BDGP Sequence Production Resources |
Search the DGRC for GH07619
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 76 |
Well: | 19 |
Vector: | pOT2 |
Associated Gene/Transcript | Mfap1-RA |
Protein status: | GH07619.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1706 |
Gene | Date | Evidence |
---|---|---|
CG1017 | 2001-01-01 | Release 2 assignment |
CG1017 | 2001-07-04 | Blastp of sequenced clone |
CG1017 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1017 | 2008-04-29 | Release 5.5 accounting |
CG1017 | 2008-08-15 | Release 5.9 accounting |
CG1017 | 2008-12-18 | 5.12 accounting |
1706 bp (1706 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047562
> GH07619.complete ATTTTCAGATACTTTTGTCCATCTCTAATTTACCATACTTTTATTTAGGA AATATTTACAAGGAATAAATACAAAGATTTGCTTATTACCCGTGGATTAT AAGTTAAAACCACGATGAGTGCAGCCACCGCCGCCGCCGCCGCTTCTGGG ATCCAGAGCACAGCGGGCGCCATTCCCATGCGCAATGAGAAAGGTGAATT GTCCATGCAAAAGGTGAAGGTGCAGCGATACATATCCGGTAAGCGACCCG ACTACGCCCGTGCGGACTCCAGTTCGGAGGAGAGCGACGACGATGACTTC ATTGACACCAGGAAGCGCCTTGAGCGCCACAAGGCGGAACGGCATAAGCT GGAGCTCTCCCGTCAAGGCGGCAGCGCGGAGGGCGAAGAGCGGGCGGCGG GTGAGGGCCAGGAGGAGGACGATGCCGAGGTGGACGATCCACGCCTCCGA AGATTGCGGCAGCGACCCGTAGACATGGAGGACATGGAACGTGAGCGGAG GGAACGCCACCGACACATCCACGAACCGGAAATCATGGAGAGTGACAGCG AAGACGAGGAGGAAGACGAGGGAGCACAGGGAGCGATTCAGCGGGGCACC AATAAGATCACACTGGCATCCGAATCCGACACGGATGCGGAGCTCAGCGA CACAGAGCTGGAGAACCGGCGCACCAAGCTGAGATCCCGCATGCTGCAGC AGCAGCGCGAGGAGGAGGTTCTACAGAAAGAGGATGAGAAACAGTCGGAA TCGTCCGAATCAGAAAGCTCCGAGTACGAGGAGGAGACCGAAAGCGAGGA GGACAACGAACCCCGCCTGAAGCCGCTCTTCGTCCGAAAGAGAGATCGTG CCACCATCCAGGAGAAGGAGCGAGAGGCTCAGAAGCAGAAGCAGCTGGAG GCGGAGGCCAAGCGGGCAGCCAAGGAGCGCAGAAGAGCCACCCTGCGAAT GGTCGAGGAGAGCGTCAAGAAAGATCTGGAGAAGACCAAGCCGGAGACCA ATGAGGCCTGCATCGAGGACGTGTGCACGGACGACGAAAACGACGAGGTG GAATACGAGGCCTGGAAGCTGCGTGAACTCAAGCGAATGAAGCGGGATCG CGAGGAACGTGATAACGTCGAACGCGAGAAGCTGGACATTGATCGCATGC GCAACATGACCGAAGAGGAGCGACGCCAGGAGCTGCGCCAGAACCCCAAG GTGGTCACCAACAAGGCCACCAAGGGCAAGTACAAGTTCCTGCAGAAGTA CTATCATCGTGGTGCCTTCTACCTGGATGAGGAGAACGACGTCCTCAAGC GCGACTTCGCCCAGGCCACGCTGGAGGATCACTTCGATAAGACCATTCTG CCCAAGGTGATGCAGGTGAAGAACTTCGGCCGCTGCGGCCGCACCAAGTA CACTCATTTAGTGGACCAGGACACCACCAAGTTCGACTCGCCCTGGTACG CCGAGTCATCCAGCAACATCAAGTTCCACAACGAACACGCCGGCGGCATG AGGCAGCAGTTTGACAAGCCCACCGGCTCGAAGCGAAAAAAGATGGAGTA GTGTTAGACGTATGTAATTGATGTATTTGACAGGCATTAGGAAAGTAACA AGTAAATATTGTGCGGCCACAGTTATGATGGAACCAAAACTTCATATACA AACAATTATATATAATACAAATATCATAAGTTTAAGGTAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1940876..1941799 | 192..1115 | 4620 | 100 | Plus |
chr3L | 24539361 | chr3L | 1941862..1942434 | 1116..1688 | 2865 | 100 | Plus |
chr3L | 24539361 | chr3L | 1940624..1940818 | 1..195 | 975 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
roo | 9092 | roo DM_ROO 9092bp | 1057..1148 | 851..941 | 114 | 62.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1940624..1940816 | 1..193 | 100 | -> | Plus |
chr3L | 1940878..1941799 | 194..1115 | 100 | -> | Plus |
