BDGP Sequence Production Resources |
Search the DGRC for GH07821
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 78 |
Well: | 21 |
Vector: | pOT2 |
Associated Gene/Transcript | mRpS22-RA |
Protein status: | GH07821.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1367 |
Gene | Date | Evidence |
---|---|---|
CG12261 | 2001-01-01 | Release 2 assignment |
CG12261 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12261 | 2004-08-12 | Blastp of sequenced clone |
mRpS22 | 2008-04-29 | Release 5.5 accounting |
mRpS22 | 2008-08-15 | Release 5.9 accounting |
mRpS22 | 2008-12-18 | 5.12 accounting |
1367 bp (1367 high quality bases) assembled on 2004-08-12
GenBank Submission: BT021953
> GH07821.complete AAAACACCGTGCTGCCCTCACTAATTTCTACACCCGTCTCGTGTATTTTT GTGCCTGATTTACTGACTGAAAATGCACCTGCTGCGGAGCCTGCGCCAGC TGAATGGCCTCCAAGGAGTGCGCCAAGCTATCCGGCAGGTGTCCTCGGCG CCCACCAAGCCCGCCGCCCTGCAGTACGAGCGCGATCCGCAGCCGCTTTT CACGGATGCCGAAACCCAGCGGCTGCTCCAGTCCATGACGCAACTGAACT TGGACAAGGTGTATCGGAAGCGCACGGTGCCGGACAACAGCAGCGAAACG AAGTTCATGAGCAACGAGCAGCTGGACAACGAGTTCCAGAACTTGGTGGT GCGGGCTCAGCAAATTCTGCAAATGCCACCCATTGTGCAGATCAAAAAAG ATGTGGAGCGGGTGATAGCCAAGGATACGGCGCTGAAGGACTTCGCCAAC TCCAAGTTCGTATTCACGGACATCACCTTCGGCCGACGGCAGTCGGAACG CAAGGTAATCGTCCGGGATATGGACGGAACCTTGGCCTACGCCACTCTTG ATACCACGAAGCGCATGAACCAGTTGTATTTCCCGCTGGAGGGTCGCCAG TCATATACTCCACGAATGTTCGCGCTGGAGGAGCTGCTGGCCAAGTGCTT GGCGGAGCACAAGTACGAGTTCATCCTGGATCGACTCTTGGTGCAGTACG AGCCACATGAGCCGGAGTTCCACAACATTTCAGCGCGTGTGTTCGAGCAT CTCAACGAGTCCAAGGAGTTCGATCTTCTGCGCTCCACCCGCCACTTTGG ACCCATGGCCTTCTTCTACGCTTGGCACCGCTGCATCGACGACCTGCTGT ATGACATGATCCGTCGGGATTATCTGCACAATGCCGTGGAGCTGATTGCT CTGAGCTACAAGCTACACAACATCCCAGTGGAGTATCAGGCAACGCTGAC CGAACTGGGCAAACTGCATGCCACGCCGGCGGAAAGTGCCCTGGCGGAGC TAAGAAGCGTCTTCCGACGACATGACAATAAGCAGAACATTGAGCAGGAG ATCCATACGGCCATTGGCAAGACGGAGCACGATTTCGCCGCCGATGAGAT CAGCCTGAAGTTCATTGAGCAGTACATCGCCAGCGAACATGCGCTGAAGA AGGTGCAACTGGAGCTGGCGGTGCAGACGCTTAAGGAAGTTAACCGGGAG AAACTGATGCTGTTCCAGGGACTGAAAAAGGCTCACGGCGTCCAGGCTTC GTAGGATCTATTCGCTTTATTGTTATCGATTTCTATGTACTAATAAATAC CAGCTAGGTCAAGATTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpS22-RA | 1340 | mRpS22-RA | 22..1340 | 1..1319 | 6595 | 100 | Plus |
CG33213-RA | 1269 | CG33213-RA | 1197..1269 | 1320..1248 | 365 | 100 | Minus |
CG33221-RA | 1399 | CG33221-RA | 1326..1395 | 1317..1248 | 320 | 97.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 23739891..23741209 | 1..1319 | 6505 | 99.5 | Plus |
chrX | 22417052 | chrX | 3690897..3690966 | 1248..1317 | 320 | 97.1 | Plus |
chrU | 10048995 | chrU | 6016770..6016839 | 1317..1248 | 320 | 97.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CR42196-RA | 1399 | CR42196-RA | 1326..1395 | 1317..1248 | 320 | 97.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 23739891..23741209 | 1..1319 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS22-RA | 1..1182 | 73..1254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS22-RA | 1..1182 | 73..1254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS22-RA | 1..1182 | 73..1254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS22-RA | 1..1182 | 73..1254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS22-RA | 1..1182 | 73..1254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS22-RA | 22..1340 | 1..