BDGP Sequence Production Resources |
Search the DGRC for GH07879
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 78 |
Well: | 79 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6332-RA |
Protein status: | GH07879.pep: gold |
Preliminary Size: | 1380 |
Sequenced Size: | 1299 |
Gene | Date | Evidence |
---|---|---|
CG6332 | 2001-01-01 | Release 2 assignment |
CG6332 | 2002-03-19 | Blastp of sequenced clone |
CG6332 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6332 | 2008-04-29 | Release 5.5 accounting |
CG6332 | 2008-08-15 | Release 5.9 accounting |
CG6332 | 2008-12-18 | 5.12 accounting |
1299 bp (1299 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094685
> GH07879.complete TTCAGATAATCGTAGATGTTTTTTATCATAAGCGAATAAAAAAGTTAGCA TTAATTGGTTTAAAGTAGTGCGTCAAAATTCGGAAATCCACAGAATGACC ATCCAAGGACTGAAGTGTGACCTCAGCCCGACGGTGACCACTTGTCTGCA GCTGAAGGACTGCGTCCGTCCGGACTGCTGTCCCATCCGGGACCCCATTC CCTACGATGCCGAGTGCTTCGTTAGGGACATTGGCCAGGAGCTGGACAAA CTGACGCGCCGACACGAGCGCATGTTCGTCAAGCGGCGGCGTCTGATGGA AATGGCCATACCCAGGCGACGCACCTGCCGCTTTGTGCCGAAATGCGCCT GCTCATTTCCCAAGTCCATCGAGATGGTGCGACCATGTGACGCCCAGAAT CACACACGCACCGAGCAACTAGCTCTGCCCACGGTCCGTCGATTGCTTCA CAGGCGGCGAACGGCCATTCTGGCGGGCGACTCAATTGGGGAGTCCATAC TGAACAGATGGCTTCGCTACAGCTATCTATCGCTGTACAGTCGTCTCACG AATATCCAGCCGTTGGTTAAGCCGAAGAAAAAGAAGAAGAAGACGGAGAA GCAGCTGGCTAAGCACGAGAAGTACATCGAAAAGTTGGCGAAACCAAAGA AAGCACCAAAGGTCCCGAAACCGGATCGTGGAGCTGGGGAGTTCGATCCC GTGCGTCTCAATCAGCTGGCCAGTCCCAAGGCCTATTTGGAGGAGATCAA ACCCAAGTGGGAGCTGACCTCCCAGATGAAGGACTACAAGGCGACCAAGC GGATCAAGCAAATATCGCAGCCCGTCGTGCGCGATAATGTCCACATCAAC GAGAATCCGGAGAAGGTCTCGCCCAATGCCCTTCGCTACAAGCCGAGTGC CCGCATCAAGGAGATGTCCGAGCCACTTACCACGCGCGATGCCAACCAAG GACTGGCGGATGTCAAGGAGAATCCATTCGGTATCGCGCCAAACGCGCTC AAATACAAGGCGAGCACGCGGATCAAGGAGCTGGCGGAGCCCAAGGAGTT CGAGAACACGCATATCCGGGAGAATCCGTTTGCCATATCGCCGGCGGCTC TGAAGGCCAAAGCCTCGCCACGCCTCATCGAGTTGGCCAAGCCCAAGGGT GGATAATAATTGGAGACGGACGTGGACTGTGCGTCTGGATAATCATTACC GTCCTTATTGGTGTTCTAAGTTTTTCATTTCGGCTACATTTGGTATCGAC TTTTCTAATAAATTTGTTTTTGGTTTTTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6332-RA | 1358 | CG6332-RA | 73..1357 | 1..1285 | 6425 | 100 | Plus |
CG6332.a | 2052 | CG6332.a | 774..2052 | 1..1279 | 6395 | 100 | Plus |
CG6332-RB | 1382 | CG6332-RB | 38..930 | 1..893 | 4465 | 100 | Plus |
CG6332-RB | 1382 | CG6332-RB | 997..1382 | 894..1279 | 1930 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 17838485..17839058 | 1..574 | 2810 | 99.3 | Plus |
chr3R | 27901430 | chr3R | 17839578..17839963 | 894..1279 | 1900 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 17839291..17839511 | 673..893 | 1090 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 17839131..17839231 | 574..674 | 505 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22014734..22015307 | 1..574 | 2870 | 100 | Plus |
3R | 32079331 | 3R | 22015827..22016218 | 894..1285 | 1960 | 100 | Plus |
3R | 32079331 | 3R | 22015540..22015760 | 673..893 | 1105 | 100 | Plus |
3R | 32079331 | 3R | 22015380..22015480 | 574..674 | 505 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 21755565..21756138 | 1..574 | 2870 | 100 | Plus |
3R | 31820162 | 3R | 21756658..21757049 | 894..1285 | 1960 | 100 | Plus |
3R | 31820162 | 3R | 21756371..21756591 | 673..893 | 1105 | 100 | Plus |
3R | 31820162 | 3R | 21756211..21756311 | 574..674 | 505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 17838485..17839058 | 1..574 | 99 | == | Plus |
chr3R | 17839162..17839230 | 605..673 | 100 | -> | Plus |
chr3R | 17839292..17839511 | 674..893 | 99 | -> | Plus |
chr3R | 17839578..17839963 | 894..1279 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6332-RA | 1..1062 | 95..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6332-RA | 1..1062 | 95..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6332-RA | 1..1062 | 95..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6332-RA | 1..1062 | 95..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6332-RA | 1..1062 | 95..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6332-RA | 38..1316 | 1..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6332-RA | 38..1316 | 1..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6332-RA | 38..1316 | 1..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6332-RA | 38..1316 | 1..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6332-RA | 38..1316 | 1..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22015380..22015479 | 574..673 | 100 | -> | Plus |