chr3L | 1941862..1942434 | 1116..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1017-RA | 1..1437 | 115..1551 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mfap1-RA | 1..1437 | 115..1551 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mfap1-RA | 1..1437 | 115..1551 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1017-RA | 1..1437 | 115..1551 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mfap1-RA | 1..1437 | 115..1551 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1017-RA | 1..1688 | 1..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mfap1-RA | 1..1688 | 1..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mfap1-RA | 1..1682 | 7..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1017-RA | 1..1688 | 1..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mfap1-RA | 1..1682 | 7..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1941062..1941254 | 1..193 | 100 | -> | Plus |
3L | 1941316..1942237 | 194..1115 | 100 | -> | Plus |
3L | 1942300..1942872 | 1116..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1941062..1941254 | 1..193 | 100 | -> | Plus |
3L | 1941316..1942237 | 194..1115 | 100 | -> | Plus |
3L | 1942300..1942872 | 1116..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1941062..1941254 | 1..193 | 100 | -> | Plus |
3L | 1941316..1942237 | 194..1115 | 100 | -> | Plus |
3L | 1942300..1942872 | 1116..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1941062..1941254 | 1..193 | 100 | -> | Plus |
arm_3L | 1941316..1942237 | 194..1115 | 100 | -> | Plus |
arm_3L | 1942300..1942872 | 1116..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1941316..1942237 | 194..1115 | 100 | -> | Plus |
3L | 1942300..1942872 | 1116..1688 | 100 | Plus | |
3L | 1941062..1941254 | 1..193 | 100 | -> | Plus |
Translation from 114 to 1550
> GH07619.pep MSAATAAAAASGIQSTAGAIPMRNEKGELSMQKVKVQRYISGKRPDYARA DSSSEESDDDDFIDTRKRLERHKAERHKLELSRQGGSAEGEERAAGEGQE EDDAEVDDPRLRRLRQRPVDMEDMERERRERHRHIHEPEIMESDSEDEEE DEGAQGAIQRGTNKITLASESDTDAELSDTELENRRTKLRSRMLQQQREE EVLQKEDEKQSESSESESSEYEEETESEEDNEPRLKPLFVRKRDRATIQE KEREAQKQKQLEAEAKRAAKERRRATLRMVEESVKKDLEKTKPETNEACI EDVCTDDENDEVEYEAWKLRELKRMKRDREERDNVEREKLDIDRMRNMTE EERRQELRQNPKVVTNKATKGKYKFLQKYYHRGAFYLDEENDVLKRDFAQ ATLEDHFDKTILPKVMQVKNFGRCGRTKYTHLVDQDTTKFDSPWYAESSS NIKFHNEHAGGMRQQFDKPTGSKRKKME*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24847-PA | 477 | GF24847-PA | 2..477 | 5..478 | 1850 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14837-PA | 476 | GG14837-PA | 1..476 | 1..478 | 2435 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16168-PA | 472 | GH16168-PA | 2..472 | 5..478 | 1773 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mfap1-PA | 478 | CG1017-PA | 1..478 | 1..478 | 2449 | 100 | Plus |
CG2839-PA | 826 | CG2839-PA | 419..748 | 23..378 | 260 | 25.1 | Plus |
CG2839-PA | 826 | CG2839-PA | 280..570 | 44..356 | 250 | 24.8 | Plus |
CG2839-PA | 826 | CG2839-PA | 266..574 | 23..359 | 248 | 23.7 | Plus |
CG2839-PA | 826 | CG2839-PA | 268..558 | 66..360 | 231 | 26.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 331..639 | 43..382 | 229 | 24.9 | Plus |
CG2839-PA | 826 | CG2839-PA | 290..675 | 26..382 | 226 | 23.6 | Plus |
CG2839-PA | 826 | CG2839-PA | 466..750 | 28..299 | 220 | 25.2 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1226..1632 | 3..378 | 216 | 22.1 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1226..1632 | 3..378 | 216 | 22.1 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3776..4155 | 32..409 | 208 | 23.1 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3815..4194 | 32..409 | 208 | 23.1 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3776..4155 | 32..409 | 208 | 23.1 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 3815..4194 | 32..409 | 208 | 23.1 | Plus |