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS22-RA | 22..1340 | 1..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS22-RA | 22..1340 | 1..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS22-RA | 22..1340 | 1..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS22-RA | 23..1341 | 1..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27916930..27918248 | 1..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27916930..27918248 | 1..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27916930..27918248 | 1..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 23742652..23743970 | 1..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27657761..27659079 | 1..1319 | 100 | Plus |
Translation from 72 to 1253
> GH07821.hyp MHLLRSLRQLNGLQGVRQAIRQVSSAPTKPAALQYERDPQPLFTDAETQR LLQSMTQLNLDKVYRKRTVPDNSSETKFMSNEQLDNEFQNLVVRAQQILQ MPPIVQIKKDVERVIAKDTALKDFANSKFVFTDITFGRRQSERKVIVRDM DGTLAYATLDTTKRMNQLYFPLEGRQSYTPRMFALEELLAKCLAEHKYEF ILDRLLVQYEPHEPEFHNISARVFEHLNESKEFDLLRSTRHFGPMAFFYA WHRCIDDLLYDMIRRDYLHNAVELIALSYKLHNIPVEYQATLTELGKLHA TPAESALAELRSVFRRHDNKQNIEQEIHTAIGKTEHDFAADEISLKFIEQ YIASEHALKKVQLELAVQTLKEVNREKLMLFQGLKKAHGVQAS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpS22-PA | 393 | CG12261-PA | 1..393 | 1..393 | 2005 | 100 | Plus |
Translation from 72 to 1253
> GH07821.pep MHLLRSLRQLNGLQGVRQAIRQVSSAPTKPAALQYERDPQPLFTDAETQR LLQSMTQLNLDKVYRKRTVPDNSSETKFMSNEQLDNEFQNLVVRAQQILQ MPPIVQIKKDVERVIAKDTALKDFANSKFVFTDITFGRRQSERKVIVRDM DGTLAYATLDTTKRMNQLYFPLEGRQSYTPRMFALEELLAKCLAEHKYEF ILDRLLVQYEPHEPEFHNISARVFEHLNESKEFDLLRSTRHFGPMAFFYA WHRCIDDLLYDMIRRDYLHNAVELIALSYKLHNIPVEYQATLTELGKLHA TPAESALAELRSVFRRHDNKQNIEQEIHTAIGKTEHDFAADEISLKFIEQ YIASEHALKKVQLELAVQTLKEVNREKLMLFQGLKKAHGVQAS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16307-PA | 393 | GF16307-PA | 1..393 | 1..393 | 1793 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11579-PA | 393 | GG11579-PA | 1..393 | 1..393 | 1979 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16586-PA | 390 | GH16586-PA | 1..388 | 1..393 | 1463 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpS22-PA | 393 | CG12261-PA | 1..393 | 1..393 | 2005 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22031-PA | 391 | GI22031-PA | 1..391 | 1..393 | 1533 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13721-PA | 393 | GL13721-PA | 1..393 | 1..393 | 1665 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11515-PA | 393 | GA11515-PA | 1..393 | 1..393 | 1658 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16361-PA | 393 | GM16361-PA | 1..393 | 1..393 | 2042 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21355-PA | 393 | GD21355-PA | 1..393 | 1..393 | 2016 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10478-PA | 396 | GJ10478-PA | 1..396 | 1..393 | 1540 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11773-PA | 391 | GK11773-PA | 1..391 | 1..393 | 1489 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23768-PA | 393 | GE23768-PA | 1..393 | 1..393 | 1991 | 94.4 | Plus |