3R | 22015541..22015760 | 674..893 | 100 | -> | Plus |
3R | 22015827..22016212 | 894..1279 | 100 | Plus | |
3R | 22014734..22015306 | 1..573 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22015380..22015479 | 574..673 | 100 | -> | Plus |
3R | 22015541..22015760 | 674..893 | 100 | -> | Plus |
3R | 22015827..22016212 | 894..1279 | 100 | Plus | |
3R | 22014734..22015306 | 1..573 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22015380..22015479 | 574..673 | 100 | -> | Plus |
3R | 22015541..22015760 | 674..893 | 100 | -> | Plus |
3R | 22015827..22016212 | 894..1279 | 100 | Plus | |
3R | 22014734..22015306 | 1..573 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 17840456..17841028 | 1..573 | 100 | -> | Plus |
arm_3R | 17841102..17841201 | 574..673 | 100 | -> | Plus |
arm_3R | 17841263..17841482 | 674..893 | 100 | -> | Plus |
arm_3R | 17841549..17841934 | 894..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21755565..21756137 | 1..573 | 100 | -> | Plus |
3R | 21756211..21756310 | 574..673 | 100 | -> | Plus |
3R | 21756372..21756591 | 674..893 | 100 | -> | Plus |
3R | 21756658..21757043 | 894..1279 | 100 | Plus |
Translation from 94 to 1155
> GH07879.pep MTIQGLKCDLSPTVTTCLQLKDCVRPDCCPIRDPIPYDAECFVRDIGQEL DKLTRRHERMFVKRRRLMEMAIPRRRTCRFVPKCACSFPKSIEMVRPCDA QNHTRTEQLALPTVRRLLHRRRTAILAGDSIGESILNRWLRYSYLSLYSR LTNIQPLVKPKKKKKKTEKQLAKHEKYIEKLAKPKKAPKVPKPDRGAGEF DPVRLNQLASPKAYLEEIKPKWELTSQMKDYKATKRIKQISQPVVRDNVH INENPEKVSPNALRYKPSARIKEMSEPLTTRDANQGLADVKENPFGIAPN ALKYKASTRIKELAEPKEFENTHIRENPFAISPAALKAKASPRLIELAKP KGG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18061-PA | 353 | GF18061-PA | 1..353 | 1..353 | 1351 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11098-PA | 353 | GG11098-PA | 1..353 | 1..353 | 1679 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20942-PA | 353 | GH20942-PA | 1..352 | 1..353 | 1230 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6332-PA | 353 | CG6332-PA | 1..353 | 1..353 | 1848 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10725-PA | 352 | GI10725-PA | 1..352 | 1..353 | 1111 | 66 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23808-PA | 351 | GL23808-PA | 2..351 | 3..353 | 1174 | 69.8 | Plus |
Dper\GL23726-PA | 208 | GL23726-PA | 41..200 | 164..351 | 150 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19518-PA | 351 | GA19518-PA | 2..351 | 3..353 | 1171 | 69.8 | Plus |
Dpse\GA26718-PA | 294 | GA26718-PA | 111..286 | 145..351 | 156 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26392-PA | 353 | GM26392-PA | 1..353 | 1..353 | 1847 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20913-PA | 353 | GD20913-PA | 1..353 | 1..353 | 1846 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23139-PA | 352 | GJ23139-PA | 1..352 | 1..353 | 1231 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14237-PA | 344 | GK14237-PA | 3..344 | 11..353 | 1181 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10260-PA | 353 | GE10260-PA | 1..353 | 1..353 | 1832 | 98 | Plus |
Translation from 94 to 1155
> GH07879.hyp MTIQGLKCDLSPTVTTCLQLKDCVRPDCCPIRDPIPYDAECFVRDIGQEL DKLTRRHERMFVKRRRLMEMAIPRRRTCRFVPKCACSFPKSIEMVRPCDA QNHTRTEQLALPTVRRLLHRRRTAILAGDSIGESILNRWLRYSYLSLYSR LTNIQPLVKPKKKKKKTEKQLAKHEKYIEKLAKPKKAPKVPKPDRGAGEF DPVRLNQLASPKAYLEEIKPKWELTSQMKDYKATKRIKQISQPVVRDNVH INENPEKVSPNALRYKPSARIKEMSEPLTTRDANQGLADVKENPFGIAPN ALKYKASTRIKELAEPKEFENTHIRENPFAISPAALKAKASPRLIELAKP KGG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6332-PA | 353 | CG6332-PA | 1..353 | 1..353 | 1848 | 100 | Plus |