CG2839-PA | 826 | CG2839-PA | 264..540 | 95..359 | 204 | 25.4 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3516..3895 | 32..409 | 204 | 24.7 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3555..3934 | 32..409 | 204 | 24.7 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3516..3895 | 32..409 | 204 | 24.7 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 3555..3934 | 32..409 | 204 | 24.7 | Plus |
CG2839-PA | 826 | CG2839-PA | 499..793 | 43..332 | 203 | 23.7 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3971..4415 | 32..409 | 197 | 22.5 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4010..4454 | 32..409 | 197 | 22.5 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3971..4415 | 32..409 | 197 | 22.5 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4010..4454 | 32..409 | 197 | 22.5 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4621..5000 | 32..409 | 191 | 23.1 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4660..5039 | 32..409 | 191 | 23.1 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4621..5000 | 32..409 | 191 | 23.1 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4660..5039 | 32..409 | 191 | 23.1 | Plus |
CG2839-PA | 826 | CG2839-PA | 269..513 | 126..372 | 187 | 26 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1382..1657 | 51..340 | 185 | 23.2 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1382..1657 | 51..340 | 185 | 23.2 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4166..4541 | 32..405 | 183 | 22.8 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4205..4580 | 32..405 | 183 | 22.8 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4166..4541 | 32..405 | 183 | 22.8 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4205..4580 | 32..405 | 183 | 22.8 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4361..4805 | 32..409 | 181 | 22.6 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4400..4844 | 32..409 | 181 | 22.6 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4361..4805 | 32..409 | 181 | 22.6 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4400..4844 | 32..409 | 181 | 22.6 | Plus |
CG7971-PG | 1062 | CG7971-PG | 176..548 | 3..372 | 180 | 21.4 | Plus |
CG7971-PA | 1062 | CG7971-PA | 176..548 | 3..372 | 180 | 21.4 | Plus |
CG7971-PC | 1107 | CG7971-PC | 176..548 | 3..372 | 180 | 21.4 | Plus |
CG7971-PF | 1655 | CG7971-PF | 401..773 | 3..372 | 180 | 21.4 | Plus |
rgn-PD | 800 | CG6014-PD | 480..800 | 25..352 | 177 | 25.7 | Plus |
rgn-PA | 800 | CG6014-PA | 480..800 | 25..352 | 177 | 25.7 | Plus |
rgn-PC | 808 | CG6014-PC | 488..808 | 25..352 | 177 | 25.7 | Plus |
rgn-PB | 808 | CG6014-PB | 488..808 | 25..352 | 177 | 25.7 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4816..5146 | 32..372 | 175 | 22.7 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4855..5185 | 32..372 | 175 | 22.7 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4816..5146 | 32..372 | 175 | 22.7 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4855..5185 | 32..372 | 175 | 22.7 | Plus |
CG2839-PA | 826 | CG2839-PA | 510..749 | 25..258 | 171 | 23.3 | Plus |
rgn-PD | 800 | CG6014-PD | 325..648 | 67..391 | 171 | 22.9 | Plus |
rgn-PA | 800 | CG6014-PA | 325..648 | 67..391 | 171 | 22.9 | Plus |
rgn-PC | 808 | CG6014-PC | 333..656 | 67..391 | 171 | 22.9 | Plus |
rgn-PB | 808 | CG6014-PB | 333..656 | 67..391 | 171 | 22.9 | Plus |
rgn-PD | 800 | CG6014-PD | 463..776 | 55..359 | 166 | 23.3 | Plus |
