3R | 11164304..11164516 | 356..144 | 1065 | 100 | Minus |
chr3R | 27901430 | chr3R | 11166915..11167020 | 144..39 | 530 | 100 | Minus |
chr3R | 27901430 | chr3R | 11167593..11167632 | 40..1 | 200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15338450..15339168 | 1299..581 | 3595 | 100 | Minus |
3R | 32079331 | 3R | 15339360..15339588 | 581..353 | 1145 | 100 | Minus |
3R | 32079331 | 3R | 15339678..15339890 | 356..144 | 1065 | 100 | Minus |
3R | 32079331 | 3R | 15342289..15342394 | 144..39 | 530 | 100 | Minus |
3R | 32079331 | 3R | 15342967..15343006 | 40..1 | 200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15079281..15079999 | 1299..581 | 3595 | 100 | Minus |
3R | 31820162 | 3R | 15080191..15080419 | 581..353 | 1145 | 100 | Minus |
3R | 31820162 | 3R | 15080509..15080721 | 356..144 | 1065 | 100 | Minus |
3R | 31820162 | 3R | 15083120..15083225 | 144..39 | 530 | 100 | Minus |
3R | 31820162 | 3R | 15083798..15083837 | 40..1 | 200 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11163986..11164211 | 356..581 | 100 | <- | Minus |
chr3R | 11163079..11163793 | 582..1296 | 100 | <- | Minus |
chr3R | 11164305..11164515 | 145..355 | 100 | <- | Minus |
chr3R | 11166915..11167019 | 40..144 | 100 | <- | Minus |
chr3R | 11167594..11167632 | 1..39 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6218-RA | 1..1047 | 119..1165 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6218-RA | 1..1047 | 119..1165 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6218-RA | 1..1047 | 119..1165 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6218-RA | 1..1047 | 119..1165 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6218-RA | 1..1047 | 119..1165 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6218-RA | 251..1546 | 1..1296 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6218-RA | 251..1546 | 1..1296 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6218-RA | 251..1546 | 1..1296 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6218-RA | 251..1546 | 1..1296 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6218-RA | 251..1546 | 1..1296 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15338453..15339167 | 582..1296 | 100 | <- | Minus |
3R | 15339360..15339585 | 356..581 | 100 | <- | Minus |
3R | 15339679..15339889 | 145..355 | 100 | <- | Minus |
3R | 15342289..15342393 | 40..144 | 100 | <- | Minus |
3R | 15342968..15343006 | 1..39 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15338453..15339167 | 582..1296 | 100 | <- | Minus |
3R | 15339360..15339585 | 356..581 | 100 | <- | Minus |
3R | 15339679..15339889 | 145..355 | 100 | <- | Minus |
3R | 15342289..15342393 | 40..144 | 100 | <- | Minus |
3R | 15342968..15343006 | 1..39 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15338453..15339167 | 582..1296 | 100 | <- | Minus |
3R | 15339360..15339585 | 356..581 | 100 | <- | Minus |
3R | 15339679..15339889 | 145..355 | 100 | <- | Minus |
3R | 15342289..15342393 | 40..144 | 100 | <- | Minus |
3R | 15342968..15343006 | 1..39 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11164175..11164889 | 582..1296 | 100 | <- | Minus |
arm_3R | 11165082..11165307 | 356..581 | 100 | <- | Minus |
arm_3R | 11165401..11165611 | 145..355 | 100 | <- | Minus |
arm_3R | 11168011..11168115 | 40..144 | 100 | <- | Minus |
arm_3R | 11168690..11168728 | 1..39 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15083120..15083224 | 40..144 | 100 | <- | Minus |
3R | 15083799..15083837 | 1..39 | 100 | Minus | |
3R | 15079284..15079998 | 582..1296 | 100 | <- | Minus |
3R | 15080191..15080416 | 356..581 | 100 | <- | Minus |
3R | 15080510..15080720 | 145..355 | 100 | <- | Minus |
Translation from 118 to 1164
> GH07590.pep MKYFGGVEGGATHSRLVICDESGQSVGATSGLGTNHWGIGIPECARRIAD MVERAKEEAGIPKETPLTSLGLSLSGCEQEATNRELEQELRTTFPGLAQN YAVSSDTMGSMYTASSIGGMVLISGTGSNCLLRNPDGSTSNCGGWGNFLG DEGSAWYISYRAVKVVFDHMDNFEQSAAPVEKTWSLIKEHFSLETRLDML PHCYAKFDKPFFANLCKKLSQNAENGDELARSLFREAGVHLARMILALLP NVHQDLVKSGDLSVVCVGSVWSSWDLLQEAFISELAKTTIDFDLKLVRIT KSSAYGACYLGADSADFDLPRNYADNVTVLYTYTDPRKKAKATNGCNC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23238-PA | 356 | GF23238-PA | 1..354 | 1..348 | 1624 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20660-PA | 349 | GG20660-PA | 1..345 | 1..345 | 1805 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21802-PA | 349 | GH21802-PA | 1..333 | 1..333 | 1501 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6218-PB | 348 | CG6218-PB | 1..348 | 1..348 | 1836 | 100 | Plus |
CG6218-PA | 348 | CG6218-PA | 1..348 | 1..348 | 1836 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21927-PA | 350 | GI21927-PA | 1..333 | 1..333 | 1468 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24295-PA | 355 | GL24295-PA | 1..352 | 1..348 | 1531 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19449-PA | 355 | GA19449-PA | 1..352 | 1..348 | 1544 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25783-PA | 348 | GM25783-PA | 1..348 | 1..348 | 1851 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20360-PA | 348 | GD20360-PA | 1..348 | 1..348 | 1851 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14287-PA | 348 | GJ14287-PA | 1..333 | 1..333 | 1515 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11957-PA | 351 | GK11957-PA | 1..332 | 1..332 | 1577 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26388-PA | 349 | GE26388-PA | 1..345 | 1..345 | 1805 | 96.8 | Plus |
Translation from 118 to 1164
> GH07590.hyp MKYFGGVEGGATHSRLVICDESGQSVGATSGLGTNHWGIGIPECARRIAD MVERAKEEAGIPKETPLTSLGLSLSGCEQEATNRELEQELRTTFPGLAQN YAVSSDTMGSMYTASSIGGMVLISGTGSNCLLRNPDGSTSNCGGWGNFLG DEGSAWYISYRAVKVVFDHMDNFEQSAAPVEKTWSLIKEHFSLETRLDML PHCYAKFDKPFFANLCKKLSQNAENGDELARSLFREAGVHLARMILALLP NVHQDLVKSGDLSVVCVGSVWSSWDLLQEAFISELAKTTIDFDLKLVRIT KSSAYGACYLGADSADFDLPRNYADNVTVLYTYTDPRKKAKATNGCNC*