rgn-PA | 800 | CG6014-PA | 463..776 | 55..359 | 166 | 23.3 | Plus |
rgn-PC | 808 | CG6014-PC | 471..784 | 55..359 | 166 | 23.3 | Plus |
rgn-PB | 808 | CG6014-PB | 471..784 | 55..359 | 166 | 23.3 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3438..3761 | 63..405 | 162 | 21.3 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3477..3800 | 63..405 | 162 | 21.3 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3438..3761 | 63..405 | 162 | 21.3 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 3477..3800 | 63..405 | 162 | 21.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13320-PA | 473 | GI13320-PA | 2..473 | 5..478 | 1740 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25318-PA | 469 | GL25318-PA | 2..469 | 5..478 | 1869 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10128-PA | 469 | GA10128-PA | 2..469 | 5..478 | 1869 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14461-PA | 286 | GM14461-PA | 1..286 | 193..478 | 1511 | 100 | Plus |
Dsec\GM14460-PA | 188 | GM14460-PA | 10..156 | 11..157 | 471 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13659-PA | 478 | GD13659-PA | 1..478 | 1..478 | 2501 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12090-PA | 472 | GJ12090-PA | 1..472 | 1..478 | 1794 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12529-PA | 474 | GK12529-PA | 2..474 | 5..478 | 1750 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21202-PA | 476 | GE21202-PA | 1..476 | 1..478 | 2447 | 98.1 | Plus |
Translation from 114 to 1550
> GH07619.hyp MSAATAAAAASGIQSTAGAIPMRNEKGELSMQKVKVQRYISGKRPDYARA DSSSEESDDDDFIDTRKRLERHKAERHKLELSRQGGSAEGEERAAGEGQE EDDAEVDDPRLRRLRQRPVDMEDMERERRERHRHIHEPEIMESDSEDEEE DEGAQGAIQRGTNKITLASESDTDAELSDTELENRRTKLRSRMLQQQREE EVLQKEDEKQSESSESESSEYEEETESEEDNEPRLKPLFVRKRDRATIQE KEREAQKQKQLEAEAKRAAKERRRATLRMVEESVKKDLEKTKPETNEACI EDVCTDDENDEVEYEAWKLRELKRMKRDREERDNVEREKLDIDRMRNMTE EERRQELRQNPKVVTNKATKGKYKFLQKYYHRGAFYLDEENDVLKRDFAQ ATLEDHFDKTILPKVMQVKNFGRCGRTKYTHLVDQDTTKFDSPWYAESSS NIKFHNEHAGGMRQQFDKPTGSKRKKME*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mfap1-PA | 478 | CG1017-PA | 1..478 | 1..478 | 2449 | 100 | Plus |
CG2839-PA | 826 | CG2839-PA | 419..748 | 23..378 | 260 | 25.1 | Plus |
CG2839-PA | 826 | CG2839-PA | 280..570 | 44..356 | 250 | 24.8 | Plus |
CG2839-PA | 826 | CG2839-PA | 266..574 | 23..359 | 248 | 23.7 | Plus |
CG2839-PA | 826 | CG2839-PA | 268..558 | 66..360 | 231 | 26.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 331..639 | 43..382 | 229 | 24.9 | Plus |
CG2839-PA | 826 | CG2839-PA | 290..675 | 26..382 | 226 | 23.6 | Plus |
CG2839-PA | 826 | CG2839-PA | 466..750 | 28..299 | 220 | 25.2 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1226..1632 | 3..378 | 216 | 22.1 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1226..1632 | 3..378 | 216 | 22.1 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3776..4155 | 32..409 | 208 | 23.1 | Plus |
CG2839-PA | 826 | CG2839-PA | 264..540 | 95..359 | 204 | 25.4 | Plus |
CG2839-PA | 826 | CG2839-PA | 499..793 | 43..332 | 203 | 23.7 | Plus |
CG2839-PA | 826 | CG2839-PA | 269..513 | 126..372 | 187 | 26 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1382..1657 | 51..340 | 185 | 23.2 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1382..1657 | 51..340 | 185 | 23.2 | Plus |
CG2839-PA | 826 | CG2839-PA | 510..749 | 25..258 | 171 | 23.3 | Plus |